FFCP PHASE1:Hg19::chr15:50358999..50359010,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C82|description=CAGE_peak_at_chr15:50358999..50359010,+|id=chr15:50358999..50359010,+|ontology_enrichment_celltype=CL:0002057!3.62e-58!42;CL:0000860!5.33e-54!45;CL:0000738!3.61e-40!140;CL:0000766!1.22e-39!76;CL:0002009!4.96e-39!65;CL:0000557!7.78e-39!71;CL:0002194!1.15e-36!63;CL:0000576!1.15e-36!63;CL:0000040!1.15e-36!63;CL:0000559!1.15e-36!63;CL:0002087!3.34e-36!119;CL:0000839!6.17e-36!70;CL:0002031!7.26e-32!124;CL:0000037!1.10e-31!172;CL:0000566!1.10e-31!172;CL:0000988!1.22e-29!182;CL:0000763!7.93e-28!112;CL:0000049!7.93e-28!112;CL:0002032!1.07e-26!165;CL:0000837!1.07e-26!165;CL:0000623!7.15e-19!3;CL:0000825!7.15e-19!3;CL:0000842!4.82e-18!3;CL:0000224!1.12e-13!4;CL:0000134!3.22e-12!358;CL:0002320!7.20e-12!365;CL:0000219!1.23e-10!390;CL:0000080!2.75e-09!6;CL:0000048!3.70e-09!430;CL:0000767!4.60e-09!3;CL:0000723!6.01e-09!436;CL:0000034!1.12e-08!444|ontology_enrichment_celltype_v019=CL:0000860;1.97e-19;33!CL:0002057;1.97e-19;33!CL:0000473;1.24e-15;39!CL:0000234;1.24e-15;39!CL:0000576;2.48e-15;48!CL:0000766;5.63e-12;69!CL:0000623;5.18e-08;3!CL:0000226;7.02e-08;3!CL:0000767;7.02e-08;3!CL:0000842;7.02e-08;3!CL:0002087;9.79e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,6.94e-23,42;CL:0002057,6.94e-23,42;CL:0000473,5.19e-20,48;CL:0000234,5.19e-20,48;CL:0000766,4.69e-17,72;CL:0002194,5.58e-16,59;CL:0000576,5.58e-16,59;CL:0000040,5.58e-16,59;CL:0000559,5.58e-16,59;CL:0002009,1.85e-15,61;CL:0000839,2.72e-14,66;CL:0000557,4.45e-14,67;CL:0000738,4.83e-14,136;CL:0002087,1.95e-13,115;CL:0000763,2.60e-11,108;CL:0000049,2.60e-11,108;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0002031,3.71e-10,120;CL:0002032,1.68e-09,161;CL:0000837,1.68e-09,161;CL:0000623,5.54e-08,3;CL:0000825,5.54e-08,3;CL:0000767,5.93e-08,3;CL:0000226,7.26e-08,3;CL:0000842,7.26e-08,3|ontology_enrichment_development_v019=CL:0002057;2.27e-18;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.40e-34!80;UBERON:0002390!1.15e-33!102;UBERON:0003061!1.15e-33!102;UBERON:0001474!2.54e-31!86;UBERON:0002193!3.15e-30!112;UBERON:0004765!5.14e-26!101;UBERON:0001434!5.14e-26!101;UBERON:0002405!2.67e-22!115;UBERON:0003081!1.57e-14!216;UBERON:0002204!6.42e-14!167;UBERON:0002384!2.16e-11!375;UBERON:0002146!4.89e-07!1;UBERON:0005623!4.89e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.80e-12,98;UBERON:0003061,1.80e-12,98;UBERON:0002371,2.08e-12,76;UBERON:0001474,1.71e-11,82;UBERON:0002193,2.71e-11,108;UBERON:0004765,1.85e-10,90;UBERON:0002405,4.06e-10,93;UBERON:0001434,2.14e-09,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,1.54816123316076,0,0,0,0,0,0,0,0.601633342410425,3.90619567288533,0,0,0,0.290796477559129,0.377875943688809,0,0.929716147622738,0.822335776043652,0.309706370895104,1.43846196161075,0,0.709446689665756,2.41321976515633,0.645484683583826,2.70852973188684,0.188242339542605,0,0,0.918251677112708,0,1.27867425159808,0,0,0,0.290209238628584,0,0,1.50749199154046,0,1.08594422352558,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,2.05348858047597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr15:50358999..50359010,+ | |||
|id=chr15:50358999..50359010,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.62e-58!42;CL:0000860!5.33e-54!45;CL:0000738!3.61e-40!140;CL:0000766!1.22e-39!76;CL:0002009!4.96e-39!65;CL:0000557!7.78e-39!71;CL:0002194!1.15e-36!63;CL:0000576!1.15e-36!63;CL:0000040!1.15e-36!63;CL:0000559!1.15e-36!63;CL:0002087!3.34e-36!119;CL:0000839!6.17e-36!70;CL:0002031!7.26e-32!124;CL:0000037!1.10e-31!172;CL:0000566!1.10e-31!172;CL:0000988!1.22e-29!182;CL:0000763!7.93e-28!112;CL:0000049!7.93e-28!112;CL:0002032!1.07e-26!165;CL:0000837!1.07e-26!165;CL:0000623!7.15e-19!3;CL:0000825!7.15e-19!3;CL:0000842!4.82e-18!3;CL:0000224!1.12e-13!4;CL:0000134!3.22e-12!358;CL:0002320!7.20e-12!365;CL:0000219!1.23e-10!390;CL:0000080!2.75e-09!6;CL:0000048!3.70e-09!430;CL:0000767!4.60e-09!3;CL:0000723!6.01e-09!436;CL:0000034!1.12e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.97e-19;33!CL:0002057;1.97e-19;33!CL:0000473;1.24e-15;39!CL:0000234;1.24e-15;39!CL:0000576;2.48e-15;48!CL:0000766;5.63e-12;69!CL:0000623;5.18e-08;3!CL:0000226;7.02e-08;3!CL:0000767;7.02e-08;3!CL:0000842;7.02e-08;3!CL:0002087;9.79e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.94e-23,42;CL:0002057,6.94e-23,42;CL:0000473,5.19e-20,48;CL:0000234,5.19e-20,48;CL:0000766,4.69e-17,72;CL:0002194,5.58e-16,59;CL:0000576,5.58e-16,59;CL:0000040,5.58e-16,59;CL:0000559,5.58e-16,59;CL:0002009,1.85e-15,61;CL:0000839,2.72e-14,66;CL:0000557,4.45e-14,67;CL:0000738,4.83e-14,136;CL:0002087,1.95e-13,115;CL:0000763,2.60e-11,108;CL:0000049,2.60e-11,108;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0002031,3.71e-10,120;CL:0002032,1.68e-09,161;CL:0000837,1.68e-09,161;CL:0000623,5.54e-08,3;CL:0000825,5.54e-08,3;CL:0000767,5.93e-08,3;CL:0000226,7.26e-08,3;CL:0000842,7.26e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.40e-34!80;UBERON:0002390!1.15e-33!102;UBERON:0003061!1.15e-33!102;UBERON:0001474!2.54e-31!86;UBERON:0002193!3.15e-30!112;UBERON:0004765!5.14e-26!101;UBERON:0001434!5.14e-26!101;UBERON:0002405!2.67e-22!115;UBERON:0003081!1.57e-14!216;UBERON:0002204!6.42e-14!167;UBERON:0002384!2.16e-11!375;UBERON:0002146!4.89e-07!1;UBERON:0005623!4.89e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.80e-12,98;UBERON:0003061,1.80e-12,98;UBERON:0002371,2.08e-12,76;UBERON:0001474,1.71e-11,82;UBERON:0002193,2.71e-11,108;UBERON:0004765,1.85e-10,90;UBERON:0002405,4.06e-10,93;UBERON:0001434,2.14e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,1.54816123316076,0,0,0,0,0,0,0,0.601633342410425,3.90619567288533,0,0,0,0.290796477559129,0.377875943688809,0,0.929716147622738,0.822335776043652,0.309706370895104,1.43846196161075,0,0.709446689665756,2.41321976515633,0.645484683583826,2.70852973188684,0.188242339542605,0,0,0.918251677112708,0,1.27867425159808,0,0,0,0.290209238628584,0,0,1.50749199154046,0,1.08594422352558,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,2.05348858047597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:50358999..50359010,+ | |||
}} |
Revision as of 07:18, 11 September 2013
Short description: | p@chr15:50358999..50359010, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:50358999..50359010, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.94e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.94e-23 | 42 |
defensive cell | 5.19e-20 | 48 |
phagocyte | 5.19e-20 | 48 |
myeloid leukocyte | 4.69e-17 | 72 |
monopoietic cell | 5.58e-16 | 59 |
monocyte | 5.58e-16 | 59 |
monoblast | 5.58e-16 | 59 |
promonocyte | 5.58e-16 | 59 |
macrophage dendritic cell progenitor | 1.85e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.72e-14 | 66 |
granulocyte monocyte progenitor cell | 4.45e-14 | 67 |
leukocyte | 4.83e-14 | 136 |
nongranular leukocyte | 1.95e-13 | 115 |
myeloid cell | 2.60e-11 | 108 |
common myeloid progenitor | 2.60e-11 | 108 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 3.71e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.68e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-09 | 161 |
natural killer cell | 5.54e-08 | 3 |
pro-NK cell | 5.54e-08 | 3 |
basophil | 5.93e-08 | 3 |
single nucleate cell | 7.26e-08 | 3 |
mononuclear cell | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.80e-12 | 98 |
blood island | 1.80e-12 | 98 |
bone marrow | 2.08e-12 | 76 |
bone element | 1.71e-11 | 82 |
hemolymphoid system | 2.71e-11 | 108 |
skeletal element | 1.85e-10 | 90 |
immune system | 4.06e-10 | 93 |
skeletal system | 2.14e-09 | 100 |
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