FFCP PHASE1:Hg19::chr18:21594540..21594569,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=125488|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26595|TSSclassifier=W|UniProt=Q8N584|association_with_transcript=156bp_to_ENST00000317571,NM_001135993,NM_001243425,uc002kuv.2,uc002kuw.2_5end|coexpression_cluster_id=C18|description=CAGE_peak_4_at_TTC39C_5end|id=chr18:21594540..21594569,+|ontology_enrichment_celltype=CL:0000838!5.20e-20!52;CL:0000542!7.03e-20!53;CL:0000051!7.03e-20!53;CL:0000791!9.68e-13!18;CL:0000789!9.68e-13!18;CL:0002420!9.68e-13!18;CL:0002419!9.68e-13!18;CL:0000790!9.68e-13!18;CL:0000084!2.62e-11!25;CL:0000827!2.62e-11!25;CL:0000945!2.91e-08!24;CL:0000826!2.91e-08!24;CL:0000625!4.43e-08!11;CL:0002087!4.71e-08!119|ontology_enrichment_celltype_v019=CL:0000791;1.08e-20;18!CL:0000789;1.08e-20;18!CL:0002419;1.08e-20;18!CL:0000542;4.63e-18;53!CL:0000084;2.10e-17;25!CL:0000625;1.05e-12;11!CL:0000945;2.65e-11;24!CL:0000236;2.53e-10;13!CL:0000624;1.24e-08;6|ontology_enrichment_celltype_v019_2=CL:0000838,8.31e-31,52;CL:0000542,6.66e-30,53;CL:0000051,6.66e-30,53;CL:0000791,1.27e-20,18;CL:0000789,1.27e-20,18;CL:0002420,1.27e-20,18;CL:0002419,1.27e-20,18;CL:0000790,1.27e-20,18;CL:0000084,3.87e-17,25;CL:0000827,3.87e-17,25;CL:0002087,9.06e-13,115;CL:0000625,1.12e-12,11;CL:0000945,6.76e-12,24;CL:0000826,6.76e-12,24;CL:0000738,1.75e-11,136;CL:0000037,9.51e-11,168;CL:0000988,1.11e-09,177;CL:0000236,1.21e-09,14;CL:0002031,2.47e-09,120;CL:0000624,1.34e-08,6;CL:0002032,2.78e-08,161;CL:0000837,2.78e-08,161|ontology_enrichment_development_v019=CL:0000790;1.08e-20;18!CL:0000051;4.63e-18;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.37e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;3.53e-07;15!UBERON:0000179;3.53e-07;15!UBERON:0000463;3.53e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.77e-07,15;UBERON:0000179,5.77e-07,15;UBERON:0000463,5.77e-07,15|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0.662794751455832,0,1.20538905604795,0,0.487932798790507,0.369363174230364,0.816002764977012,0,0.286235987131057,0.684372125364421,0,1.98674854944673,1.80621296789881,1.41679406364623,0.786728553697808,1.91914699048606,1.70297735647684,0.919421224478927,0.6024118375565,0.369754010166788,2.32401601740905,0.284338464974843,0.293600439334847,2.76997704265939,1.80490002723128,3.03815219002193,0.447830948479849,2.26725566213286,0.257575567634187,0.290796477559129,0,0.242584061187816,0.697287110717054,0,0,0.575384784644301,1.7931249457037,0.236482229888585,0,0,0,0,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0.329851300186716,0.997318288108159,0.426224750532694,0,1.13477044938228,0,0.75374599577023,0,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0.64290234678832,0.285012743741249,0.19891667719909,0.365328307529268,1.75996244461323,1.63841583378639,3.55803701545422,4.26730222566507,4.00395987036012,3.4485146397269,2.64417949113945,0,11.9534723512984,4.69789751496751,5.3518251937532,1.32171328579026,0.560508562981536,0.790152254325231,13.1795545976268,24.7596780531974,18.9153379079548,11.2014951911754,18.9034914647482,14.6768819777767,23.3792074089494,4.56782873229212,24.1576844129366,17.5011776721061,19.7686820548461,6.78883994546078,7.28332346335318,6.57751618414705,7.73780049800375,8.40428948631652,15.4218025688543,11.5042556078577,31.360657141493,7.81834464613207,15.3288197440768,11.6833331464094,15.9402405972287,9.2383970153988,7.81300144627702,4.75226022224187,7.67933107296641,8.57510294734603,2.49861453104692,9.70786733380469,3.28451198768419,7.66105624253983,7.75576567772171,8.25499102131954,0,0.670700859703636,0.383587685530591,0.722878304769133,1.00267582127178,0.289693037921647,0,0,0,0,0.43917392846563,0.654895377488563,1.45718115317017,1.48313777113772,0,0.174129737299267,0.531831842075461,2.38490624305342,2.28797964312051,4.08603251462521,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,1.43418310374407,0,0,0,0.74000264525148,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.448346041655403,0.704606991862589,0.971237666208789,0,0.204154171254893,0.737005903870608,0.723280468230358,1.18800285728205,1.48360157567134,1.82032272387605,0,0.336672227908132,0.375355559615893,0.831192346452549,0.877955241761676,0.919463387397059,1.05166641234618,0.113432183160021,0.179389635688862,0.640672166455702,0.423863802319124,0.900273288253207,0.309157587715317,0.257640540045629,0,0.337552664482532,0.194874010322397,0.757301322732344,0.184099797284599,0.80823028409406,0,0.10075209822764,0.508681776931463,0,0,0,0.487894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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=125488 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |||
|TSSclassifier=W | |||
|UniProt=Q8N584 | |||
|association_with_transcript=156bp_to_ENST00000317571,NM_001135993,NM_001243425,uc002kuv.2,uc002kuw.2_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_TTC39C_5end | |||
|id=chr18:21594540..21594569,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.20e-20!52;CL:0000542!7.03e-20!53;CL:0000051!7.03e-20!53;CL:0000791!9.68e-13!18;CL:0000789!9.68e-13!18;CL:0002420!9.68e-13!18;CL:0002419!9.68e-13!18;CL:0000790!9.68e-13!18;CL:0000084!2.62e-11!25;CL:0000827!2.62e-11!25;CL:0000945!2.91e-08!24;CL:0000826!2.91e-08!24;CL:0000625!4.43e-08!11;CL:0002087!4.71e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.08e-20;18!CL:0000789;1.08e-20;18!CL:0002419;1.08e-20;18!CL:0000542;4.63e-18;53!CL:0000084;2.10e-17;25!CL:0000625;1.05e-12;11!CL:0000945;2.65e-11;24!CL:0000236;2.53e-10;13!CL:0000624;1.24e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.31e-31,52;CL:0000542,6.66e-30,53;CL:0000051,6.66e-30,53;CL:0000791,1.27e-20,18;CL:0000789,1.27e-20,18;CL:0002420,1.27e-20,18;CL:0002419,1.27e-20,18;CL:0000790,1.27e-20,18;CL:0000084,3.87e-17,25;CL:0000827,3.87e-17,25;CL:0002087,9.06e-13,115;CL:0000625,1.12e-12,11;CL:0000945,6.76e-12,24;CL:0000826,6.76e-12,24;CL:0000738,1.75e-11,136;CL:0000037,9.51e-11,168;CL:0000988,1.11e-09,177;CL:0000236,1.21e-09,14;CL:0002031,2.47e-09,120;CL:0000624,1.34e-08,6;CL:0002032,2.78e-08,161;CL:0000837,2.78e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.08e-20;18!CL:0000051;4.63e-18;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.53e-07;15!UBERON:0000179;3.53e-07;15!UBERON:0000463;3.53e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.77e-07,15;UBERON:0000179,5.77e-07,15;UBERON:0000463,5.77e-07,15 | |||
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| |||
|short_description=p4@TTC39C | |||
}} |
Revision as of 17:02, 11 September 2013
Short description: | p4@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TTC39C_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 156bp_to_ENST00000317571, NM_001135993, NM_001243425, uc002kuv.2, uc002kuw.2_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | Q8N584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.31e-31 | 52 |
lymphocyte | 6.66e-30 | 53 |
common lymphoid progenitor | 6.66e-30 | 53 |
mature alpha-beta T cell | 1.27e-20 | 18 |
alpha-beta T cell | 1.27e-20 | 18 |
immature T cell | 1.27e-20 | 18 |
mature T cell | 1.27e-20 | 18 |
immature alpha-beta T cell | 1.27e-20 | 18 |
T cell | 3.87e-17 | 25 |
pro-T cell | 3.87e-17 | 25 |
nongranular leukocyte | 9.06e-13 | 115 |
CD8-positive, alpha-beta T cell | 1.12e-12 | 11 |
lymphocyte of B lineage | 6.76e-12 | 24 |
pro-B cell | 6.76e-12 | 24 |
leukocyte | 1.75e-11 | 136 |
hematopoietic stem cell | 9.51e-11 | 168 |
hematopoietic cell | 1.11e-09 | 177 |
B cell | 1.21e-09 | 14 |
hematopoietic lineage restricted progenitor cell | 2.47e-09 | 120 |
CD4-positive, alpha-beta T cell | 1.34e-08 | 6 |
hematopoietic oligopotent progenitor cell | 2.78e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.78e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 5.77e-07 | 15 |
haemolymphatic fluid | 5.77e-07 | 15 |
organism substance | 5.77e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.