FFCP PHASE1:Hg19::chr14:50443908..50443920,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1103|description=CAGE_peak_at_chr14:50443908..50443920,+|id=chr14:50443908..50443920,+|ontology_enrichment_celltype=CL:0000738!2.15e-47!140;CL:0002087!1.72e-46!119;CL:0002031!2.15e-43!124;CL:0000037!8.84e-40!172;CL:0000566!8.84e-40!172;CL:0002032!1.55e-38!165;CL:0000837!1.55e-38!165;CL:0000988!3.46e-36!182;CL:0000838!3.43e-30!52;CL:0000542!2.20e-29!53;CL:0000051!2.20e-29!53;CL:0000945!7.93e-20!24;CL:0000826!7.93e-20!24;CL:0000791!2.16e-15!18;CL:0000789!2.16e-15!18;CL:0002420!2.16e-15!18;CL:0002419!2.16e-15!18;CL:0000790!2.16e-15!18;CL:0002009!2.54e-15!65;CL:0000557!2.63e-15!71;CL:0002194!5.18e-15!63;CL:0000576!5.18e-15!63;CL:0000040!5.18e-15!63;CL:0000559!5.18e-15!63;CL:0002057!6.61e-15!42;CL:0000839!1.24e-14!70;CL:0000766!1.36e-14!76;CL:0000236!7.18e-14!14;CL:0000860!2.04e-13!45;CL:0000763!3.79e-13!112;CL:0000049!3.79e-13!112;CL:0000084!3.69e-11!25;CL:0000827!3.69e-11!25;CL:0000625!1.11e-09!11;CL:0000624!1.06e-08!6;CL:0000134!3.14e-07!358;CL:0002320!9.84e-07!365|ontology_enrichment_celltype_v019=CL:0000236;7.71e-30;13!CL:0000945;1.80e-27;24!CL:0000542;1.80e-18;53!CL:0000791;6.48e-12;18!CL:0000789;6.48e-12;18!CL:0002419;6.48e-12;18!CL:0000624;3.93e-08;6!CL:0000084;4.04e-08;25|ontology_enrichment_celltype_v019_2=CL:0000838,6.04e-29,52;CL:0000542,2.82e-28,53;CL:0000051,2.82e-28,53;CL:0000945,1.65e-27,24;CL:0000826,1.65e-27,24;CL:0000236,1.66e-27,14;CL:0000738,6.60e-20,136;CL:0002087,4.84e-19,115;CL:0002031,5.93e-18,120;CL:0000037,1.98e-14,168;CL:0002032,2.16e-14,161;CL:0000837,2.16e-14,161;CL:0000988,2.98e-13,177;CL:0000791,7.92e-12,18;CL:0000789,7.92e-12,18;CL:0002420,7.92e-12,18;CL:0002419,7.92e-12,18;CL:0000790,7.92e-12,18;CL:0000624,4.38e-08,6;CL:0000084,4.63e-08,25;CL:0000827,4.63e-08,25|ontology_enrichment_development_v019=CL:0000051;1.80e-18;53!CL:0000790;6.48e-12;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.67e-22!102;UBERON:0003061!3.67e-22!102;UBERON:0002193!3.08e-21!112;UBERON:0002371!1.83e-12!80;UBERON:0001474!6.32e-11!86;UBERON:0002405!1.06e-10!115;UBERON:0000178!1.15e-08!15;UBERON:0000179!1.15e-08!15;UBERON:0000463!1.15e-08!15;UBERON:0004765!5.86e-08!101;UBERON:0001434!5.86e-08!101|ontology_enrichment_uberon_v019=UBERON:0000178;2.23e-11;15!UBERON:0000179;2.23e-11;15!UBERON:0000463;2.23e-11;15!UBERON:0002390;3.65e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.92e-11,15;UBERON:0000179,1.92e-11,15;UBERON:0000463,1.92e-11,15;UBERON:0002193,7.08e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0,5.88750724410292,1.13735385989937,0,0,0.200544447470142,0,1.11957737119962,0.647787332037959,0.515151135268373,0.726991193897824,2.64513160582167,1.69808842831471,0.929716147622738,0.411167888021826,0,0,0.768482119587302,0.709446689665756,0.344745680736619,0,0,0.941211697713023,0.545812300115692,0.224723484445085,0.918251677112708,0.320929027076094,1.27867425159808,0,1.39624560335142,0,0,0,0,0,1.0429658368404,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.59675003159727,0,10.5597746676794,8.7382177801941,6.22656477704488,7.68114400619713,10.8106916499723,6.32227683949932,9.91567309177293,4.77026877267682,5.69212969109448,3.52342313622563,5.73409842187843,0,0,0,1.180258620683,1.57204305099666,1.43921049299656,13.3749196312542,0.32592226663359,1.89379122293893,0,6.12757512868455,0.294605907474837,2.43687284041983,2.97884250141517,5.89220070738106,4.29195846947598,6.41307827954337,6.07970039128866,5.21645554323094,0.593146252648242,1.33770414044857,3.1360657141493,5.89208582027344,3.83220493601921,2.74901956386104,4.30133476433155,1.27426165729639,2.60433381542567,0,0.451725357233318,2.55973222308837,1.24930726552346,2.60454977248419,0.821127996921047,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,0.234004265139238,0.445893486866185,0,0,0,0,0,0,1.47798971368783,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1103 | |||
|description=CAGE_peak_at_chr14:50443908..50443920,+ | |||
|id=chr14:50443908..50443920,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.15e-47!140;CL:0002087!1.72e-46!119;CL:0002031!2.15e-43!124;CL:0000037!8.84e-40!172;CL:0000566!8.84e-40!172;CL:0002032!1.55e-38!165;CL:0000837!1.55e-38!165;CL:0000988!3.46e-36!182;CL:0000838!3.43e-30!52;CL:0000542!2.20e-29!53;CL:0000051!2.20e-29!53;CL:0000945!7.93e-20!24;CL:0000826!7.93e-20!24;CL:0000791!2.16e-15!18;CL:0000789!2.16e-15!18;CL:0002420!2.16e-15!18;CL:0002419!2.16e-15!18;CL:0000790!2.16e-15!18;CL:0002009!2.54e-15!65;CL:0000557!2.63e-15!71;CL:0002194!5.18e-15!63;CL:0000576!5.18e-15!63;CL:0000040!5.18e-15!63;CL:0000559!5.18e-15!63;CL:0002057!6.61e-15!42;CL:0000839!1.24e-14!70;CL:0000766!1.36e-14!76;CL:0000236!7.18e-14!14;CL:0000860!2.04e-13!45;CL:0000763!3.79e-13!112;CL:0000049!3.79e-13!112;CL:0000084!3.69e-11!25;CL:0000827!3.69e-11!25;CL:0000625!1.11e-09!11;CL:0000624!1.06e-08!6;CL:0000134!3.14e-07!358;CL:0002320!9.84e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.71e-30;13!CL:0000945;1.80e-27;24!CL:0000542;1.80e-18;53!CL:0000791;6.48e-12;18!CL:0000789;6.48e-12;18!CL:0002419;6.48e-12;18!CL:0000624;3.93e-08;6!CL:0000084;4.04e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.04e-29,52;CL:0000542,2.82e-28,53;CL:0000051,2.82e-28,53;CL:0000945,1.65e-27,24;CL:0000826,1.65e-27,24;CL:0000236,1.66e-27,14;CL:0000738,6.60e-20,136;CL:0002087,4.84e-19,115;CL:0002031,5.93e-18,120;CL:0000037,1.98e-14,168;CL:0002032,2.16e-14,161;CL:0000837,2.16e-14,161;CL:0000988,2.98e-13,177;CL:0000791,7.92e-12,18;CL:0000789,7.92e-12,18;CL:0002420,7.92e-12,18;CL:0002419,7.92e-12,18;CL:0000790,7.92e-12,18;CL:0000624,4.38e-08,6;CL:0000084,4.63e-08,25;CL:0000827,4.63e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000051;1.80e-18;53!CL:0000790;6.48e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.67e-22!102;UBERON:0003061!3.67e-22!102;UBERON:0002193!3.08e-21!112;UBERON:0002371!1.83e-12!80;UBERON:0001474!6.32e-11!86;UBERON:0002405!1.06e-10!115;UBERON:0000178!1.15e-08!15;UBERON:0000179!1.15e-08!15;UBERON:0000463!1.15e-08!15;UBERON:0004765!5.86e-08!101;UBERON:0001434!5.86e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.23e-11;15!UBERON:0000179;2.23e-11;15!UBERON:0000463;2.23e-11;15!UBERON:0002390;3.65e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.92e-11,15;UBERON:0000179,1.92e-11,15;UBERON:0000463,1.92e-11,15;UBERON:0002193,7.08e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0,5.88750724410292,1.13735385989937,0,0,0.200544447470142,0,1.11957737119962,0.647787332037959,0.515151135268373,0.726991193897824,2.64513160582167,1.69808842831471,0.929716147622738,0.411167888021826,0,0,0.768482119587302,0.709446689665756,0.344745680736619,0,0,0.941211697713023,0.545812300115692,0.224723484445085,0.918251677112708,0.320929027076094,1.27867425159808,0,1.39624560335142,0,0,0,0,0,1.0429658368404,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.59675003159727,0,10.5597746676794,8.7382177801941,6.22656477704488,7.68114400619713,10.8106916499723,6.32227683949932,9.91567309177293,4.77026877267682,5.69212969109448,3.52342313622563,5.73409842187843,0,0,0,1.180258620683,1.57204305099666,1.43921049299656,13.3749196312542,0.32592226663359,1.89379122293893,0,6.12757512868455,0.294605907474837,2.43687284041983,2.97884250141517,5.89220070738106,4.29195846947598,6.41307827954337,6.07970039128866,5.21645554323094,0.593146252648242,1.33770414044857,3.1360657141493,5.89208582027344,3.83220493601921,2.74901956386104,4.30133476433155,1.27426165729639,2.60433381542567,0,0.451725357233318,2.55973222308837,1.24930726552346,2.60454977248419,0.821127996921047,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,0.234004265139238,0.445893486866185,0,0,0,0,0,0,1.47798971368783,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,1.70894156152249,2.38231775457789,3.29089818468955,1.94541993357815,1.62009431171434,1.58625035258854,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59169090190492,0,0,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,1.9846640872478,0,1.94868157409433,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,1.19578356282027,1.96278473107013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,2.34959794949634,1.35361564744512,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0.258355639344024,0.434523000071005,0,0.0636471582781649,0,0.217716747896961,0,6.4657970894004,0.502055437748735,0.332660356546013,0,0,0,0,0,0,0,0,3.01910690386539,1.60284246151616 | |||
|short_description=p@chr14:50443908..50443920,+ | |||
}} |
Revision as of 04:37, 11 September 2013
Short description: | p@chr14:50443908..50443920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:50443908..50443920, + |
Coexpression cluster: | C1103_CD19_CD4_CD8_Whole_blood_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.04e-29 | 52 |
lymphocyte | 2.82e-28 | 53 |
common lymphoid progenitor | 2.82e-28 | 53 |
lymphocyte of B lineage | 1.65e-27 | 24 |
pro-B cell | 1.65e-27 | 24 |
B cell | 1.66e-27 | 14 |
leukocyte | 6.60e-20 | 136 |
nongranular leukocyte | 4.84e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 5.93e-18 | 120 |
hematopoietic stem cell | 1.98e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.16e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-14 | 161 |
hematopoietic cell | 2.98e-13 | 177 |
mature alpha-beta T cell | 7.92e-12 | 18 |
alpha-beta T cell | 7.92e-12 | 18 |
immature T cell | 7.92e-12 | 18 |
mature T cell | 7.92e-12 | 18 |
immature alpha-beta T cell | 7.92e-12 | 18 |
CD4-positive, alpha-beta T cell | 4.38e-08 | 6 |
T cell | 4.63e-08 | 25 |
pro-T cell | 4.63e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 1.92e-11 | 15 |
haemolymphatic fluid | 1.92e-11 | 15 |
organism substance | 1.92e-11 | 15 |
hemolymphoid system | 7.08e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.