FFCP PHASE1:Hg19::chr19:44172410..44172459,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5329|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9053|TSSclassifier=S|UniProt=|association_with_transcript=-2bp_to_uc002oxe.1_5end|description=CAGE_peak_4_at_PLAUR_5end|id=chr19:44172410..44172459,-|ontology_enrichment_celltype=CL:0002319!7.60e-07!25|ontology_enrichment_celltype_v019=CL:0002319;8.50e-10;25!CL:0002322;1.98e-09;5!CL:0002321;8.97e-09;15!CL:0002605;3.74e-07;3|ontology_enrichment_celltype_v019_2=CL:0002319,1.08e-09,25;CL:0000133,2.56e-09,59;CL:0002322,4.35e-09,5;CL:0000333,1.29e-07,41;CL:0002605,4.41e-07,3;CL:0000221,9.87e-07,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1240!5.95e-09!39;DOID:8692!2.43e-08!31|ontology_enrichment_disease_v019=DOID:1036;2.82e-09;8!DOID:8692;1.11e-07;31!DOID:1240;1.78e-07;39!DOID:171;6.53e-07;10|ontology_enrichment_disease_v019_2=DOID:1240,2.76e-09,39;DOID:1036,3.00e-09,8;DOID:8692,5.57e-08,31;DOID:171,3.99e-07,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002050;8.15e-10;5!UBERON:0005423;8.15e-10;5!UBERON:0002346;2.01e-08;4!UBERON:0000923;2.01e-08;4!UBERON:0010316;2.01e-08;4!UBERON:0005291;2.01e-08;4|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.655324116390517,0,0,0,0,0,0,0,1.10808952269109,0.816002764977012,0,2.0036519099174,3.69560947696787,4.5195350254129,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,2.64240395401362,0.553995408531877,0,0,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0.619412741790207,0.28769239232215,0,0.236482229888585,1.37898272294647,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.918251677112708,0,1.91801137739712,0,0,0.426224750532694,0,0,1.24564449799115,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.84368859342554,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,1.41802225746102,0.221729397462564,0.527008714158756,0.0654895377488563,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0.417989933073621,0.516833518338658,0.35576626268671,1.00416183829401,0,0,0.976248230192678,0,0,1.16089646769304,0.673588117878509,0.900891843866578,0,0,0.549605231791222,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,1.29177948508141,0.323745888736263,0.421352420106746,0.204154171254893,0.368502951935304,0,1.18800285728205,0.247266929278557,0,0,1.34668891163253,2.00189631795143,0,0.438977620880838,0,0.45071417671979,0.567160915800105,1.07633781413317,0,0,0.600182192168805,0,0,0,1.5189869901714,0.194874010322397,0.504867548488229,0,0.161646056818812,1.06502877754984,0.503760491138201,0.169560592310488,0,0,0,2.19552671033272,3.18071443971565,1.51052125730374,1.0366105501537,1.00928340350251,1.09493207722749,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0.201057944823262,0.277765335475589,0.651616610620649,1.03993478527958,1.44331342025273,1.04337364477569,0,0.577465791044295,0.462985512576611,0.951270761172991,0,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.44024217006613,0.621984346622316,0,0.25248486685276,1.8414389344729,0,0,0,1.02827492703324,0.300343057843917,0.571652865261156,0.336393253036082,0.43596006883328,0.1466765716419,0,0,0,0,0,1.28603687131071,2.83698264046557,1.0656887160644,0.142977993658148,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0.289562613335158,0.205476322550383,1.25342674267927,0,0,0,0,1.27047312111232,0,0,1.00509759200609,0.637938751653163,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0.303127571446259,0,2.11673205330776,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0.902399225814824,0.231046011313244,3.92174884588428,0,0.422206515571503,0,0.170093705276516,0.215915916102139,0,0.812839312631559,1.00337954770971,0.509752546090077,0,1.56712328305525,2.41185864310528,2.0914836081992,0.256450125116389,0.984043937099117,0,0.103041011647722,0.54941678891006,0.495056999523528,0,0,0,0.290012154876366,0.616194468458578,0.307007349452259,0.689182862422653,0.751941714077915,0.435050081742686,0.852266274161009,0.445160178233687,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,2.65631221636001,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5329 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9053 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_uc002oxe.1_5end | |||
|description=CAGE_peak_4_at_PLAUR_5end | |||
|id=chr19:44172410..44172459,- | |||
|ontology_enrichment_celltype=CL:0002319!7.60e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.50e-10;25!CL:0002322;1.98e-09;5!CL:0002321;8.97e-09;15!CL:0002605;3.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.08e-09,25;CL:0000133,2.56e-09,59;CL:0002322,4.35e-09,5;CL:0000333,1.29e-07,41;CL:0002605,4.41e-07,3;CL:0000221,9.87e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!5.95e-09!39;DOID:8692!2.43e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.82e-09;8!DOID:8692;1.11e-07;31!DOID:1240;1.78e-07;39!DOID:171;6.53e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.76e-09,39;DOID:1036,3.00e-09,8;DOID:8692,5.57e-08,31;DOID:171,3.99e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;8.15e-10;5!UBERON:0005423;8.15e-10;5!UBERON:0002346;2.01e-08;4!UBERON:0000923;2.01e-08;4!UBERON:0010316;2.01e-08;4!UBERON:0005291;2.01e-08;4 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@PLAUR | |||
}} |
Revision as of 21:02, 11 September 2013
Short description: | p4@PLAUR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PLAUR_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_uc002oxe.1_5end |
EntrezGene: | PLAUR |
HGNC: | 9053 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.08e-09 | 25 |
neurectodermal cell | 2.56e-09 | 59 |
embryonic stem cell | 4.35e-09 | 5 |
migratory neural crest cell | 1.29e-07 | 41 |
astrocyte of the cerebral cortex | 4.41e-07 | 3 |
ectodermal cell | 9.87e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.76e-09 | 39 |
chronic leukemia | 3.00e-09 | 8 |
myeloid leukemia | 5.57e-08 | 31 |
neuroectodermal tumor | 3.99e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.