FFCP PHASE1:Hg19::chr17:66177017..66177028,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C141|description=CAGE_peak_at_chr17:66177017..66177028,+|id=chr17:66177017..66177028,+|ontology_enrichment_celltype=CL:0000542!1.16e-51!53;CL:0000051!1.16e-51!53;CL:0000838!1.01e-49!52;CL:0000738!5.77e-26!140;CL:0002087!7.81e-24!119;CL:0000945!3.70e-23!24;CL:0000826!3.70e-23!24;CL:0000084!3.35e-22!25;CL:0000827!3.35e-22!25;CL:0000236!5.32e-22!14;CL:0000791!7.84e-22!18;CL:0000789!7.84e-22!18;CL:0002420!7.84e-22!18;CL:0002419!7.84e-22!18;CL:0000790!7.84e-22!18;CL:0000037!1.38e-19!172;CL:0000566!1.38e-19!172;CL:0000988!9.22e-18!182;CL:0002031!1.41e-17!124;CL:0002032!9.45e-16!165;CL:0000837!9.45e-16!165;CL:0000625!3.26e-12!11;CL:0000624!1.27e-09!6;CL:0000817!3.09e-07!3;CL:0000767!4.00e-07!3;CL:0000623!5.51e-07!3;CL:0000825!5.51e-07!3|ontology_enrichment_celltype_v019=CL:0000895;1.10e-13;1!CL:0000236;3.26e-09;13!CL:0000542;4.13e-07;53!CL:0000791;8.58e-07;18!CL:0000789;8.58e-07;18!CL:0002419;8.58e-07;18|ontology_enrichment_celltype_v019_2=CL:0000810,1.10e-13,1;CL:0000895,1.10e-13,1;CL:0002436,1.10e-13,1;CL:0002427,1.10e-13,1;CL:0002428,1.10e-13,1;CL:0002429,1.10e-13,1;CL:0002433,1.10e-13,1;CL:0002431,1.10e-13,1;CL:0002432,1.10e-13,1;CL:0000236,1.21e-08,14;CL:0000838,2.56e-08,52;CL:0000542,3.74e-08,53;CL:0000051,3.74e-08,53;CL:0000893,1.75e-07,2;CL:0002489,1.75e-07,2;CL:0000809,1.75e-07,2;CL:0000808,1.75e-07,2;CL:0000894,1.75e-07,2;CL:0000806,1.75e-07,2;CL:0000807,1.75e-07,2;CL:0000805,1.75e-07,2;CL:0002425,1.75e-07,2;CL:0000791,8.49e-07,18;CL:0000789,8.49e-07,18;CL:0002420,8.49e-07,18;CL:0002419,8.49e-07,18;CL:0000790,8.49e-07,18|ontology_enrichment_development_v019=CL:0002427;1.10e-13;1!UBERON:0001045;1.10e-13;1!CL:0002425;1.75e-07;2!UBERON:0006965;1.75e-07;2!CL:0000051;4.13e-07;53!CL:0000790;8.58e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.89e-10!4;UBERON:0005058!2.89e-10!4;UBERON:0009113!2.89e-10!4;UBERON:0003295!2.89e-10!4;UBERON:0005562!2.89e-10!4;UBERON:0004177!2.82e-08!7;UBERON:0000974!9.18e-08!10;UBERON:0003351!8.73e-07!6|ontology_enrichment_uberon_v019=UBERON:0002370;1.67e-26;2!UBERON:0005058;1.67e-26;2!UBERON:0009113;1.67e-26;2!UBERON:0001154;1.10e-13;1!UBERON:0001153;1.10e-13;1!UBERON:0009854;1.10e-13;1!UBERON:0004177;3.36e-11;5!UBERON:0005057;3.36e-11;5|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.83e-29,4;UBERON:0005058,5.83e-29,4;UBERON:0009113,5.83e-29,4;UBERON:0003295,5.83e-29,4;UBERON:0005562,5.83e-29,4;UBERON:0003351,1.51e-19,6;UBERON:0004177,7.53e-17,7;UBERON:0005057,7.53e-17,7;UBERON:0001154,1.83e-13,1;UBERON:0001153,1.83e-13,1;UBERON:0001045,1.83e-13,1;UBERON:0000974,5.60e-12,10;UBERON:0003408,5.60e-12,10;UBERON:0001042,5.60e-12,10;UBERON:0009145,5.60e-12,10;UBERON:0006562,6.10e-11,11;UBERON:0009722,6.10e-11,11;UBERON:0007690,6.10e-11,11;UBERON:0008814,6.95e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.774672005803016,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,0.661044872784862,0,1.70763890732835,2.93618594685469,1.14681968437569,0,0,0.526768169550154,0.590129310341499,0.786021525498329,0.616804496998528,0.167186495390678,0,0.473447805734733,0,0.334231370655521,0.294605907474837,1.10766947291811,0.541607727530031,0.512365278902701,0.130059347559878,0.657751618414705,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,1.14966148080576,1.37450978193052,1.51811815211702,0.318565414324097,1.30216690771284,0,0.150575119077773,0.639933055772092,2.49861453104692,0.947109008176067,0,0,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50487269004906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,1.13929437434833,0.238231775457789,0.822724546172388,0,0,0,0,0,0,0.743212700502875,0.432807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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_at_chr17:66177017..66177028,+ | |||
|id=chr17:66177017..66177028,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.16e-51!53;CL:0000051!1.16e-51!53;CL:0000838!1.01e-49!52;CL:0000738!5.77e-26!140;CL:0002087!7.81e-24!119;CL:0000945!3.70e-23!24;CL:0000826!3.70e-23!24;CL:0000084!3.35e-22!25;CL:0000827!3.35e-22!25;CL:0000236!5.32e-22!14;CL:0000791!7.84e-22!18;CL:0000789!7.84e-22!18;CL:0002420!7.84e-22!18;CL:0002419!7.84e-22!18;CL:0000790!7.84e-22!18;CL:0000037!1.38e-19!172;CL:0000566!1.38e-19!172;CL:0000988!9.22e-18!182;CL:0002031!1.41e-17!124;CL:0002032!9.45e-16!165;CL:0000837!9.45e-16!165;CL:0000625!3.26e-12!11;CL:0000624!1.27e-09!6;CL:0000817!3.09e-07!3;CL:0000767!4.00e-07!3;CL:0000623!5.51e-07!3;CL:0000825!5.51e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000895;1.10e-13;1!CL:0000236;3.26e-09;13!CL:0000542;4.13e-07;53!CL:0000791;8.58e-07;18!CL:0000789;8.58e-07;18!CL:0002419;8.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,1.10e-13,1;CL:0000895,1.10e-13,1;CL:0002436,1.10e-13,1;CL:0002427,1.10e-13,1;CL:0002428,1.10e-13,1;CL:0002429,1.10e-13,1;CL:0002433,1.10e-13,1;CL:0002431,1.10e-13,1;CL:0002432,1.10e-13,1;CL:0000236,1.21e-08,14;CL:0000838,2.56e-08,52;CL:0000542,3.74e-08,53;CL:0000051,3.74e-08,53;CL:0000893,1.75e-07,2;CL:0002489,1.75e-07,2;CL:0000809,1.75e-07,2;CL:0000808,1.75e-07,2;CL:0000894,1.75e-07,2;CL:0000806,1.75e-07,2;CL:0000807,1.75e-07,2;CL:0000805,1.75e-07,2;CL:0002425,1.75e-07,2;CL:0000791,8.49e-07,18;CL:0000789,8.49e-07,18;CL:0002420,8.49e-07,18;CL:0002419,8.49e-07,18;CL:0000790,8.49e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002427;1.10e-13;1!UBERON:0001045;1.10e-13;1!CL:0002425;1.75e-07;2!UBERON:0006965;1.75e-07;2!CL:0000051;4.13e-07;53!CL:0000790;8.58e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.89e-10!4;UBERON:0005058!2.89e-10!4;UBERON:0009113!2.89e-10!4;UBERON:0003295!2.89e-10!4;UBERON:0005562!2.89e-10!4;UBERON:0004177!2.82e-08!7;UBERON:0000974!9.18e-08!10;UBERON:0003351!8.73e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.67e-26;2!UBERON:0005058;1.67e-26;2!UBERON:0009113;1.67e-26;2!UBERON:0001154;1.10e-13;1!UBERON:0001153;1.10e-13;1!UBERON:0009854;1.10e-13;1!UBERON:0004177;3.36e-11;5!UBERON:0005057;3.36e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.83e-29,4;UBERON:0005058,5.83e-29,4;UBERON:0009113,5.83e-29,4;UBERON:0003295,5.83e-29,4;UBERON:0005562,5.83e-29,4;UBERON:0003351,1.51e-19,6;UBERON:0004177,7.53e-17,7;UBERON:0005057,7.53e-17,7;UBERON:0001154,1.83e-13,1;UBERON:0001153,1.83e-13,1;UBERON:0001045,1.83e-13,1;UBERON:0000974,5.60e-12,10;UBERON:0003408,5.60e-12,10;UBERON:0001042,5.60e-12,10;UBERON:0009145,5.60e-12,10;UBERON:0006562,6.10e-11,11;UBERON:0009722,6.10e-11,11;UBERON:0007690,6.10e-11,11;UBERON:0008814,6.95e-07,18 | |||
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|short_description=p@chr17:66177017..66177028,+ | |||
}} |
Revision as of 15:11, 11 September 2013
Short description: | p@chr17:66177017..66177028, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:66177017..66177028, + |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.83e-29 | 4 |
hemolymphoid system gland | 5.83e-29 | 4 |
thymic region | 5.83e-29 | 4 |
pharyngeal gland | 5.83e-29 | 4 |
thymus primordium | 5.83e-29 | 4 |
pharyngeal epithelium | 1.51e-19 | 6 |
hemopoietic organ | 7.53e-17 | 7 |
immune organ | 7.53e-17 | 7 |
vermiform appendix | 1.83e-13 | 1 |
caecum | 1.83e-13 | 1 |
midgut | 1.83e-13 | 1 |
neck | 5.60e-12 | 10 |
gland of gut | 5.60e-12 | 10 |
chordate pharynx | 5.60e-12 | 10 |
pharyngeal region of foregut | 5.60e-12 | 10 |
pharynx | 6.10e-11 | 11 |
entire pharyngeal arch endoderm | 6.10e-11 | 11 |
early pharyngeal endoderm | 6.10e-11 | 11 |
pharyngeal arch system | 6.95e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.