FFCP PHASE1:Hg19::chr15:70994612..70994652,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55075|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15947|TSSclassifier=W|UniProt=G3XAG2,Q05DB3,Q96NH6,Q9BZF9|association_with_transcript=0bp_to_ENST00000379983,ENST00000558758,ENST00000560441,ENST00000560904,NM_001008224,uc002asq.2,uc010bin.1_5end|description=CAGE_peak_3_at_UACA_5end|id=chr15:70994612..70994652,-|ontology_enrichment_celltype=CL:0000222!6.84e-15!119;CL:0002139!1.35e-14!24;CL:0000115!6.80e-12!35;CL:0000071!8.34e-11!18;CL:0002546!8.34e-11!18;CL:0000213!9.59e-11!57;CL:0000215!9.59e-11!57;CL:0002078!2.28e-08!44;CL:0000055!2.79e-08!180;CL:0000325!1.35e-07!39;CL:0000220!3.60e-07!246;CL:0002321!7.94e-07!248|ontology_enrichment_celltype_v019=CL:0002139;7.66e-17;24!CL:0000115;3.05e-13;36!CL:0000071;3.61e-12;18!CL:0000213;1.27e-08;58!CL:0000215;1.27e-08;58!CL:1000413;2.10e-07;9!CL:0002078;3.81e-07;45|ontology_enrichment_celltype_v019_2=CL:0002139,8.85e-17,24;CL:0000115,1.08e-15,36;CL:0000213,4.17e-14,58;CL:0000215,4.17e-14,58;CL:0000222,1.62e-13,121;CL:0000071,4.29e-12,18;CL:0002546,4.29e-12,18;CL:0002078,3.89e-11,45;CL:1000413,2.46e-07,9|ontology_enrichment_development_v019=CL:0002546;3.61e-12;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!2.04e-20!79;UBERON:0007798!2.04e-20!79;UBERON:0004872!1.38e-19!84;UBERON:0001009!2.22e-19!113;UBERON:0004535!6.44e-19!110;UBERON:0000055!1.77e-17!69;UBERON:0001981!1.96e-15!60;UBERON:0007500!1.96e-15!60;UBERON:0004537!1.96e-15!60;UBERON:0006965!1.96e-15!60;UBERON:0000119!3.64e-15!312;UBERON:0000490!4.33e-15!138;UBERON:0000483!1.19e-14!309;UBERON:0003914!1.33e-14!118;UBERON:0004111!4.32e-13!241;UBERON:0000025!9.80e-12!194;UBERON:0000468!1.38e-11!659;UBERON:0000477!3.94e-11!286;UBERON:0001986!8.34e-11!18;UBERON:0004638!8.34e-11!18;UBERON:0004852!8.34e-11!18;UBERON:0000475!2.61e-10!365;UBERON:0000487!7.93e-10!22;UBERON:0000467!2.95e-09!625;UBERON:0000480!4.33e-09!626;UBERON:0000481!8.34e-09!347;UBERON:0002385!1.23e-08!63;UBERON:0001015!1.23e-08!63;UBERON:0000383!1.23e-08!63;UBERON:0001637!1.98e-08!42;UBERON:0003509!1.98e-08!42;UBERON:0004572!1.98e-08!42;UBERON:0001134!3.81e-08!61;UBERON:0002036!3.81e-08!61;UBERON:0003082!3.81e-08!61;UBERON:0006914!4.26e-08!25;UBERON:0007625!8.66e-08!11;UBERON:0002100!9.50e-08!216;UBERON:0007100!9.08e-07!27;UBERON:0000947!9.29e-07!21;UBERON:0010191!9.29e-07!21|ontology_enrichment_uberon_v019=UBERON:0004638;3.61e-12;18!UBERON:0001986;3.61e-12;18!UBERON:0004852;3.61e-12;18!UBERON:0000487;7.88e-10;22!UBERON:0000490;2.46e-09;33!UBERON:0007625;2.91e-09;11!UBERON:0002049;5.04e-09;75!UBERON:0007798;5.04e-09;75!UBERON:0000055;1.32e-08;65!UBERON:0007500;3.10e-08;56!UBERON:0001981;3.10e-08;56!UBERON:0004537;3.10e-08;56!UBERON:0006914;7.77e-08;25!UBERON:0003915;2.10e-07;9!UBERON:0004700;2.10e-07;9!UBERON:0001917;2.10e-07;9!UBERON:0001637;4.70e-07;42!UBERON:0003509;4.70e-07;42!UBERON:0004572;4.70e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.50e-20,78;UBERON:0007798,5.50e-20,78;UBERON:0004872,6.87e-19,83;UBERON:0001009,3.28e-18,112;UBERON:0004535,3.90e-18,109;UBERON:0000055,2.62e-16,68;UBERON:0007500,5.09e-14,59;UBERON:0001981,5.09e-14,59;UBERON:0004537,5.09e-14,59;UBERON:0006965,5.09e-14,59;UBERON:0003914,6.64e-14,117;UBERON:0004638,4.29e-12,18;UBERON:0001986,4.29e-12,18;UBERON:0004852,4.29e-12,18;UBERON:0000490,9.17e-11,148;UBERON:0000487,9.46e-10,22;UBERON:0007625,2.57e-09,11;UBERON:0000119,1.13e-08,309;UBERON:0002100,1.35e-08,199;UBERON:0000483,1.84e-08,306;UBERON:0006914,9.01e-08,25;UBERON:0005256,1.84e-07,122;UBERON:0001637,1.95e-07,42;UBERON:0003509,1.95e-07,42;UBERON:0004572,1.95e-07,42;UBERON:0004111,2.06e-07,240;UBERON:0003915,2.46e-07,9;UBERON:0004700,2.46e-07,9;UBERON:0001917,2.46e-07,9|phase1_expression=14.5342703416445,12.417830385677,17.0554828956125,43.0315182918461,25.0298212879281,14.8297549097063,0,0,0.261185628199839,0.737201809504527,0,0.436882744260345,0.527533956456907,0,0,3.36162573225888,1.80808358407193,2.19093027116212,1.46379839637152,1.96993692922861,0.816002764977012,0.313454721478088,2.0036519099174,2.32686522623903,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,2.68511379871414,0,0,0,0,0,38.0029964999553,11.9733874629785,13.5265569967414,5.82856885964821,0,0,0,0,0,0,0,0,15.3047053672363,4.30117297553062,12.844198559481,5.08777147731609,5.45349267072878,20.0836170616249,15.2566325571872,64.3457730331629,90.0088644597377,215.894795233212,43.1027369306787,21.2876189601184,43.9311703586705,27.2070679455943,12.1521292182264,106.088077201487,22.6774666352431,44.4815347909123,6.13266549863533,0.949265659568129,2.38162267109529,0,0,0,0,22.7934920996244,2.1185468930115,8.60509862246441,5.32002573297536,2.24271040056923,6.4049397437823,3.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15947 | |||
|TSSclassifier=W | |||
|UniProt=G3XAG2,Q05DB3,Q96NH6,Q9BZF9 | |||
|association_with_transcript=0bp_to_ENST00000379983,ENST00000558758,ENST00000560441,ENST00000560904,NM_001008224,uc002asq.2,uc010bin.1_5end | |||
|description=CAGE_peak_3_at_UACA_5end | |||
|id=chr15:70994612..70994652,- | |||
|ontology_enrichment_celltype=CL:0000222!6.84e-15!119;CL:0002139!1.35e-14!24;CL:0000115!6.80e-12!35;CL:0000071!8.34e-11!18;CL:0002546!8.34e-11!18;CL:0000213!9.59e-11!57;CL:0000215!9.59e-11!57;CL:0002078!2.28e-08!44;CL:0000055!2.79e-08!180;CL:0000325!1.35e-07!39;CL:0000220!3.60e-07!246;CL:0002321!7.94e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.66e-17;24!CL:0000115;3.05e-13;36!CL:0000071;3.61e-12;18!CL:0000213;1.27e-08;58!CL:0000215;1.27e-08;58!CL:1000413;2.10e-07;9!CL:0002078;3.81e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.85e-17,24;CL:0000115,1.08e-15,36;CL:0000213,4.17e-14,58;CL:0000215,4.17e-14,58;CL:0000222,1.62e-13,121;CL:0000071,4.29e-12,18;CL:0002546,4.29e-12,18;CL:0002078,3.89e-11,45;CL:1000413,2.46e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;3.61e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.04e-20!79;UBERON:0007798!2.04e-20!79;UBERON:0004872!1.38e-19!84;UBERON:0001009!2.22e-19!113;UBERON:0004535!6.44e-19!110;UBERON:0000055!1.77e-17!69;UBERON:0001981!1.96e-15!60;UBERON:0007500!1.96e-15!60;UBERON:0004537!1.96e-15!60;UBERON:0006965!1.96e-15!60;UBERON:0000119!3.64e-15!312;UBERON:0000490!4.33e-15!138;UBERON:0000483!1.19e-14!309;UBERON:0003914!1.33e-14!118;UBERON:0004111!4.32e-13!241;UBERON:0000025!9.80e-12!194;UBERON:0000468!1.38e-11!659;UBERON:0000477!3.94e-11!286;UBERON:0001986!8.34e-11!18;UBERON:0004638!8.34e-11!18;UBERON:0004852!8.34e-11!18;UBERON:0000475!2.61e-10!365;UBERON:0000487!7.93e-10!22;UBERON:0000467!2.95e-09!625;UBERON:0000480!4.33e-09!626;UBERON:0000481!8.34e-09!347;UBERON:0002385!1.23e-08!63;UBERON:0001015!1.23e-08!63;UBERON:0000383!1.23e-08!63;UBERON:0001637!1.98e-08!42;UBERON:0003509!1.98e-08!42;UBERON:0004572!1.98e-08!42;UBERON:0001134!3.81e-08!61;UBERON:0002036!3.81e-08!61;UBERON:0003082!3.81e-08!61;UBERON:0006914!4.26e-08!25;UBERON:0007625!8.66e-08!11;UBERON:0002100!9.50e-08!216;UBERON:0007100!9.08e-07!27;UBERON:0000947!9.29e-07!21;UBERON:0010191!9.29e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.61e-12;18!UBERON:0001986;3.61e-12;18!UBERON:0004852;3.61e-12;18!UBERON:0000487;7.88e-10;22!UBERON:0000490;2.46e-09;33!UBERON:0007625;2.91e-09;11!UBERON:0002049;5.04e-09;75!UBERON:0007798;5.04e-09;75!UBERON:0000055;1.32e-08;65!UBERON:0007500;3.10e-08;56!UBERON:0001981;3.10e-08;56!UBERON:0004537;3.10e-08;56!UBERON:0006914;7.77e-08;25!UBERON:0003915;2.10e-07;9!UBERON:0004700;2.10e-07;9!UBERON:0001917;2.10e-07;9!UBERON:0001637;4.70e-07;42!UBERON:0003509;4.70e-07;42!UBERON:0004572;4.70e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.50e-20,78;UBERON:0007798,5.50e-20,78;UBERON:0004872,6.87e-19,83;UBERON:0001009,3.28e-18,112;UBERON:0004535,3.90e-18,109;UBERON:0000055,2.62e-16,68;UBERON:0007500,5.09e-14,59;UBERON:0001981,5.09e-14,59;UBERON:0004537,5.09e-14,59;UBERON:0006965,5.09e-14,59;UBERON:0003914,6.64e-14,117;UBERON:0004638,4.29e-12,18;UBERON:0001986,4.29e-12,18;UBERON:0004852,4.29e-12,18;UBERON:0000490,9.17e-11,148;UBERON:0000487,9.46e-10,22;UBERON:0007625,2.57e-09,11;UBERON:0000119,1.13e-08,309;UBERON:0002100,1.35e-08,199;UBERON:0000483,1.84e-08,306;UBERON:0006914,9.01e-08,25;UBERON:0005256,1.84e-07,122;UBERON:0001637,1.95e-07,42;UBERON:0003509,1.95e-07,42;UBERON:0004572,1.95e-07,42;UBERON:0004111,2.06e-07,240;UBERON:0003915,2.46e-07,9;UBERON:0004700,2.46e-07,9;UBERON:0001917,2.46e-07,9 | |||
|phase1_expression=14.5342703416445,12.417830385677,17.0554828956125,43.0315182918461,25.0298212879281,14.8297549097063,0,0,0.261185628199839,0.737201809504527,0,0.436882744260345,0.527533956456907,0,0,3.36162573225888,1.80808358407193,2.19093027116212,1.46379839637152,1.96993692922861,0.816002764977012,0.313454721478088,2.0036519099174,2.32686522623903,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,2.68511379871414,0,0,0,0,0,38.0029964999553,11.9733874629785,13.5265569967414,5.82856885964821,0,0,0,0,0,0,0,0,15.3047053672363,4.30117297553062,12.844198559481,5.08777147731609,5.45349267072878,20.0836170616249,15.2566325571872,64.3457730331629,90.0088644597377,215.894795233212,43.1027369306787,21.2876189601184,43.9311703586705,27.2070679455943,12.1521292182264,106.088077201487,22.6774666352431,44.4815347909123,6.13266549863533,0.949265659568129,2.38162267109529,0,0,0,0,22.7934920996244,2.1185468930115,8.60509862246441,5.32002573297536,2.24271040056923,6.4049397437823,3.7000132262574,2.8008993185979,8.35206166832066,11.2788713148287,2.11900398702904,4.60940739583999,0,0,3.4228309292667,0,0,0,0.140450806702248,0,0,0.309977343527296,0,0,0,0.718618141816238,0,0,0.277064115484183,0.438977620880838,0,0,11.9103792318022,0.538168907066586,0.213557388818567,0.423863802319124,2.10063767259082,1.13357782162283,0.257640540045629,0.744467425326359,4.72573730275545,17.8309719444993,1.26216887122057,0.276149695926898,0.323292113637624,1.06502877754984,1.10827308050404,0.339121184620975,0,0,0.286804595389004,0,0,0.580969714347592,0.725627385107593,0,0,0,1.92972281457866,0,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,50.1945709144761,2.80483547606892,2.4694440679884,4.41026134156626,0,0,5.31710916013264,0,4.67356066463832,7.89211927373218,0,0,0,0.0925884451585296,0,0,10.1031939417691,27.2436451691431,10.0971477042807,18.3345388656564,3.70388410061289,22.4499899636826,1.58040879591855,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0.12624243342638,8.8262073066115,3.05590740446622,2.34434894420094,1.71072446022705,2.77634230298973,2.10240140490742,11.1472308725925,1.12131084345361,0.87192013766656,4.2536205776151,7.36848779819333,0,0.845302752556,1.06375246633948,0,0.257207374262142,0,0,1.57275793023962,0,0,2.93162565864362,1.42156779497018,0.791951872933429,4.82303003295338,7.84380112740265,12.7965428713033,0,0,0,0.239624855491583,0,1.42636905040718,4.05387658669222,1.02738161275192,2.68591444859843,0,0,0,0,14.9915828291253,3.90419561572865,0.773288812777695,7.70574820538004,1.91381625495949,0,0,0,0,0,0,0,0,0.630809660135739,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,0,0.391602314925481,0.343143423810856,0,0,0,0,1.66435439510497,0,24.3145651662401,27.9300791384274,17.4009258548506,13.3264715225929,97.7360845717404,17.0505156412224,4.45254199334973,0.616838775210622,0.887808626565635,0.492762936082855,0.519254429183621,1.04589340613963,11.9650855095706,0,0,0.459257792658427,1.27463817604702,2.62248829918848,0,0.0770153371044148,0,0,0,39.8066844248138,18.0299327593107,68.8771772365825,52.4372659146984,0.270946437543853,0,0,0,0,0,0,7.43705362837529,48.8741822092562,68.9802196688322,7.21287081534056,3.29650073346036,5.44562699475881,0,0,3.21367859688319,0.96670718292122,0.308097234229289,1.22802939780904,2.06754858726796,0.322260734604821,0.725083469571143,1.96021243057032,78.6152874760691,0,0,0.127612712494584,0,0,0.94443704049192,0.6970372701606,2.15623506123262,1.59691809095107,0.869932992075073,1.29726953372744,1.43124886741991,2.232950216158,4.11293252134344,2.85945290885737,0.255897791311334,0.42793898803392,0,1.56989728039846,4.49681143958287,3.56898138656871,2.12062324222236,2.02182481573316,1.58510321173008,0.421258456238981,0.48763373908959,0.974853958525138,0,0.682499557039929,1.69686518344455,0,0.551365343546124,4.64407282668854,1.31535265576129,0,0,1.01455188481352,3.0982349809975,1.40847801266121,16.3488941512619,1.3754865741837,0.7133421029625,0.709522128141196,0,0.658589785919804,0,0,0,0,0,6.96664125748166,0,0,0,0.229723400206959,1.01489521846434,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,0,20.7238697987298,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,16.9184406105419,0,2.4906390476222,17.718636175429,0,0.852408440419239,0,1.18785872333055,0,0.994147647766298,0,0.333926115068718,0,1.68900326502395,6.5751836122853,2.21027132424918,0,58.3954177087304,0,0.311039587661807,0.539210106883961,0,0,5.32674390439441,0,1.11136990144637,0,0.371072392647405,3.99227596002388,0,0,2.17499872630438,1.0241410345695,0,0,0,4.37406920074882,0,0,0,0,0.221158519862449,0.886642856860642,0.658156191461918,0,0,5.46346835376959,0.113942055847001,0,0,0,0.638002319463839,1.00757352742049,0.533034776018635,0,0,0.166211681900156,0,0,0,0,1.1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| |||
|short_description=p3@UACA | |||
}} |
Revision as of 08:05, 11 September 2013
Short description: | p3@UACA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_UACA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379983, ENST00000558758, ENST00000560441, ENST00000560904, NM_001008224, uc002asq.2, uc010bin.1_5end |
EntrezGene: | UACA |
HGNC: | 15947 |
UniProt: | G3XAG2Q05DB3Q96NH6Q9BZF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.85e-17 | 24 |
endothelial cell | 1.08e-15 | 36 |
lining cell | 4.17e-14 | 58 |
barrier cell | 4.17e-14 | 58 |
mesodermal cell | 1.62e-13 | 121 |
blood vessel endothelial cell | 4.29e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.29e-12 | 18 |
meso-epithelial cell | 3.89e-11 | 45 |
endothelial cell of artery | 2.46e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vasculature | 5.50e-20 | 78 |
vascular system | 5.50e-20 | 78 |
splanchnic layer of lateral plate mesoderm | 6.87e-19 | 83 |
circulatory system | 3.28e-18 | 112 |
cardiovascular system | 3.90e-18 | 109 |
vessel | 2.62e-16 | 68 |
epithelial tube open at both ends | 5.09e-14 | 59 |
blood vessel | 5.09e-14 | 59 |
blood vasculature | 5.09e-14 | 59 |
vascular cord | 5.09e-14 | 59 |
epithelial tube | 6.64e-14 | 117 |
blood vessel endothelium | 4.29e-12 | 18 |
endothelium | 4.29e-12 | 18 |
cardiovascular system endothelium | 4.29e-12 | 18 |
unilaminar epithelium | 9.17e-11 | 148 |
simple squamous epithelium | 9.46e-10 | 22 |
pigment epithelium of eye | 2.57e-09 | 11 |
cell layer | 1.13e-08 | 309 |
trunk | 1.35e-08 | 199 |
epithelium | 1.84e-08 | 306 |
squamous epithelium | 9.01e-08 | 25 |
trunk mesenchyme | 1.84e-07 | 122 |
artery | 1.95e-07 | 42 |
arterial blood vessel | 1.95e-07 | 42 |
arterial system | 1.95e-07 | 42 |
anatomical conduit | 2.06e-07 | 240 |
endothelial tube | 2.46e-07 | 9 |
arterial system endothelium | 2.46e-07 | 9 |
endothelium of artery | 2.46e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.