FFCP PHASE1:Hg19::chr16:736123..736159,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C184|description=CAGE_peak_at_chr16:736123..736159,-|id=chr16:736123..736159,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000167;8.94e-20;1!CL:0000164;8.94e-20;1!CL:0000502;8.94e-20;1!CL:0000172;8.94e-20;1!CL:0000173;8.94e-20;1!CL:0002553;1.71e-19;1!CL:0002535;1.97e-10;2!CL:0000082;3.24e-09;19!CL:0000322;2.05e-07;3!CL:0002231;2.88e-07;3|ontology_enrichment_celltype_v019_2=CL:0000167,8.95e-20,1;CL:0000164,8.95e-20,1;CL:0000502,8.95e-20,1;CL:0000172,8.95e-20,1;CL:0000173,8.95e-20,1;CL:0002351,8.95e-20,1;CL:0002553,1.88e-19,1;CL:0002535,1.89e-10,2;CL:0000082,3.15e-09,19;CL:0000066,6.20e-08,253;CL:0000322,2.05e-07,3;CL:0002231,3.35e-07,3|ontology_enrichment_development_v019=CL:0002351;8.94e-20;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;8.94e-20;1!DOID:1324;1.64e-11;15!DOID:1325;2.62e-11;7!DOID:3904;2.62e-11;7!DOID:0050615;7.84e-11;16!DOID:3910;1.72e-10;2!DOID:3905;5.31e-09;9!DOID:305;6.01e-07;106|ontology_enrichment_disease_v019_2=DOID:4430,8.95e-20,1;DOID:1324,1.58e-11,15;DOID:1325,2.42e-11,7;DOID:3904,2.42e-11,7;DOID:0050615,7.58e-11,16;DOID:3910,1.72e-10,2;DOID:305,1.88e-10,106;DOID:0050687,1.11e-09,143;DOID:3905,5.00e-09,9|ontology_enrichment_uberon=UBERON:0002619!5.69e-13!22;UBERON:0001950!3.54e-12!20;UBERON:0001869!1.92e-11!32;UBERON:0000956!3.72e-11!25;UBERON:0000203!3.72e-11!25;UBERON:0001893!1.34e-10!34;UBERON:0002020!1.39e-10!34;UBERON:0003528!1.39e-10!34;UBERON:0000200!2.90e-10!6;UBERON:0002780!9.69e-10!41;UBERON:0001890!9.69e-10!41;UBERON:0006240!9.69e-10!41;UBERON:0003080!1.97e-09!42;UBERON:0002791!2.59e-09!33;UBERON:0001049!2.72e-08!57;UBERON:0005068!2.72e-08!57;UBERON:0006241!2.72e-08!57;UBERON:0007135!2.72e-08!57;UBERON:0002616!6.96e-08!59;UBERON:0002771!9.15e-08!3;UBERON:0000955!5.95e-07!69;UBERON:0006238!5.95e-07!69;UBERON:0001017!7.37e-07!82;UBERON:0000073!7.86e-07!94;UBERON:0001016!7.86e-07!94|ontology_enrichment_uberon_v019=UBERON:0004903;1.72e-10;2!UBERON:0002173;1.72e-10;2!UBERON:0002186;1.72e-10;2!UBERON:0006955;1.97e-10;2!UBERON:0004801;1.97e-10;2!UBERON:0004802;3.24e-09;19!UBERON:0000115;3.24e-09;19!UBERON:0005911;8.81e-09;36!UBERON:0002048;4.89e-08;22!UBERON:0004807;4.89e-08;22!UBERON:0000117;4.89e-08;22!UBERON:0000171;4.89e-08;22!UBERON:0000170;4.89e-08;22!UBERON:0004821;2.05e-07;3!UBERON:0007499;2.05e-07;3!UBERON:0003215;2.05e-07;3!UBERON:0010368;2.05e-07;3!UBERON:0009911;2.05e-07;3!UBERON:0002299;2.05e-07;3!UBERON:0006524;2.05e-07;3!UBERON:0008874;2.05e-07;3!UBERON:0002169;2.05e-07;3!UBERON:0004894;2.05e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.72e-10,2;UBERON:0002173,1.72e-10,2;UBERON:0002186,1.72e-10,2;UBERON:0006955,1.89e-10,2;UBERON:0004801,1.89e-10,2;UBERON:0004802,3.15e-09,19;UBERON:0000115,3.15e-09,19;UBERON:0005153,3.95e-08,37;UBERON:0002048,4.78e-08,22;UBERON:0000117,4.78e-08,22;UBERON:0000171,4.78e-08,22;UBERON:0000170,4.78e-08,22;UBERON:0005597,4.78e-08,22;UBERON:0000118,4.78e-08,22;UBERON:0004821,2.05e-07,3;UBERON:0003215,2.05e-07,3;UBERON:0010368,2.05e-07,3;UBERON:0009911,2.05e-07,3;UBERON:0002299,2.05e-07,3;UBERON:0006524,2.05e-07,3;UBERON:0008874,2.05e-07,3;UBERON:0002169,2.05e-07,3;UBERON:0004894,2.05e-07,3|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0.94007937463814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77126022639704,0,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,1.2517279311405,3.30529745380596,0.472775363535873,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr16:736123..736159,- | |||
|id=chr16:736123..736159,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;8.94e-20;1!CL:0000164;8.94e-20;1!CL:0000502;8.94e-20;1!CL:0000172;8.94e-20;1!CL:0000173;8.94e-20;1!CL:0002553;1.71e-19;1!CL:0002535;1.97e-10;2!CL:0000082;3.24e-09;19!CL:0000322;2.05e-07;3!CL:0002231;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,8.95e-20,1;CL:0000164,8.95e-20,1;CL:0000502,8.95e-20,1;CL:0000172,8.95e-20,1;CL:0000173,8.95e-20,1;CL:0002351,8.95e-20,1;CL:0002553,1.88e-19,1;CL:0002535,1.89e-10,2;CL:0000082,3.15e-09,19;CL:0000066,6.20e-08,253;CL:0000322,2.05e-07,3;CL:0002231,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;8.94e-20;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;8.94e-20;1!DOID:1324;1.64e-11;15!DOID:1325;2.62e-11;7!DOID:3904;2.62e-11;7!DOID:0050615;7.84e-11;16!DOID:3910;1.72e-10;2!DOID:3905;5.31e-09;9!DOID:305;6.01e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,8.95e-20,1;DOID:1324,1.58e-11,15;DOID:1325,2.42e-11,7;DOID:3904,2.42e-11,7;DOID:0050615,7.58e-11,16;DOID:3910,1.72e-10,2;DOID:305,1.88e-10,106;DOID:0050687,1.11e-09,143;DOID:3905,5.00e-09,9 | |||
|ontology_enrichment_uberon=UBERON:0002619!5.69e-13!22;UBERON:0001950!3.54e-12!20;UBERON:0001869!1.92e-11!32;UBERON:0000956!3.72e-11!25;UBERON:0000203!3.72e-11!25;UBERON:0001893!1.34e-10!34;UBERON:0002020!1.39e-10!34;UBERON:0003528!1.39e-10!34;UBERON:0000200!2.90e-10!6;UBERON:0002780!9.69e-10!41;UBERON:0001890!9.69e-10!41;UBERON:0006240!9.69e-10!41;UBERON:0003080!1.97e-09!42;UBERON:0002791!2.59e-09!33;UBERON:0001049!2.72e-08!57;UBERON:0005068!2.72e-08!57;UBERON:0006241!2.72e-08!57;UBERON:0007135!2.72e-08!57;UBERON:0002616!6.96e-08!59;UBERON:0002771!9.15e-08!3;UBERON:0000955!5.95e-07!69;UBERON:0006238!5.95e-07!69;UBERON:0001017!7.37e-07!82;UBERON:0000073!7.86e-07!94;UBERON:0001016!7.86e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.72e-10;2!UBERON:0002173;1.72e-10;2!UBERON:0002186;1.72e-10;2!UBERON:0006955;1.97e-10;2!UBERON:0004801;1.97e-10;2!UBERON:0004802;3.24e-09;19!UBERON:0000115;3.24e-09;19!UBERON:0005911;8.81e-09;36!UBERON:0002048;4.89e-08;22!UBERON:0004807;4.89e-08;22!UBERON:0000117;4.89e-08;22!UBERON:0000171;4.89e-08;22!UBERON:0000170;4.89e-08;22!UBERON:0004821;2.05e-07;3!UBERON:0007499;2.05e-07;3!UBERON:0003215;2.05e-07;3!UBERON:0010368;2.05e-07;3!UBERON:0009911;2.05e-07;3!UBERON:0002299;2.05e-07;3!UBERON:0006524;2.05e-07;3!UBERON:0008874;2.05e-07;3!UBERON:0002169;2.05e-07;3!UBERON:0004894;2.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.72e-10,2;UBERON:0002173,1.72e-10,2;UBERON:0002186,1.72e-10,2;UBERON:0006955,1.89e-10,2;UBERON:0004801,1.89e-10,2;UBERON:0004802,3.15e-09,19;UBERON:0000115,3.15e-09,19;UBERON:0005153,3.95e-08,37;UBERON:0002048,4.78e-08,22;UBERON:0000117,4.78e-08,22;UBERON:0000171,4.78e-08,22;UBERON:0000170,4.78e-08,22;UBERON:0005597,4.78e-08,22;UBERON:0000118,4.78e-08,22;UBERON:0004821,2.05e-07,3;UBERON:0003215,2.05e-07,3;UBERON:0010368,2.05e-07,3;UBERON:0009911,2.05e-07,3;UBERON:0002299,2.05e-07,3;UBERON:0006524,2.05e-07,3;UBERON:0008874,2.05e-07,3;UBERON:0002169,2.05e-07,3;UBERON:0004894,2.05e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0.94007937463814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77126022639704,0,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,1.2517279311405,3.30529745380596,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.706765357169704,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0,0,0,0,2.40171224485641,0,0,0.128458450192919,0,0.478901577171454,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.543757863814654,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.588901401691458,0,0,0,0,0,0,1.98950775161368,0,0,0,1.96251696636676,0,0,6.1141248526998,0,8.01300260145528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:736123..736159,- | |||
}} |
Revision as of 11:31, 11 September 2013
Short description: | p@chr16:736123..736159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:736123..736159, - |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 8.95e-20 | 1 |
enteroendocrine cell | 8.95e-20 | 1 |
type D enteroendocrine cell | 8.95e-20 | 1 |
somatostatin secreting cell | 8.95e-20 | 1 |
pancreatic D cell | 8.95e-20 | 1 |
progenitor cell of endocrine pancreas | 8.95e-20 | 1 |
lung fibroblast | 1.88e-19 | 1 |
epithelial cell of cervix | 1.89e-10 | 2 |
epithelial cell of lung | 3.15e-09 | 19 |
epithelial cell | 6.20e-08 | 253 |
pneumocyte | 2.05e-07 | 3 |
epithelial cell of prostate | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.72e-10 | 2 |
alveolar duct | 1.72e-10 | 2 |
bronchiole | 1.72e-10 | 2 |
uterine epithelium | 1.89e-10 | 2 |
cervix epithelium | 1.89e-10 | 2 |
respiratory tract epithelium | 3.15e-09 | 19 |
lung epithelium | 3.15e-09 | 19 |
epithelial bud | 3.95e-08 | 37 |
lung | 4.78e-08 | 22 |
respiratory tube | 4.78e-08 | 22 |
respiration organ | 4.78e-08 | 22 |
pair of lungs | 4.78e-08 | 22 |
lung primordium | 4.78e-08 | 22 |
lung bud | 4.78e-08 | 22 |
pulmonary alveolus epithelium | 2.05e-07 | 3 |
alveolus | 2.05e-07 | 3 |
pulmonary lobule | 2.05e-07 | 3 |
lobule | 2.05e-07 | 3 |
alveolus of lung | 2.05e-07 | 3 |
alveolar system | 2.05e-07 | 3 |
pulmonary acinus | 2.05e-07 | 3 |
alveolar sac | 2.05e-07 | 3 |
alveolar wall | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 8.95e-20 | 1 |
lung cancer | 1.58e-11 | 15 |
bronchus cancer | 2.42e-11 | 7 |
bronchogenic carcinoma | 2.42e-11 | 7 |
respiratory system cancer | 7.58e-11 | 16 |
lung adenocarcinoma | 1.72e-10 | 2 |
carcinoma | 1.88e-10 | 106 |
cell type cancer | 1.11e-09 | 143 |
lung carcinoma | 5.00e-09 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.