FFCP PHASE1:Hg19::chr12:70018044..70018079,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C33|description=CAGE_peak_at_chr12:70018044..70018079,+|id=chr12:70018044..70018079,+|ontology_enrichment_celltype=CL:0000764!2.46e-08!2;CL:0000765!2.46e-08!2;CL:0000050!2.46e-08!2;CL:0000038!2.46e-08!2;CL:0000558!2.46e-08!2;CL:0000547!2.46e-08!2;CL:0000549!2.46e-08!2;CL:0000550!2.46e-08!2;CL:0000552!2.46e-08!2|ontology_enrichment_celltype_v019=CL:0000764;7.69e-21;2!CL:0000558;7.69e-21;2|ontology_enrichment_celltype_v019_2=CL:0000764,7.70e-21,2;CL:0000765,7.70e-21,2;CL:0000050,7.70e-21,2;CL:0000038,7.70e-21,2;CL:0000558,7.70e-21,2;CL:0000547,7.70e-21,2;CL:0000549,7.70e-21,2;CL:0000550,7.70e-21,2;CL:0000552,7.70e-21,2|ontology_enrichment_development_v019=UBERON:0004140;3.76e-11;1!UBERON:0010227;1.46e-10;1!UBERON:0010226;1.46e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.97e-37!115;UBERON:0000178!1.89e-21!15;UBERON:0000179!1.89e-21!15;UBERON:0000463!1.89e-21!15;UBERON:0001950!6.06e-15!20;UBERON:0002780!1.52e-14!41;UBERON:0001890!1.52e-14!41;UBERON:0006240!1.52e-14!41;UBERON:0003080!4.04e-14!42;UBERON:0002619!1.90e-13!22;UBERON:0001869!1.77e-12!32;UBERON:0000200!2.22e-12!6;UBERON:0000956!1.22e-11!25;UBERON:0000203!1.22e-11!25;UBERON:0001893!1.33e-11!34;UBERON:0002020!1.53e-11!34;UBERON:0003528!1.53e-11!34;UBERON:0001049!6.69e-11!57;UBERON:0005068!6.69e-11!57;UBERON:0006241!6.69e-11!57;UBERON:0007135!6.69e-11!57;UBERON:0002616!2.08e-10!59;UBERON:0002791!4.10e-10!33;UBERON:0003056!4.53e-10!61;UBERON:0001872!4.99e-10!5;UBERON:0002771!1.95e-09!3;UBERON:0003075!4.16e-09!86;UBERON:0007284!4.16e-09!86;UBERON:0000073!1.22e-08!94;UBERON:0001016!1.22e-08!94;UBERON:0002346!1.65e-08!90;UBERON:0000955!3.26e-08!69;UBERON:0006238!3.26e-08!69;UBERON:0000341!9.55e-08!2;UBERON:0001897!3.49e-07!2;UBERON:0005743!6.97e-07!86;UBERON:0000153!9.03e-07!129;UBERON:0007811!9.03e-07!129|ontology_enrichment_uberon_v019=UBERON:0000178;1.56e-50;15!UBERON:0000179;1.56e-50;15!UBERON:0000463;1.56e-50;15!UBERON:0002390;1.71e-26;32!UBERON:0002193;2.63e-13;42!UBERON:0004151;3.01e-13;3!UBERON:0002084;1.46e-10;1!UBERON:0002079;1.46e-10;1!UBERON:0002146;1.46e-10;1!UBERON:0002082;1.46e-10;1!UBERON:0005623;1.46e-10;1!UBERON:0007100;3.18e-09;25!UBERON:0000948;5.17e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.52e-50,15;UBERON:0000179,1.52e-50,15;UBERON:0000463,1.52e-50,15;UBERON:0007023,1.81e-21,114;UBERON:0001009,2.16e-14,112;UBERON:0004151,2.49e-13,3;UBERON:0004535,1.05e-12,109;UBERON:0002079,1.21e-10,1;UBERON:0002084,1.33e-10,1;UBERON:0002082,1.33e-10,1;UBERON:0010226,1.33e-10,1;UBERON:0002146,1.46e-10,1;UBERON:0005623,1.46e-10,1;UBERON:0007100,1.52e-08,27;UBERON:0002390,3.17e-08,98;UBERON:0003061,3.17e-08,98;UBERON:0002193,2.47e-07,108;UBERON:0003081,6.95e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.5897382896845,28.7578996127391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,14.2085330585007,15.2927441428475,7.97506062043828,2.62054953003568,3.70226045777575,10.3755729790835,11.8806916192385,8.72437693923697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0.588187602953219,0.335643173951685,0.569261198172555,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.14580212005842,0,0,0.429226048136571,1.11585728720936,12.5633093550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.157363764404994,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0,5.30027555648885,0.129282956361551,0,0,0,0.106787412567695,2.04365596629566,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_at_chr12:70018044..70018079,+ | |||
|id=chr12:70018044..70018079,+ | |||
|ontology_enrichment_celltype=CL:0000764!2.46e-08!2;CL:0000765!2.46e-08!2;CL:0000050!2.46e-08!2;CL:0000038!2.46e-08!2;CL:0000558!2.46e-08!2;CL:0000547!2.46e-08!2;CL:0000549!2.46e-08!2;CL:0000550!2.46e-08!2;CL:0000552!2.46e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;7.69e-21;2!CL:0000558;7.69e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.70e-21,2;CL:0000765,7.70e-21,2;CL:0000050,7.70e-21,2;CL:0000038,7.70e-21,2;CL:0000558,7.70e-21,2;CL:0000547,7.70e-21,2;CL:0000549,7.70e-21,2;CL:0000550,7.70e-21,2;CL:0000552,7.70e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.76e-11;1!UBERON:0010227;1.46e-10;1!UBERON:0010226;1.46e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.97e-37!115;UBERON:0000178!1.89e-21!15;UBERON:0000179!1.89e-21!15;UBERON:0000463!1.89e-21!15;UBERON:0001950!6.06e-15!20;UBERON:0002780!1.52e-14!41;UBERON:0001890!1.52e-14!41;UBERON:0006240!1.52e-14!41;UBERON:0003080!4.04e-14!42;UBERON:0002619!1.90e-13!22;UBERON:0001869!1.77e-12!32;UBERON:0000200!2.22e-12!6;UBERON:0000956!1.22e-11!25;UBERON:0000203!1.22e-11!25;UBERON:0001893!1.33e-11!34;UBERON:0002020!1.53e-11!34;UBERON:0003528!1.53e-11!34;UBERON:0001049!6.69e-11!57;UBERON:0005068!6.69e-11!57;UBERON:0006241!6.69e-11!57;UBERON:0007135!6.69e-11!57;UBERON:0002616!2.08e-10!59;UBERON:0002791!4.10e-10!33;UBERON:0003056!4.53e-10!61;UBERON:0001872!4.99e-10!5;UBERON:0002771!1.95e-09!3;UBERON:0003075!4.16e-09!86;UBERON:0007284!4.16e-09!86;UBERON:0000073!1.22e-08!94;UBERON:0001016!1.22e-08!94;UBERON:0002346!1.65e-08!90;UBERON:0000955!3.26e-08!69;UBERON:0006238!3.26e-08!69;UBERON:0000341!9.55e-08!2;UBERON:0001897!3.49e-07!2;UBERON:0005743!6.97e-07!86;UBERON:0000153!9.03e-07!129;UBERON:0007811!9.03e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.56e-50;15!UBERON:0000179;1.56e-50;15!UBERON:0000463;1.56e-50;15!UBERON:0002390;1.71e-26;32!UBERON:0002193;2.63e-13;42!UBERON:0004151;3.01e-13;3!UBERON:0002084;1.46e-10;1!UBERON:0002079;1.46e-10;1!UBERON:0002146;1.46e-10;1!UBERON:0002082;1.46e-10;1!UBERON:0005623;1.46e-10;1!UBERON:0007100;3.18e-09;25!UBERON:0000948;5.17e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.52e-50,15;UBERON:0000179,1.52e-50,15;UBERON:0000463,1.52e-50,15;UBERON:0007023,1.81e-21,114;UBERON:0001009,2.16e-14,112;UBERON:0004151,2.49e-13,3;UBERON:0004535,1.05e-12,109;UBERON:0002079,1.21e-10,1;UBERON:0002084,1.33e-10,1;UBERON:0002082,1.33e-10,1;UBERON:0010226,1.33e-10,1;UBERON:0002146,1.46e-10,1;UBERON:0005623,1.46e-10,1;UBERON:0007100,1.52e-08,27;UBERON:0002390,3.17e-08,98;UBERON:0003061,3.17e-08,98;UBERON:0002193,2.47e-07,108;UBERON:0003081,6.95e-07,203 | |||
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|short_description=p@chr12:70018044..70018079,+ | |||
}} |
Revision as of 00:13, 11 September 2013
Short description: | p@chr12:70018044..70018079, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:70018044..70018079, + |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.70e-21 | 2 |
erythroblast | 7.70e-21 | 2 |
megakaryocyte-erythroid progenitor cell | 7.70e-21 | 2 |
erythroid progenitor cell | 7.70e-21 | 2 |
reticulocyte | 7.70e-21 | 2 |
proerythroblast | 7.70e-21 | 2 |
basophilic erythroblast | 7.70e-21 | 2 |
polychromatophilic erythroblast | 7.70e-21 | 2 |
orthochromatic erythroblast | 7.70e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.52e-50 | 15 |
haemolymphatic fluid | 1.52e-50 | 15 |
organism substance | 1.52e-50 | 15 |
adult organism | 1.81e-21 | 114 |
circulatory system | 2.16e-14 | 112 |
cardiac chamber | 2.49e-13 | 3 |
cardiovascular system | 1.05e-12 | 109 |
left cardiac atrium | 1.21e-10 | 1 |
heart left ventricle | 1.33e-10 | 1 |
cardiac ventricle | 1.33e-10 | 1 |
future cardiac ventricle | 1.33e-10 | 1 |
pulmonary valve | 1.46e-10 | 1 |
semi-lunar valve | 1.46e-10 | 1 |
primary circulatory organ | 1.52e-08 | 27 |
hematopoietic system | 3.17e-08 | 98 |
blood island | 3.17e-08 | 98 |
hemolymphoid system | 2.47e-07 | 108 |
lateral plate mesoderm | 6.95e-07 | 203 |
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