FFCP PHASE1:Hg19::chr12:72080171..72080193,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55266|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25605|TSSclassifier=S|UniProt=|association_with_transcript=-82bp_to_ENST00000549735_5end|coexpression_cluster_id=C47|description=CAGE_peak_4_at_TMEM19_5end|id=chr12:72080171..72080193,+|ontology_enrichment_celltype=CL:0000236!3.50e-08!14;CL:0000945!1.38e-07!24;CL:0000826!1.38e-07!24|ontology_enrichment_celltype_v019=CL:0000236;2.65e-10;13!CL:0000945;3.21e-08;24|ontology_enrichment_celltype_v019_2=CL:0000236,5.76e-11,14;CL:0000945,1.14e-08,24;CL:0000826,1.14e-08,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.01e-19!115;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0002616!6.17e-07!59|ontology_enrichment_uberon_v019=UBERON:0007023;2.50e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.25e-23,114;UBERON:0001049,3.56e-09,56;UBERON:0005068,3.56e-09,56;UBERON:0006241,3.56e-09,56;UBERON:0007135,3.56e-09,56;UBERON:0000073,4.35e-08,53;UBERON:0002616,4.35e-08,53|phase1_expression=1.45342703416445,0.856402095563933,2.39622486963151,2.00146596706261,0.446961094427288,0.872338524100369,0,1.89515962028049,0.261185628199839,0.491467873003018,0,0.873765488520689,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0.730310090387373,1.46379839637152,0,0.204000691244253,0,1.14494394852423,0.958120975510189,0.753255837568817,0.229240217243854,0.57470412614962,0.708397031823113,1.57345710739562,0.767658796194425,0,0,1.8072355126695,0.369754010166788,2.01414721508784,0.426507697462265,0.293600439334847,4.43196326825502,2.00544447470142,2.17010870715852,1.11957737119962,1.6194683300949,1.28787783817093,0.436194716338694,0,0,0,0,0,0.28769239232215,0.256160706529101,1.6553756092201,0.689491361473237,0.645484683583826,0,0,0,0.449446968890169,0.612167784741805,0.641858054152187,0,0.659702600373432,0.797854630486527,0.426224750532694,0.290209238628584,0,0.622822248995575,0,1.5644487552606,0.868755378820466,1.21079900526674,1.84138817993782,0.949387162322653,1.05627643155971,1.70083439972035,1.67726916406701,0.112328631146495,0.600707571366025,0.803627933485401,1.71007646244749,0.19891667719909,1.82664153764634,12.3197371122926,13.6534652815533,14.2321480618169,10.6682555641627,14.0138595462604,17.2425731986345,20.4923910563307,13.3567525634951,2.27685187643779,5.28513470433845,1.91136614062614,2.64342657158052,0.560508562981536,0.263384084775077,0,0.786021525498329,0.205601498999509,1.5046784585161,0,0.473447805734733,0,1.00269411196656,0.589211814949674,1.10766947291811,1.08321545506006,1.15282187753108,0.650296737799391,0.657751618414705,0,0.869409257205157,0.444859689486181,0.267540828089713,0,1.13309342697566,1.14966148080576,0.68725489096526,0.506039384039006,0.637130828648193,1.30216690771284,1.90090408889675,0.903450714466637,1.4078527226986,2.49861453104692,1.18388626022008,2.46338399076314,0.201606743224732,0,1.01377082717959,0,0.670700859703636,1.15076305659177,1.0843174571537,1.00267582127178,0.434539556882471,1.5905718941022,0.486634870302636,0.567208902984407,0,0.614843499851882,1.63723844372141,0,1.85392221392215,2.27183175558278,1.39303789839414,1.59549552622638,3.81584998888547,6.29194401858141,4.45749001595478,0.198762407366705,0,0.347140501607594,0.56530794192401,0.838998872419812,0,0.626984899610432,1.55050055501597,1.06729878806013,0.66944122552934,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.625098097988558,0.673588117878509,0.450445921933289,0,0,0.366403487860815,2.63560834872127,0,0.436094052142534,6.95760732373446,0.506522046658319,0.794455084879313,1.14734648299525,0.354668382198357,0,0,0.24666754841716,0.933633106199299,1.48181739276657,1.47115712802113,0.756787138224657,1.15235184896,0.234321431833797,0.624320153660641,0,0.448346041655403,0.23486899728753,0.809364721840658,0.702254033511242,0.61246251376468,0.245668634623536,0.826606249406124,2.37600571456411,0.494533858557114,0,0.718618141816238,0.673344455816265,0.750711119231785,0.277064115484183,0,0,0.300476117813194,1.02088964844019,0.89694817844431,1.2813443329114,0.211931901159562,0.600182192168805,0.515262646192195,0.772921620136887,1.48893485065272,0.506328996723799,0.779496041289589,0.252433774244115,0.552299391853796,0.646584227275248,0.355009592516614,0.806016785821122,0.67824236924195,1.54608682530637,1.63647672354501,0.286804595389004,0.121973706129595,0,0.232387885739037,0.310983165046111,0,0,0,0,0,0.464367928031979,0.721879481669586,1.0647612003586,0.337169380156203,0.241011029883482,0.772057809126758,0.217879444092406,0.71181185733329,0.404493924480493,0.784885860501384,0,0.738155454624648,0,0,0,0,1.96565443335525,0,0,0.614942192715568,0.171567810298526,1.42675371031213,0,0.402115889646523,1.20364978706088,0,0,0,1.27523445472584,0.117408694235822,1.15493158208859,0.462985512576611,1.141524913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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25605 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-82bp_to_ENST00000549735_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_TMEM19_5end | |||
|id=chr12:72080171..72080193,+ | |||
|ontology_enrichment_celltype=CL:0000236!3.50e-08!14;CL:0000945!1.38e-07!24;CL:0000826!1.38e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.65e-10;13!CL:0000945;3.21e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.76e-11,14;CL:0000945,1.14e-08,24;CL:0000826,1.14e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.01e-19!115;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0002616!6.17e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.50e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.25e-23,114;UBERON:0001049,3.56e-09,56;UBERON:0005068,3.56e-09,56;UBERON:0006241,3.56e-09,56;UBERON:0007135,3.56e-09,56;UBERON:0000073,4.35e-08,53;UBERON:0002616,4.35e-08,53 | |||
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| |||
|short_description=p4@TMEM19 | |||
}} |
Revision as of 00:22, 11 September 2013
Short description: | p4@TMEM19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TMEM19_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -82bp_to_ENST00000549735_5end |
EntrezGene: | TMEM19 |
HGNC: | 25605 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.76e-11 | 14 |
lymphocyte of B lineage | 1.14e-08 | 24 |
pro-B cell | 1.14e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.25e-23 | 114 |
neural tube | 3.56e-09 | 56 |
neural rod | 3.56e-09 | 56 |
future spinal cord | 3.56e-09 | 56 |
neural keel | 3.56e-09 | 56 |
regional part of nervous system | 4.35e-08 | 53 |
regional part of brain | 4.35e-08 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.