FFCP PHASE1:Hg19::chr14:103589534..103589553,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7127|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11895|TSSclassifier=W|UniProt=|association_with_transcript=-225bp_to_ENST00000559195,uc001yml.1_5end|description=CAGE_peak_7_at_TNFAIP2_5end|id=chr14:103589534..103589553,+|ontology_enrichment_celltype=CL:0002057!1.58e-34!42;CL:0000860!9.77e-34!45;CL:0000766!3.26e-30!76;CL:0002194!1.63e-27!63;CL:0000576!1.63e-27!63;CL:0000040!1.63e-27!63;CL:0000559!1.63e-27!63;CL:0002009!4.42e-26!65;CL:0000763!3.22e-24!112;CL:0000049!3.22e-24!112;CL:0000839!8.61e-24!70;CL:0000557!3.44e-23!71;CL:0000738!2.67e-12!140;CL:0000037!1.39e-11!172;CL:0000566!1.39e-11!172;CL:0000988!2.64e-11!182;CL:0002032!9.06e-11!165;CL:0000837!9.06e-11!165;CL:0002087!5.70e-10!119;CL:0002393!6.85e-09!9;CL:0002397!6.85e-09!9;CL:0002031!9.19e-08!124|ontology_enrichment_celltype_v019=CL:0000860;9.27e-37;33!CL:0002057;9.27e-37;33!CL:0000473;5.04e-28;39!CL:0000234;5.04e-28;39!CL:0000576;5.33e-22;48!CL:0000766;3.13e-17;69!CL:0000094;1.99e-14;8!CL:0000771;7.32e-11;2!CL:0000081;2.06e-10;11!CL:0000123;4.02e-10;2!CL:0000159;4.02e-10;2!CL:0000242;4.02e-10;2!CL:0000763;9.41e-10;100!CL:0002393;2.71e-07;6!CL:0002397;2.71e-07;6!CL:0000775;5.14e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,3.85e-42,42;CL:0002057,3.85e-42,42;CL:0000473,4.19e-40,48;CL:0000234,4.19e-40,48;CL:0000766,7.35e-39,72;CL:0002194,4.95e-31,59;CL:0000576,4.95e-31,59;CL:0000040,4.95e-31,59;CL:0000559,4.95e-31,59;CL:0002009,7.33e-30,61;CL:0000839,3.05e-27,66;CL:0000557,9.17e-27,67;CL:0000763,4.41e-26,108;CL:0000049,4.41e-26,108;CL:0000738,2.64e-19,136;CL:0000037,8.37e-16,168;CL:0002032,1.96e-15,161;CL:0000837,1.96e-15,161;CL:0002087,5.40e-15,115;CL:0000988,1.13e-14,177;CL:0000094,2.27e-14,8;CL:0002031,8.61e-13,120;CL:0000771,6.85e-11,2;CL:0000081,2.26e-10,11;CL:0000242,3.07e-10,2;CL:0000159,6.96e-10,2;CL:0000775,4.57e-07,3|ontology_enrichment_development_v019=CL:0002057;3.65e-31;42!CL:0000049;3.27e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.86e-19!80;UBERON:0002390!9.26e-19!102;UBERON:0003061!9.26e-19!102;UBERON:0001474!2.17e-18!86;UBERON:0002193!2.63e-18!112;UBERON:0002405!3.06e-15!115;UBERON:0004765!3.24e-14!101;UBERON:0001434!3.24e-14!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.02e-23,76;UBERON:0001474,5.50e-21,82;UBERON:0004765,1.10e-18,90;UBERON:0002390,1.74e-18,98;UBERON:0003061,1.74e-18,98;UBERON:0002405,6.32e-18,93;UBERON:0001434,2.50e-16,100;UBERON:0002193,2.68e-16,108;UBERON:0003081,1.11e-09,203;UBERON:0002204,7.57e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0,0,0,1.15148819429164,0.464448369948228,0,0,0,0,0,0.293600439334847,1.66198622559563,2.4065333696417,1.73608696572681,0.671746422719773,0,0.515151135268373,0.581592955118259,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,1.85823822537062,0.863077176966451,1.7931249457037,1.18241114944293,0.689491361473237,3.22742341791913,2.70852973188684,1.31769637679823,0.545812300115692,0.674170453335254,1.83650335422542,0.641858054152187,0,0,1.99463657621632,0.852449501065388,1.45104619314292,1.70215567407342,1.24564449799115,1.25624332628372,3.12889751052121,1.95469960234605,1.21079900526674,2.57794345191295,1.89877432464531,0.845021145247767,0.425208599930087,0.419317291016752,0.673971786878971,0.600707571366025,1.28580469357664,0.570025487482497,0.39783335439818,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,3.79839318943367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0,0.225222960966644,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0.558350568994769,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.487894824518382,0,0.116193942869518,0.621966330092223,0.756962552626885,0,0,0,0,0,0,0,0.505754070234305,0,0.220587945464788,0,0,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0.144366447761074,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.215714200818617,0.320182673410333,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0.393373244878272,0,0,0.784349769176855,0,0,1.13733384070897,0,0.215915916102139,1.5422725269028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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7127 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11895 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-225bp_to_ENST00000559195,uc001yml.1_5end | |||
|description=CAGE_peak_7_at_TNFAIP2_5end | |||
|id=chr14:103589534..103589553,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.58e-34!42;CL:0000860!9.77e-34!45;CL:0000766!3.26e-30!76;CL:0002194!1.63e-27!63;CL:0000576!1.63e-27!63;CL:0000040!1.63e-27!63;CL:0000559!1.63e-27!63;CL:0002009!4.42e-26!65;CL:0000763!3.22e-24!112;CL:0000049!3.22e-24!112;CL:0000839!8.61e-24!70;CL:0000557!3.44e-23!71;CL:0000738!2.67e-12!140;CL:0000037!1.39e-11!172;CL:0000566!1.39e-11!172;CL:0000988!2.64e-11!182;CL:0002032!9.06e-11!165;CL:0000837!9.06e-11!165;CL:0002087!5.70e-10!119;CL:0002393!6.85e-09!9;CL:0002397!6.85e-09!9;CL:0002031!9.19e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.27e-37;33!CL:0002057;9.27e-37;33!CL:0000473;5.04e-28;39!CL:0000234;5.04e-28;39!CL:0000576;5.33e-22;48!CL:0000766;3.13e-17;69!CL:0000094;1.99e-14;8!CL:0000771;7.32e-11;2!CL:0000081;2.06e-10;11!CL:0000123;4.02e-10;2!CL:0000159;4.02e-10;2!CL:0000242;4.02e-10;2!CL:0000763;9.41e-10;100!CL:0002393;2.71e-07;6!CL:0002397;2.71e-07;6!CL:0000775;5.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.85e-42,42;CL:0002057,3.85e-42,42;CL:0000473,4.19e-40,48;CL:0000234,4.19e-40,48;CL:0000766,7.35e-39,72;CL:0002194,4.95e-31,59;CL:0000576,4.95e-31,59;CL:0000040,4.95e-31,59;CL:0000559,4.95e-31,59;CL:0002009,7.33e-30,61;CL:0000839,3.05e-27,66;CL:0000557,9.17e-27,67;CL:0000763,4.41e-26,108;CL:0000049,4.41e-26,108;CL:0000738,2.64e-19,136;CL:0000037,8.37e-16,168;CL:0002032,1.96e-15,161;CL:0000837,1.96e-15,161;CL:0002087,5.40e-15,115;CL:0000988,1.13e-14,177;CL:0000094,2.27e-14,8;CL:0002031,8.61e-13,120;CL:0000771,6.85e-11,2;CL:0000081,2.26e-10,11;CL:0000242,3.07e-10,2;CL:0000159,6.96e-10,2;CL:0000775,4.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.65e-31;42!CL:0000049;3.27e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.86e-19!80;UBERON:0002390!9.26e-19!102;UBERON:0003061!9.26e-19!102;UBERON:0001474!2.17e-18!86;UBERON:0002193!2.63e-18!112;UBERON:0002405!3.06e-15!115;UBERON:0004765!3.24e-14!101;UBERON:0001434!3.24e-14!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.02e-23,76;UBERON:0001474,5.50e-21,82;UBERON:0004765,1.10e-18,90;UBERON:0002390,1.74e-18,98;UBERON:0003061,1.74e-18,98;UBERON:0002405,6.32e-18,93;UBERON:0001434,2.50e-16,100;UBERON:0002193,2.68e-16,108;UBERON:0003081,1.11e-09,203;UBERON:0002204,7.57e-08,167 | |||
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| |||
|short_description=p7@TNFAIP2 | |||
}} |
Revision as of 03:23, 11 September 2013
Short description: | p7@TNFAIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TNFAIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -225bp_to_ENST00000559195, uc001yml.1_5end |
EntrezGene: | TNFAIP2 |
HGNC: | 11895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.85e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.85e-42 | 42 |
defensive cell | 4.19e-40 | 48 |
phagocyte | 4.19e-40 | 48 |
myeloid leukocyte | 7.35e-39 | 72 |
monopoietic cell | 4.95e-31 | 59 |
monocyte | 4.95e-31 | 59 |
monoblast | 4.95e-31 | 59 |
promonocyte | 4.95e-31 | 59 |
macrophage dendritic cell progenitor | 7.33e-30 | 61 |
myeloid lineage restricted progenitor cell | 3.05e-27 | 66 |
granulocyte monocyte progenitor cell | 9.17e-27 | 67 |
myeloid cell | 4.41e-26 | 108 |
common myeloid progenitor | 4.41e-26 | 108 |
leukocyte | 2.64e-19 | 136 |
hematopoietic stem cell | 8.37e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.96e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-15 | 161 |
nongranular leukocyte | 5.40e-15 | 115 |
hematopoietic cell | 1.13e-14 | 177 |
granulocyte | 2.27e-14 | 8 |
hematopoietic lineage restricted progenitor cell | 8.61e-13 | 120 |
eosinophil | 6.85e-11 | 2 |
blood cell | 2.26e-10 | 11 |
Merkel cell | 3.07e-10 | 2 |
seromucus secreting cell | 6.96e-10 | 2 |
neutrophil | 4.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.02e-23 | 76 |
bone element | 5.50e-21 | 82 |
skeletal element | 1.10e-18 | 90 |
hematopoietic system | 1.74e-18 | 98 |
blood island | 1.74e-18 | 98 |
immune system | 6.32e-18 | 93 |
skeletal system | 2.50e-16 | 100 |
hemolymphoid system | 2.68e-16 | 108 |
lateral plate mesoderm | 1.11e-09 | 203 |
musculoskeletal system | 7.57e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.