FFCP PHASE1:Hg19::chr19:48759097..48759113,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22900|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17057|TSSclassifier=S|UniProt=E5RJG3|association_with_transcript=14bp_to_ENST00000522889_5end|description=CAGE_peak_5_at_CARD8_5end|id=chr19:48759097..48759113,-|ontology_enrichment_celltype=CL:0000542!3.26e-18!53;CL:0000051!3.26e-18!53;CL:0000838!1.14e-17!52;CL:0000084!5.83e-13!25;CL:0000827!5.83e-13!25;CL:0000791!1.94e-11!18;CL:0000789!1.94e-11!18;CL:0002420!1.94e-11!18;CL:0002419!1.94e-11!18;CL:0000790!1.94e-11!18;CL:0000037!2.41e-10!172;CL:0000566!2.41e-10!172;CL:0000988!3.31e-10!182;CL:0002032!2.86e-09!165;CL:0000837!2.86e-09!165;CL:0000625!7.48e-08!11;CL:0002087!3.51e-07!119;CL:0000738!6.36e-07!140|ontology_enrichment_celltype_v019=CL:0000084;4.65e-26;25!CL:0000791;7.23e-23;18!CL:0000789;7.23e-23;18!CL:0002419;7.23e-23;18!CL:0000542;3.51e-17;53!CL:0000625;3.88e-15;11!CL:0000624;4.24e-08;6!CL:0000945;3.87e-07;24|ontology_enrichment_celltype_v019_2=CL:0000542,1.70e-29,53;CL:0000051,1.70e-29,53;CL:0000838,2.07e-28,52;CL:0000084,1.37e-25,25;CL:0000827,1.37e-25,25;CL:0000791,1.79e-22,18;CL:0000789,1.79e-22,18;CL:0002420,1.79e-22,18;CL:0002419,1.79e-22,18;CL:0000790,1.79e-22,18;CL:0000988,4.42e-15,177;CL:0000625,7.01e-15,11;CL:0000037,1.59e-14,168;CL:0002032,1.94e-14,161;CL:0000837,1.94e-14,161;CL:0000738,5.70e-13,136;CL:0002087,2.08e-11,115;CL:0002031,3.24e-10,120;CL:0000624,6.21e-08,6;CL:0000945,2.18e-07,24;CL:0000826,2.18e-07,24|ontology_enrichment_development_v019=CL:0000790;7.23e-23;18!CL:0000051;3.51e-17;53|ontology_enrichment_disease=DOID:2531!8.31e-09!51;DOID:0060083!8.31e-09!51;DOID:162!1.18e-08!235;DOID:14566!1.26e-08!239;DOID:1240!8.45e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2531,8.37e-07,51;DOID:0060083,8.37e-07,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.19e-07,4;UBERON:0005058,7.19e-07,4;UBERON:0009113,7.19e-07,4;UBERON:0003295,7.19e-07,4;UBERON:0005562,7.19e-07,4|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0.436882744260345,0.527533956456907,0.618831764800233,0.331397375727916,2.01697543935533,0,0,0.975865597581014,0.369363174230364,0.204000691244253,0,2.28988789704845,0.821246550437305,0.627713197974014,1.29902789771517,1.23150884174919,1.10195093839151,1.96682138424452,1.15148819429164,0,0,0,0.369754010166788,0.46480320348181,0.995184627411951,0.587200878669695,0,0.200544447470142,0,1.11957737119962,1.29557466407592,0.257575567634187,0,0.755751887377619,0,0,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0,0,0.368277635987565,0.632924774881769,0.422510572623884,0.212604299965044,0,0.673971786878971,0.450530678524519,0.48217676009124,0.570025487482497,0.39783335439818,0,1.75996244461323,0.546138611262131,2.66852776159066,0,1.20118796110804,0.574752439954483,1.98313461835459,1.90810750907073,1.70763890732835,0,0.382273228125229,0,0.560508562981536,0.526768169550154,1.57367816091066,1.17903228824749,1.02800749499755,7.52339229258051,2.93330039970231,2.36723902867367,1.94826728407911,4.56782873229212,2.94605907474837,2.43687284041983,1.08321545506006,1.5370958367081,2.21100890851793,1.97325485524411,4.14525026678773,3.47763702882063,3.41059095272739,5.61835738988397,3.1360657141493,3.28597093822942,4.21542542962113,1.71813722741315,2.78321661221453,2.54852331459277,4.55758417699493,4.75226022224187,2.25862678616659,3.19966527886046,3.74792179657038,3.55165878066025,6.56902397536837,1.20964045934839,1.06976078313403,1.59306844271079,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0.472674085820339,0.886917589850256,0.614843499851882,0.130979075497713,0,0,0,0.522389211897802,0.26591592103773,0.715471872916026,0.571994910780128,0.371457501329565,0.39752481473341,0,0.347140501607594,1.13061588384802,0.419499436209906,0.275118041940067,0.835979866147242,0,1.42306505074684,0,0.402829317109147,1.52054421143703,1.22031028774085,0,0,0.535798369704479,0.22452937262617,0.788280363383256,0,0,0.549605231791222,2.63560834872127,0,0,0.496971951695318,0.25326102332916,0.662045904066094,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0,0.454072282934794,0.576175924479999,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0.485618833104395,0.421352420106746,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0.910161361938026,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0.30648779579902,0.150238058906597,0.567160915800105,0.358779271377724,0.427114777637135,0.423863802319124,1.20036438433761,0.515262646192195,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.504867548488229,0.460249493211497,0.161646056818812,0,0.80601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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17057 | |||
|TSSclassifier=S | |||
|UniProt=E5RJG3 | |||
|association_with_transcript=14bp_to_ENST00000522889_5end | |||
|description=CAGE_peak_5_at_CARD8_5end | |||
|id=chr19:48759097..48759113,- | |||
|ontology_enrichment_celltype=CL:0000542!3.26e-18!53;CL:0000051!3.26e-18!53;CL:0000838!1.14e-17!52;CL:0000084!5.83e-13!25;CL:0000827!5.83e-13!25;CL:0000791!1.94e-11!18;CL:0000789!1.94e-11!18;CL:0002420!1.94e-11!18;CL:0002419!1.94e-11!18;CL:0000790!1.94e-11!18;CL:0000037!2.41e-10!172;CL:0000566!2.41e-10!172;CL:0000988!3.31e-10!182;CL:0002032!2.86e-09!165;CL:0000837!2.86e-09!165;CL:0000625!7.48e-08!11;CL:0002087!3.51e-07!119;CL:0000738!6.36e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.65e-26;25!CL:0000791;7.23e-23;18!CL:0000789;7.23e-23;18!CL:0002419;7.23e-23;18!CL:0000542;3.51e-17;53!CL:0000625;3.88e-15;11!CL:0000624;4.24e-08;6!CL:0000945;3.87e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.70e-29,53;CL:0000051,1.70e-29,53;CL:0000838,2.07e-28,52;CL:0000084,1.37e-25,25;CL:0000827,1.37e-25,25;CL:0000791,1.79e-22,18;CL:0000789,1.79e-22,18;CL:0002420,1.79e-22,18;CL:0002419,1.79e-22,18;CL:0000790,1.79e-22,18;CL:0000988,4.42e-15,177;CL:0000625,7.01e-15,11;CL:0000037,1.59e-14,168;CL:0002032,1.94e-14,161;CL:0000837,1.94e-14,161;CL:0000738,5.70e-13,136;CL:0002087,2.08e-11,115;CL:0002031,3.24e-10,120;CL:0000624,6.21e-08,6;CL:0000945,2.18e-07,24;CL:0000826,2.18e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;7.23e-23;18!CL:0000051;3.51e-17;53 | |||
|ontology_enrichment_disease=DOID:2531!8.31e-09!51;DOID:0060083!8.31e-09!51;DOID:162!1.18e-08!235;DOID:14566!1.26e-08!239;DOID:1240!8.45e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.37e-07,51;DOID:0060083,8.37e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.19e-07,4;UBERON:0005058,7.19e-07,4;UBERON:0009113,7.19e-07,4;UBERON:0003295,7.19e-07,4;UBERON:0005562,7.19e-07,4 | |||
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| |||
|short_description=p5@CARD8 | |||
}} |
Revision as of 21:35, 11 September 2013
Short description: | p5@CARD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CARD8_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000522889_5end |
EntrezGene: | CARD8 |
HGNC: | 17057 |
UniProt: | E5RJG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.70e-29 | 53 |
common lymphoid progenitor | 1.70e-29 | 53 |
lymphoid lineage restricted progenitor cell | 2.07e-28 | 52 |
T cell | 1.37e-25 | 25 |
pro-T cell | 1.37e-25 | 25 |
mature alpha-beta T cell | 1.79e-22 | 18 |
alpha-beta T cell | 1.79e-22 | 18 |
immature T cell | 1.79e-22 | 18 |
mature T cell | 1.79e-22 | 18 |
immature alpha-beta T cell | 1.79e-22 | 18 |
hematopoietic cell | 4.42e-15 | 177 |
CD8-positive, alpha-beta T cell | 7.01e-15 | 11 |
hematopoietic stem cell | 1.59e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.94e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-14 | 161 |
leukocyte | 5.70e-13 | 136 |
nongranular leukocyte | 2.08e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 3.24e-10 | 120 |
CD4-positive, alpha-beta T cell | 6.21e-08 | 6 |
lymphocyte of B lineage | 2.18e-07 | 24 |
pro-B cell | 2.18e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.19e-07 | 4 |
hemolymphoid system gland | 7.19e-07 | 4 |
thymic region | 7.19e-07 | 4 |
pharyngeal gland | 7.19e-07 | 4 |
thymus primordium | 7.19e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.37e-07 | 51 |
immune system cancer | 8.37e-07 | 51 |
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