FFCP PHASE1:Hg19::chr19:18415466..18415480,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1032|description=CAGE_peak_at_chr19:18415466..18415480,-|id=chr19:18415466..18415480,-|ontology_enrichment_celltype=CL:0000738!4.24e-26!140;CL:0000037!1.22e-24!172;CL:0000566!1.22e-24!172;CL:0002032!2.75e-23!165;CL:0000837!2.75e-23!165;CL:0000988!3.66e-23!182;CL:0002031!1.40e-21!124;CL:0002087!2.77e-20!119;CL:0000860!1.74e-16!45;CL:0002057!1.94e-15!42;CL:0000766!1.20e-13!76;CL:0000763!4.51e-13!112;CL:0000049!4.51e-13!112;CL:0000557!1.14e-12!71;CL:0000839!2.62e-11!70;CL:0000838!1.14e-10!52;CL:0000542!2.89e-10!53;CL:0000051!2.89e-10!53;CL:0002009!5.89e-09!65;CL:0002194!6.33e-09!63;CL:0000576!6.33e-09!63;CL:0000040!6.33e-09!63;CL:0000559!6.33e-09!63;CL:0000791!1.24e-07!18;CL:0000789!1.24e-07!18;CL:0002420!1.24e-07!18;CL:0002419!1.24e-07!18;CL:0000790!1.24e-07!18;CL:0002393!1.83e-07!9;CL:0002397!1.83e-07!9;CL:0000134!5.26e-07!358;CL:0000624!5.40e-07!6|ontology_enrichment_celltype_v019=CL:0000624;5.16e-24;6!CL:0000791;1.38e-19;18!CL:0000789;1.38e-19;18!CL:0002419;1.38e-19;18!CL:0000097;1.47e-19;5!CL:0000623;3.84e-19;3!CL:0000084;9.11e-14;25!CL:0000163;6.35e-11;9!CL:0000542;4.77e-10;53!CL:0000898;1.81e-08;3!CL:0002032;5.77e-07;1!CL:0000557;5.77e-07;1!CL:0000895;5.77e-07;1|ontology_enrichment_celltype_v019_2=CL:0000624,3.21e-24,6;CL:0000791,8.86e-20,18;CL:0000789,8.86e-20,18;CL:0002420,8.86e-20,18;CL:0002419,8.86e-20,18;CL:0000790,8.86e-20,18;CL:0000097,1.38e-19,5;CL:0002028,1.38e-19,5;CL:0000623,3.98e-19,3;CL:0000825,3.98e-19,3;CL:0002031,1.22e-18,120;CL:0000738,1.16e-17,136;CL:0002032,2.80e-17,161;CL:0000837,2.80e-17,161;CL:0000988,8.29e-17,177;CL:0000838,1.86e-16,52;CL:0000037,2.39e-16,168;CL:0000542,4.27e-16,53;CL:0000051,4.27e-16,53;CL:0000084,6.66e-14,25;CL:0000827,6.66e-14,25;CL:0002087,2.64e-12,115;CL:0000163,6.13e-11,9;CL:0000898,1.02e-08,3;CL:0000810,3.82e-07,1;CL:0000895,3.82e-07,1;CL:0002436,3.82e-07,1;CL:0002427,3.82e-07,1;CL:0002428,3.82e-07,1;CL:0002429,3.82e-07,1;CL:0002433,3.82e-07,1;CL:0002431,3.82e-07,1;CL:0002432,3.82e-07,1|ontology_enrichment_development_v019=CL:0000790;1.38e-19;18!CL:0000051;4.77e-10;53!CL:0002427;5.77e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.63e-12!102;UBERON:0003061!5.63e-12!102;UBERON:0002193!1.67e-10!112;UBERON:0001474!8.95e-10!86;UBERON:0002371!1.04e-09!80;UBERON:0002405!3.21e-08!115;UBERON:0004765!6.28e-07!101;UBERON:0001434!6.28e-07!101|ontology_enrichment_uberon_v019=UBERON:0002134;5.77e-07;1!UBERON:0005208;5.77e-07;1!UBERON:0004145;5.77e-07;1!UBERON:0005946;5.77e-07;1!UBERON:0005965;5.77e-07;1!UBERON:0002078;5.77e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002134,4.31e-07,1;UBERON:0005208,4.31e-07,1;UBERON:0005946,4.31e-07,1;UBERON:0005965,4.31e-07,1;UBERON:0002078,4.31e-07,1|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.687720651731561,0.246301768349837,1.18066171970519,0.393364276848904,1.91914699048606,0.464448369948228,0,0,0,0,0,0,0.553995408531877,1.20326668482085,1.30206522429511,0,0,0,0.290796477559129,1.51150377475524,0,0,0.411167888021826,0.309706370895104,0.863077176966451,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0.818718450173537,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0.580418477257168,1.13477044938228,0,1.00499466102697,0,0.217188844705117,0,0,0.949387162322653,0.422510572623884,0.212604299965044,0.628975936525128,0.22465726229299,0.300353785683013,0.48217676009124,0.855038231223746,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0.587237189370939,1.14681968437569,0,0.560508562981536,0,3.14735632182133,1.17903228824749,3.28962398399215,0.501559486172034,1.62961133316795,0.473447805734733,0,0.779873198196215,0.294605907474837,0.221533894583621,0.812411591295047,1.0247305578054,1.04047478047903,0.328875809207352,0.276350017785848,0.289803085735052,1.18629250529648,0.802622484269139,1.04535523804977,0.453237370790265,1.53288197440768,1.03088233644789,0.759059076058509,0,0.651083453856419,0.950452044448374,0.150575119077773,0.383959833463255,0,0,0,4.03213486449465,3.20928234940209,1.73789284659359,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.196468613246569,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0.18611685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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1032 | |||
|description=CAGE_peak_at_chr19:18415466..18415480,- | |||
|id=chr19:18415466..18415480,- | |||
|ontology_enrichment_celltype=CL:0000738!4.24e-26!140;CL:0000037!1.22e-24!172;CL:0000566!1.22e-24!172;CL:0002032!2.75e-23!165;CL:0000837!2.75e-23!165;CL:0000988!3.66e-23!182;CL:0002031!1.40e-21!124;CL:0002087!2.77e-20!119;CL:0000860!1.74e-16!45;CL:0002057!1.94e-15!42;CL:0000766!1.20e-13!76;CL:0000763!4.51e-13!112;CL:0000049!4.51e-13!112;CL:0000557!1.14e-12!71;CL:0000839!2.62e-11!70;CL:0000838!1.14e-10!52;CL:0000542!2.89e-10!53;CL:0000051!2.89e-10!53;CL:0002009!5.89e-09!65;CL:0002194!6.33e-09!63;CL:0000576!6.33e-09!63;CL:0000040!6.33e-09!63;CL:0000559!6.33e-09!63;CL:0000791!1.24e-07!18;CL:0000789!1.24e-07!18;CL:0002420!1.24e-07!18;CL:0002419!1.24e-07!18;CL:0000790!1.24e-07!18;CL:0002393!1.83e-07!9;CL:0002397!1.83e-07!9;CL:0000134!5.26e-07!358;CL:0000624!5.40e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;5.16e-24;6!CL:0000791;1.38e-19;18!CL:0000789;1.38e-19;18!CL:0002419;1.38e-19;18!CL:0000097;1.47e-19;5!CL:0000623;3.84e-19;3!CL:0000084;9.11e-14;25!CL:0000163;6.35e-11;9!CL:0000542;4.77e-10;53!CL:0000898;1.81e-08;3!CL:0002032;5.77e-07;1!CL:0000557;5.77e-07;1!CL:0000895;5.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.21e-24,6;CL:0000791,8.86e-20,18;CL:0000789,8.86e-20,18;CL:0002420,8.86e-20,18;CL:0002419,8.86e-20,18;CL:0000790,8.86e-20,18;CL:0000097,1.38e-19,5;CL:0002028,1.38e-19,5;CL:0000623,3.98e-19,3;CL:0000825,3.98e-19,3;CL:0002031,1.22e-18,120;CL:0000738,1.16e-17,136;CL:0002032,2.80e-17,161;CL:0000837,2.80e-17,161;CL:0000988,8.29e-17,177;CL:0000838,1.86e-16,52;CL:0000037,2.39e-16,168;CL:0000542,4.27e-16,53;CL:0000051,4.27e-16,53;CL:0000084,6.66e-14,25;CL:0000827,6.66e-14,25;CL:0002087,2.64e-12,115;CL:0000163,6.13e-11,9;CL:0000898,1.02e-08,3;CL:0000810,3.82e-07,1;CL:0000895,3.82e-07,1;CL:0002436,3.82e-07,1;CL:0002427,3.82e-07,1;CL:0002428,3.82e-07,1;CL:0002429,3.82e-07,1;CL:0002433,3.82e-07,1;CL:0002431,3.82e-07,1;CL:0002432,3.82e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.38e-19;18!CL:0000051;4.77e-10;53!CL:0002427;5.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.63e-12!102;UBERON:0003061!5.63e-12!102;UBERON:0002193!1.67e-10!112;UBERON:0001474!8.95e-10!86;UBERON:0002371!1.04e-09!80;UBERON:0002405!3.21e-08!115;UBERON:0004765!6.28e-07!101;UBERON:0001434!6.28e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.77e-07;1!UBERON:0005208;5.77e-07;1!UBERON:0004145;5.77e-07;1!UBERON:0005946;5.77e-07;1!UBERON:0005965;5.77e-07;1!UBERON:0002078;5.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,4.31e-07,1;UBERON:0005208,4.31e-07,1;UBERON:0005946,4.31e-07,1;UBERON:0005965,4.31e-07,1;UBERON:0002078,4.31e-07,1 | |||
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| |||
|short_description=p@chr19:18415466..18415480,- | |||
}} |
Revision as of 19:26, 11 September 2013
Short description: | p@chr19:18415466..18415480, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:18415466..18415480, - |
Coexpression cluster: | C1032_Mast_Natural_CD4_CD8_CD19_Basophils_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 4.31e-07 | 1 |
right atrium valve | 4.31e-07 | 1 |
outflow tract of atrium | 4.31e-07 | 1 |
outflow part of right atrium | 4.31e-07 | 1 |
right cardiac atrium | 4.31e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.