FFCP PHASE1:Hg19::chr14:21510433..21510440,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84659|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19278|TSSclassifier=S|UniProt=|association_with_transcript=-34bp_to_ENST00000481538_5end|coexpression_cluster_id=C3405|description=CAGE_peak_4_at_RNASE7_5end|id=chr14:21510433..21510440,+|ontology_enrichment_celltype=CL:0002076!7.69e-29!43;CL:0000223!1.13e-21!59;CL:0002159!1.03e-19!13;CL:0000066!1.62e-19!254;CL:0002251!1.38e-16!21;CL:0002368!1.89e-15!13;CL:0000244!6.27e-15!4;CL:0000731!6.27e-15!4;CL:0000076!9.10e-13!62;CL:0002621!2.65e-11!3;CL:0000622!7.67e-11!5;CL:0002541!1.06e-10!3;CL:0000068!1.21e-10!3;CL:0000069!1.21e-10!3;CL:0000307!1.21e-10!3;CL:0000377!1.21e-10!3;CL:0000362!1.26e-10!8;CL:0000240!3.31e-09!6;CL:0000311!3.31e-09!6;CL:0000079!3.31e-09!6;CL:0000237!3.31e-09!6;CL:0000036!3.31e-09!6;CL:0000357!3.31e-09!6;CL:0000114!3.31e-09!6;CL:0000154!4.86e-09!6;CL:0002327!1.76e-08!4;CL:0002077!2.07e-08!33;CL:0000317!6.95e-08!2;CL:1000448!6.95e-08!2;CL:0002308!6.95e-08!2;CL:0002140!6.95e-08!2;CL:0000575!1.90e-07!2;CL:0000312!9.11e-07!5|ontology_enrichment_celltype_v019=CL:0000244;1.33e-31;4!CL:0000731;1.33e-31;4!CL:0002621;1.85e-23;3!CL:0002327;9.34e-18;4!CL:0002076;4.82e-15;42!CL:0002159;1.04e-13;14!CL:0002166;3.25e-11;3!CL:0002231;3.25e-11;3!CL:0002368;1.82e-09;13!CL:0000362;2.35e-08;9!CL:0000312;3.85e-07;5|ontology_enrichment_celltype_v019_2=CL:0000244,9.73e-32,4;CL:0000731,9.73e-32,4;CL:0002621,1.59e-23,3;CL:0002327,1.32e-17,4;CL:0002076,2.19e-16,42;CL:0000066,4.75e-15,253;CL:0002159,1.03e-13,14;CL:0000223,1.98e-11,58;CL:0002231,2.93e-11,3;CL:0002166,4.42e-11,3;CL:0002368,1.78e-09,13;CL:0000362,1.99e-08,9;CL:0002077,9.26e-08,34;CL:0000312,3.16e-07,5|ontology_enrichment_development_v019=CL:0000223;4.54e-07;58|ontology_enrichment_disease=DOID:1749!1.51e-21!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000365!8.68e-18!5;UBERON:0005910!9.22e-15!6;UBERON:0000166!1.31e-13!21;UBERON:0001004!3.61e-13!72;UBERON:0000161!5.30e-13!35;UBERON:0000344!4.32e-12!12;UBERON:0004119!7.49e-12!169;UBERON:0000925!7.49e-12!169;UBERON:0006595!7.49e-12!169;UBERON:0000165!9.11e-12!28;UBERON:0000930!9.11e-12!28;UBERON:0001949!2.65e-11!3;UBERON:0000476!1.06e-10!3;UBERON:0000920!1.06e-10!3;UBERON:0003729!1.58e-10!5;UBERON:0003102!4.54e-10!95;UBERON:0001444!1.62e-08!48;UBERON:0001911!1.76e-08!4;UBERON:0005333!1.76e-08!4;UBERON:0008425!1.76e-08!4;UBERON:0005311!1.76e-08!4;UBERON:0002419!6.95e-08!2;UBERON:0007771!6.95e-08!2;UBERON:0003297!6.95e-08!2;UBERON:0001821!6.95e-08!2;UBERON:0003487!6.95e-08!2;UBERON:0001820!6.95e-08!2;UBERON:0005089!6.95e-08!2;UBERON:0005088!6.95e-08!2;UBERON:0003343!6.96e-08!4;UBERON:0004785!6.96e-08!4;UBERON:0003124!1.11e-07!7;UBERON:0000065!1.74e-07!53;UBERON:0006562!9.60e-07!11|ontology_enrichment_uberon_v019=UBERON:0000486;8.26e-31;12!UBERON:0000365;2.40e-25;5!UBERON:0001949;1.85e-23;3!UBERON:0005910;3.60e-21;6!UBERON:0001911;9.34e-18;4!UBERON:0003929;2.19e-10;7!UBERON:0003729;1.45e-09;13!UBERON:0003350;3.76e-09;8!UBERON:0001828;3.76e-09;8!UBERON:0010371;8.86e-09;31!UBERON:0001708;1.25e-08;4!UBERON:0008895;1.25e-08;4!UBERON:0005911;1.96e-07;36!UBERON:0011159;4.56e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.87e-25,5;UBERON:0001949,1.59e-23,3;UBERON:0005910,2.93e-21,6;UBERON:0001911,1.32e-17,4;UBERON:0005333,1.32e-17,4;UBERON:0008425,1.32e-17,4;UBERON:0005311,1.32e-17,4;UBERON:0003729,1.56e-09,13;UBERON:0003350,3.56e-09,8;UBERON:0001828,3.56e-09,8;UBERON:0000076,4.46e-09,8;UBERON:0001708,1.58e-08,4;UBERON:0008895,1.58e-08,4;UBERON:0003102,1.70e-07,99;UBERON:0000161,3.80e-07,36;UBERON:0011159,5.48e-07,5;UBERON:0004119,9.29e-07,160;UBERON:0000925,9.29e-07,160;UBERON:0006595,9.29e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.36373060295417,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97550513735526,3.37205259772859,0.301586917234893,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01578553838631,1.13420077793909,1.07470227243418,1.16253575405585,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,2.3941057123333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,1.15314040419064,1.53135254993501,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19278 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENST00000481538_5end | |||
|coexpression_cluster_id=C3405 | |||
|description=CAGE_peak_4_at_RNASE7_5end | |||
|id=chr14:21510433..21510440,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.69e-29!43;CL:0000223!1.13e-21!59;CL:0002159!1.03e-19!13;CL:0000066!1.62e-19!254;CL:0002251!1.38e-16!21;CL:0002368!1.89e-15!13;CL:0000244!6.27e-15!4;CL:0000731!6.27e-15!4;CL:0000076!9.10e-13!62;CL:0002621!2.65e-11!3;CL:0000622!7.67e-11!5;CL:0002541!1.06e-10!3;CL:0000068!1.21e-10!3;CL:0000069!1.21e-10!3;CL:0000307!1.21e-10!3;CL:0000377!1.21e-10!3;CL:0000362!1.26e-10!8;CL:0000240!3.31e-09!6;CL:0000311!3.31e-09!6;CL:0000079!3.31e-09!6;CL:0000237!3.31e-09!6;CL:0000036!3.31e-09!6;CL:0000357!3.31e-09!6;CL:0000114!3.31e-09!6;CL:0000154!4.86e-09!6;CL:0002327!1.76e-08!4;CL:0002077!2.07e-08!33;CL:0000317!6.95e-08!2;CL:1000448!6.95e-08!2;CL:0002308!6.95e-08!2;CL:0002140!6.95e-08!2;CL:0000575!1.90e-07!2;CL:0000312!9.11e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.33e-31;4!CL:0000731;1.33e-31;4!CL:0002621;1.85e-23;3!CL:0002327;9.34e-18;4!CL:0002076;4.82e-15;42!CL:0002159;1.04e-13;14!CL:0002166;3.25e-11;3!CL:0002231;3.25e-11;3!CL:0002368;1.82e-09;13!CL:0000362;2.35e-08;9!CL:0000312;3.85e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,9.73e-32,4;CL:0000731,9.73e-32,4;CL:0002621,1.59e-23,3;CL:0002327,1.32e-17,4;CL:0002076,2.19e-16,42;CL:0000066,4.75e-15,253;CL:0002159,1.03e-13,14;CL:0000223,1.98e-11,58;CL:0002231,2.93e-11,3;CL:0002166,4.42e-11,3;CL:0002368,1.78e-09,13;CL:0000362,1.99e-08,9;CL:0002077,9.26e-08,34;CL:0000312,3.16e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;4.54e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.51e-21!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!8.68e-18!5;UBERON:0005910!9.22e-15!6;UBERON:0000166!1.31e-13!21;UBERON:0001004!3.61e-13!72;UBERON:0000161!5.30e-13!35;UBERON:0000344!4.32e-12!12;UBERON:0004119!7.49e-12!169;UBERON:0000925!7.49e-12!169;UBERON:0006595!7.49e-12!169;UBERON:0000165!9.11e-12!28;UBERON:0000930!9.11e-12!28;UBERON:0001949!2.65e-11!3;UBERON:0000476!1.06e-10!3;UBERON:0000920!1.06e-10!3;UBERON:0003729!1.58e-10!5;UBERON:0003102!4.54e-10!95;UBERON:0001444!1.62e-08!48;UBERON:0001911!1.76e-08!4;UBERON:0005333!1.76e-08!4;UBERON:0008425!1.76e-08!4;UBERON:0005311!1.76e-08!4;UBERON:0002419!6.95e-08!2;UBERON:0007771!6.95e-08!2;UBERON:0003297!6.95e-08!2;UBERON:0001821!6.95e-08!2;UBERON:0003487!6.95e-08!2;UBERON:0001820!6.95e-08!2;UBERON:0005089!6.95e-08!2;UBERON:0005088!6.95e-08!2;UBERON:0003343!6.96e-08!4;UBERON:0004785!6.96e-08!4;UBERON:0003124!1.11e-07!7;UBERON:0000065!1.74e-07!53;UBERON:0006562!9.60e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;8.26e-31;12!UBERON:0000365;2.40e-25;5!UBERON:0001949;1.85e-23;3!UBERON:0005910;3.60e-21;6!UBERON:0001911;9.34e-18;4!UBERON:0003929;2.19e-10;7!UBERON:0003729;1.45e-09;13!UBERON:0003350;3.76e-09;8!UBERON:0001828;3.76e-09;8!UBERON:0010371;8.86e-09;31!UBERON:0001708;1.25e-08;4!UBERON:0008895;1.25e-08;4!UBERON:0005911;1.96e-07;36!UBERON:0011159;4.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.87e-25,5;UBERON:0001949,1.59e-23,3;UBERON:0005910,2.93e-21,6;UBERON:0001911,1.32e-17,4;UBERON:0005333,1.32e-17,4;UBERON:0008425,1.32e-17,4;UBERON:0005311,1.32e-17,4;UBERON:0003729,1.56e-09,13;UBERON:0003350,3.56e-09,8;UBERON:0001828,3.56e-09,8;UBERON:0000076,4.46e-09,8;UBERON:0001708,1.58e-08,4;UBERON:0008895,1.58e-08,4;UBERON:0003102,1.70e-07,99;UBERON:0000161,3.80e-07,36;UBERON:0011159,5.48e-07,5;UBERON:0004119,9.29e-07,160;UBERON:0000925,9.29e-07,160;UBERON:0006595,9.29e-07,160 | |||
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|short_description=p4@RNASE7 | |||
}} |
Revision as of 03:43, 11 September 2013
Short description: | p4@RNASE7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RNASE7_5end |
Coexpression cluster: | C3405_squamous_Urothelial_Mallassezderived_Sebocyte_Gingival_Small_Prostate |
Association with transcript: | -34bp_to_ENST00000481538_5end |
EntrezGene: | RNASE7 |
HGNC: | 19278 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 9.73e-32 | 4 |
urothelial cell | 9.73e-32 | 4 |
gingival epithelial cell | 1.59e-23 | 3 |
mammary gland epithelial cell | 1.32e-17 | 4 |
endo-epithelial cell | 2.19e-16 | 42 |
epithelial cell | 4.75e-15 | 253 |
general ecto-epithelial cell | 1.03e-13 | 14 |
endodermal cell | 1.98e-11 | 58 |
epithelial cell of prostate | 2.93e-11 | 3 |
epithelial cell of Malassez | 4.42e-11 | 3 |
respiratory epithelial cell | 1.78e-09 | 13 |
epidermal cell | 1.99e-08 | 9 |
ecto-epithelial cell | 9.26e-08 | 34 |
keratinocyte | 3.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.87e-25 | 5 |
gingival epithelium | 1.59e-23 | 3 |
transitional epithelium | 2.93e-21 | 6 |
mammary gland | 1.32e-17 | 4 |
mammary bud | 1.32e-17 | 4 |
mammary ridge | 1.32e-17 | 4 |
mammary placode | 1.32e-17 | 4 |
mouth mucosa | 1.56e-09 | 13 |
epithelium of mucosa | 3.56e-09 | 8 |
gingiva | 3.56e-09 | 8 |
external ectoderm | 4.46e-09 | 8 |
jaw skeleton | 1.58e-08 | 4 |
splanchnocranium | 1.58e-08 | 4 |
surface structure | 1.70e-07 | 99 |
orifice | 3.80e-07 | 36 |
primary subdivision of cranial skeletal system | 5.48e-07 | 5 |
endoderm-derived structure | 9.29e-07 | 160 |
endoderm | 9.29e-07 | 160 |
presumptive endoderm | 9.29e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.