FFCP PHASE1:Hg19::chr12:772661..772710,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4815|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7825|TSSclassifier=S|UniProt=Q9NZG7|association_with_transcript=44bp_to_NM_016533,uc001qil.2,uc010sds.1_5end|coexpression_cluster_id=C146|description=CAGE_peak_4_at_NINJ2_5end|id=chr12:772661..772710,-|ontology_enrichment_celltype=CL:0000791!1.41e-13!18;CL:0000789!1.41e-13!18;CL:0002420!1.41e-13!18;CL:0002419!1.41e-13!18;CL:0000790!1.41e-13!18;CL:0000084!1.42e-13!25;CL:0000827!1.42e-13!25;CL:0000838!2.14e-11!52;CL:0000542!4.71e-11!53;CL:0000051!4.71e-11!53;CL:0000080!5.19e-10!6;CL:0000625!7.51e-09!11;CL:0000624!1.80e-07!6|ontology_enrichment_celltype_v019=CL:0000791;7.12e-11;18!CL:0000789;7.12e-11;18!CL:0002419;7.12e-11;18!CL:0000084;2.17e-10;25!CL:0000624;2.49e-09;6!CL:0000898;1.02e-08;3!CL:0000895;7.08e-07;1|ontology_enrichment_celltype_v019_2=CL:0000791,5.79e-11,18;CL:0000789,5.79e-11,18;CL:0002420,5.79e-11,18;CL:0002419,5.79e-11,18;CL:0000790,5.79e-11,18;CL:0000084,1.84e-10,25;CL:0000827,1.84e-10,25;CL:0000624,2.16e-09,6;CL:0000898,7.78e-09,3;CL:0000810,4.57e-07,1;CL:0000895,4.57e-07,1;CL:0002436,4.57e-07,1;CL:0002427,4.57e-07,1;CL:0002428,4.57e-07,1;CL:0002429,4.57e-07,1;CL:0002433,4.57e-07,1;CL:0002431,4.57e-07,1;CL:0002432,4.57e-07,1|ontology_enrichment_development_v019=CL:0000790;7.12e-11;18!CL:0002427;7.08e-07;1!UBERON:0006222;7.08e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.28e-35!115;UBERON:0001049!5.91e-22!57;UBERON:0005068!5.91e-22!57;UBERON:0006241!5.91e-22!57;UBERON:0007135!5.91e-22!57;UBERON:0000178!1.24e-16!15;UBERON:0000179!1.24e-16!15;UBERON:0000463!1.24e-16!15;UBERON:0002616!1.70e-16!59;UBERON:0002780!2.32e-16!41;UBERON:0001890!2.32e-16!41;UBERON:0006240!2.32e-16!41;UBERON:0003075!4.55e-16!86;UBERON:0007284!4.55e-16!86;UBERON:0003080!8.27e-16!42;UBERON:0002020!2.02e-15!34;UBERON:0003528!2.02e-15!34;UBERON:0001893!2.11e-15!34;UBERON:0001017!3.96e-15!82;UBERON:0005743!6.60e-15!86;UBERON:0002346!7.13e-15!90;UBERON:0002791!2.04e-14!33;UBERON:0000955!1.04e-13!69;UBERON:0006238!1.04e-13!69;UBERON:0000073!2.39e-13!94;UBERON:0001016!2.39e-13!94;UBERON:0001869!4.53e-13!32;UBERON:0002308!6.34e-10!9;UBERON:0000125!6.34e-10!9;UBERON:0002619!6.93e-10!22;UBERON:0003056!1.04e-09!61;UBERON:0001950!1.09e-09!20;UBERON:0000200!3.84e-09!6;UBERON:0000956!2.43e-08!25;UBERON:0000203!2.43e-08!25;UBERON:0004177!3.66e-08!7;UBERON:0000153!5.42e-08!129;UBERON:0007811!5.42e-08!129;UBERON:0002298!1.52e-07!8;UBERON:0003076!2.08e-07!15;UBERON:0003057!2.08e-07!15;UBERON:0009663!3.26e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;6.40e-18;15!UBERON:0000179;6.40e-18;15!UBERON:0000463;6.40e-18;15!UBERON:0002390;5.79e-10;32!UBERON:0002336;3.20e-07;1!UBERON:0011215;3.20e-07;1!UBERON:0001018;3.20e-07;1!UBERON:0002473;3.20e-07;1!UBERON:0005340;3.20e-07;1!UBERON:0003544;3.20e-07;1!UBERON:0005970;3.20e-07;1!UBERON:0002316;3.20e-07;1!UBERON:0001020;3.20e-07;1!UBERON:0002437;3.20e-07;1!UBERON:0002372;7.08e-07;1!UBERON:0001961;7.08e-07;1!UBERON:0001744;7.08e-07;1!UBERON:0001042;7.08e-07;1!UBERON:0001735;7.08e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.65e-18,15;UBERON:0000179,8.65e-18,15;UBERON:0000463,8.65e-18,15;UBERON:0002336,3.20e-07,1;UBERON:0011215,3.20e-07,1;UBERON:0001018,3.20e-07,1;UBERON:0002473,3.20e-07,1;UBERON:0005340,3.20e-07,1;UBERON:0003544,3.20e-07,1;UBERON:0005970,3.20e-07,1;UBERON:0002316,3.20e-07,1;UBERON:0001020,3.20e-07,1;UBERON:0002437,3.20e-07,1;UBERON:0002372,6.88e-07,1;UBERON:0001961,6.88e-07,1;UBERON:0001744,6.88e-07,1;UBERON:0001735,6.88e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0,0,0,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0,0.786839080455332,0.393010762749165,3.08402248499264,0.668745981562712,0,0,0,3.11949279278486,10.0166008541445,11.5197625183483,12.1861738694257,2.81800903396485,3.25148368899696,0.493313713811028,0.276350017785848,0,0.14828656316206,0,0,1.0197840842781,1.91610246800961,6.8725489096526,1.26509846009751,1.27426165729639,0.651083453856419,1.90090408889675,0.752875595388864,0.639933055772092,0,1.4206635122641,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0.144846518960824,2.3858578411533,1.45990461090791,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.2079708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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7825 | |||
|TSSclassifier=S | |||
|UniProt=Q9NZG7 | |||
|association_with_transcript=44bp_to_NM_016533,uc001qil.2,uc010sds.1_5end | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_4_at_NINJ2_5end | |||
|id=chr12:772661..772710,- | |||
|ontology_enrichment_celltype=CL:0000791!1.41e-13!18;CL:0000789!1.41e-13!18;CL:0002420!1.41e-13!18;CL:0002419!1.41e-13!18;CL:0000790!1.41e-13!18;CL:0000084!1.42e-13!25;CL:0000827!1.42e-13!25;CL:0000838!2.14e-11!52;CL:0000542!4.71e-11!53;CL:0000051!4.71e-11!53;CL:0000080!5.19e-10!6;CL:0000625!7.51e-09!11;CL:0000624!1.80e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.12e-11;18!CL:0000789;7.12e-11;18!CL:0002419;7.12e-11;18!CL:0000084;2.17e-10;25!CL:0000624;2.49e-09;6!CL:0000898;1.02e-08;3!CL:0000895;7.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.79e-11,18;CL:0000789,5.79e-11,18;CL:0002420,5.79e-11,18;CL:0002419,5.79e-11,18;CL:0000790,5.79e-11,18;CL:0000084,1.84e-10,25;CL:0000827,1.84e-10,25;CL:0000624,2.16e-09,6;CL:0000898,7.78e-09,3;CL:0000810,4.57e-07,1;CL:0000895,4.57e-07,1;CL:0002436,4.57e-07,1;CL:0002427,4.57e-07,1;CL:0002428,4.57e-07,1;CL:0002429,4.57e-07,1;CL:0002433,4.57e-07,1;CL:0002431,4.57e-07,1;CL:0002432,4.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;7.12e-11;18!CL:0002427;7.08e-07;1!UBERON:0006222;7.08e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.28e-35!115;UBERON:0001049!5.91e-22!57;UBERON:0005068!5.91e-22!57;UBERON:0006241!5.91e-22!57;UBERON:0007135!5.91e-22!57;UBERON:0000178!1.24e-16!15;UBERON:0000179!1.24e-16!15;UBERON:0000463!1.24e-16!15;UBERON:0002616!1.70e-16!59;UBERON:0002780!2.32e-16!41;UBERON:0001890!2.32e-16!41;UBERON:0006240!2.32e-16!41;UBERON:0003075!4.55e-16!86;UBERON:0007284!4.55e-16!86;UBERON:0003080!8.27e-16!42;UBERON:0002020!2.02e-15!34;UBERON:0003528!2.02e-15!34;UBERON:0001893!2.11e-15!34;UBERON:0001017!3.96e-15!82;UBERON:0005743!6.60e-15!86;UBERON:0002346!7.13e-15!90;UBERON:0002791!2.04e-14!33;UBERON:0000955!1.04e-13!69;UBERON:0006238!1.04e-13!69;UBERON:0000073!2.39e-13!94;UBERON:0001016!2.39e-13!94;UBERON:0001869!4.53e-13!32;UBERON:0002308!6.34e-10!9;UBERON:0000125!6.34e-10!9;UBERON:0002619!6.93e-10!22;UBERON:0003056!1.04e-09!61;UBERON:0001950!1.09e-09!20;UBERON:0000200!3.84e-09!6;UBERON:0000956!2.43e-08!25;UBERON:0000203!2.43e-08!25;UBERON:0004177!3.66e-08!7;UBERON:0000153!5.42e-08!129;UBERON:0007811!5.42e-08!129;UBERON:0002298!1.52e-07!8;UBERON:0003076!2.08e-07!15;UBERON:0003057!2.08e-07!15;UBERON:0009663!3.26e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.40e-18;15!UBERON:0000179;6.40e-18;15!UBERON:0000463;6.40e-18;15!UBERON:0002390;5.79e-10;32!UBERON:0002336;3.20e-07;1!UBERON:0011215;3.20e-07;1!UBERON:0001018;3.20e-07;1!UBERON:0002473;3.20e-07;1!UBERON:0005340;3.20e-07;1!UBERON:0003544;3.20e-07;1!UBERON:0005970;3.20e-07;1!UBERON:0002316;3.20e-07;1!UBERON:0001020;3.20e-07;1!UBERON:0002437;3.20e-07;1!UBERON:0002372;7.08e-07;1!UBERON:0001961;7.08e-07;1!UBERON:0001744;7.08e-07;1!UBERON:0001042;7.08e-07;1!UBERON:0001735;7.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.65e-18,15;UBERON:0000179,8.65e-18,15;UBERON:0000463,8.65e-18,15;UBERON:0002336,3.20e-07,1;UBERON:0011215,3.20e-07,1;UBERON:0001018,3.20e-07,1;UBERON:0002473,3.20e-07,1;UBERON:0005340,3.20e-07,1;UBERON:0003544,3.20e-07,1;UBERON:0005970,3.20e-07,1;UBERON:0002316,3.20e-07,1;UBERON:0001020,3.20e-07,1;UBERON:0002437,3.20e-07,1;UBERON:0002372,6.88e-07,1;UBERON:0001961,6.88e-07,1;UBERON:0001744,6.88e-07,1;UBERON:0001735,6.88e-07,1 | |||
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|short_description=p4@NINJ2 | |||
}} |
Revision as of 00:30, 11 September 2013
Short description: | p4@NINJ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NINJ2_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | 44bp_to_NM_016533, uc001qil.2, uc010sds.1_5end |
EntrezGene: | NINJ2 |
HGNC: | 7825 |
UniProt: | Q9NZG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.79e-11 | 18 |
alpha-beta T cell | 5.79e-11 | 18 |
immature T cell | 5.79e-11 | 18 |
mature T cell | 5.79e-11 | 18 |
immature alpha-beta T cell | 5.79e-11 | 18 |
T cell | 1.84e-10 | 25 |
pro-T cell | 1.84e-10 | 25 |
CD4-positive, alpha-beta T cell | 2.16e-09 | 6 |
naive T cell | 7.78e-09 | 3 |
CD4-positive, alpha-beta thymocyte | 4.57e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.57e-07 | 1 |
mature CD4 single-positive thymocyte | 4.57e-07 | 1 |
resting double-positive thymocyte | 4.57e-07 | 1 |
double-positive blast | 4.57e-07 | 1 |
CD69-positive double-positive thymocyte | 4.57e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 4.57e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.57e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 4.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 8.65e-18 | 15 |
haemolymphatic fluid | 8.65e-18 | 15 |
organism substance | 8.65e-18 | 15 |
corpus callosum | 3.20e-07 | 1 |
central nervous system cell part cluster | 3.20e-07 | 1 |
axon tract | 3.20e-07 | 1 |
intercerebral commissure | 3.20e-07 | 1 |
dorsal telencephalic commissure | 3.20e-07 | 1 |
brain white matter | 3.20e-07 | 1 |
brain commissure | 3.20e-07 | 1 |
white matter | 3.20e-07 | 1 |
nervous system commissure | 3.20e-07 | 1 |
cerebral hemisphere white matter | 3.20e-07 | 1 |
tonsil | 6.88e-07 | 1 |
mucosa-associated lymphoid tissue | 6.88e-07 | 1 |
lymphoid tissue | 6.88e-07 | 1 |
tonsillar ring | 6.88e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.