FFCP PHASE1:Hg19::chr14:103523745..103523770,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1738 | |||
|TSSclassifier=S | |||
|UniProt=Q86XZ8,Q9Y5S2 | |||
|association_with_transcript=-3bp_to_NM_006035,uc001ymi.1_5end | |||
|description=CAGE_peak_4_at_CDC42BPB_5end | |||
|id=chr14:103523745..103523770,- | |||
|ontology_enrichment_celltype=CL:0000220!9.26e-12!246;CL:0000222!2.58e-11!119;CL:0002321!2.81e-11!248;CL:0002078!2.19e-10!44;CL:0000115!1.75e-09!35;CL:0000055!5.78e-09!180;CL:0000057!2.15e-08!75;CL:0002139!2.29e-08!24;CL:0000071!1.25e-07!18;CL:0002546!1.25e-07!18;CL:0000066!2.30e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.57e-08;24!CL:0000115;3.58e-08;36!CL:0002078;1.18e-07;45!CL:0000071;1.29e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.61e-10,121;CL:0002078,1.62e-10,45;CL:0000115,1.24e-09,36;CL:0000057,4.75e-09,76;CL:0002321,1.65e-08,250;CL:0002139,2.87e-08,24;CL:0000071,8.70e-08,18;CL:0002546,8.70e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.29e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;1.29e-07;18!UBERON:0001986;1.29e-07;18!UBERON:0004852;1.29e-07;18!UBERON:0000487;7.29e-07;22 | |||
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| |||
|short_description=p4@CDC42BPB | |||
}} |
Revision as of 03:22, 11 September 2013
Short description: | p4@CDC42BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CDC42BPB_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_NM_006035, uc001ymi.1_5end |
EntrezGene: | CDC42BPB |
HGNC: | 1738 |
UniProt: | Q86XZ8Q9Y5S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.61e-10 | 121 |
meso-epithelial cell | 1.62e-10 | 45 |
endothelial cell | 1.24e-09 | 36 |
fibroblast | 4.75e-09 | 76 |
embryonic cell | 1.65e-08 | 250 |
endothelial cell of vascular tree | 2.87e-08 | 24 |
blood vessel endothelial cell | 8.70e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.70e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 9.89e-19 | 240 |
cell layer | 1.32e-18 | 309 |
epithelium | 3.68e-18 | 306 |
epithelial tube | 5.77e-16 | 117 |
tube | 5.23e-15 | 192 |
vasculature | 4.53e-12 | 78 |
vascular system | 4.53e-12 | 78 |
splanchnic layer of lateral plate mesoderm | 1.02e-11 | 83 |
vessel | 4.37e-11 | 68 |
unilaminar epithelium | 6.22e-10 | 148 |
epithelial tube open at both ends | 6.37e-10 | 59 |
blood vessel | 6.37e-10 | 59 |
blood vasculature | 6.37e-10 | 59 |
vascular cord | 6.37e-10 | 59 |
trunk mesenchyme | 1.18e-09 | 122 |
circulatory system | 6.22e-09 | 112 |
trunk | 1.22e-08 | 199 |
mesenchyme | 1.91e-08 | 160 |
entire embryonic mesenchyme | 1.91e-08 | 160 |
cardiovascular system | 2.32e-08 | 109 |
blood vessel endothelium | 8.70e-08 | 18 |
endothelium | 8.70e-08 | 18 |
cardiovascular system endothelium | 8.70e-08 | 18 |
epithelial vesicle | 1.51e-07 | 78 |
simple squamous epithelium | 5.22e-07 | 22 |
developing anatomical structure | 8.78e-07 | 581 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.