FFCP PHASE1:Hg19::chr2:81708853..81708884,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4246|description=CAGE_peak_at_chr2:81708853..81708884,+|id=chr2:81708853..81708884,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,7.01e-07,253|ontology_enrichment_development_v019=UBERON:0008947;2.34e-12;29!UBERON:0006595;5.16e-08;86|ontology_enrichment_disease=DOID:0050687!1.06e-20!143;DOID:162!6.74e-20!235;DOID:14566!1.53e-19!239;DOID:305!4.01e-18!106;DOID:1749!1.12e-09!14|ontology_enrichment_disease_v019=DOID:1749;1.47e-12;14!DOID:0050687;2.16e-09;143!DOID:1036;4.95e-07;8|ontology_enrichment_disease_v019_2=DOID:0050687,1.08e-32,143;DOID:162,2.08e-31,235;DOID:14566,2.19e-30,239;DOID:305,3.27e-26,106;DOID:1749,1.59e-12,14;DOID:0050686,1.32e-07,137;DOID:1036,4.98e-07,8|ontology_enrichment_uberon=UBERON:0001737!3.00e-11!9;UBERON:0005631!1.61e-07!14;UBERON:0000158!1.61e-07!14;UBERON:0004119!7.41e-07!169;UBERON:0000925!7.41e-07!169;UBERON:0006595!7.41e-07!169|ontology_enrichment_uberon_v019=UBERON:0001737;1.95e-19;9!UBERON:0001557;1.95e-19;9!UBERON:0000072;1.70e-08;37|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.23e-19,9;UBERON:0001557,3.87e-10,19;UBERON:0004119,6.00e-09,160;UBERON:0000925,6.00e-09,160;UBERON:0006595,6.00e-09,160;UBERON:0008947,1.35e-08,38;UBERON:0003258,1.35e-08,38;UBERON:0001007,8.56e-08,145;UBERON:0001555,8.56e-08,145;UBERON:0007026,8.56e-08,145;UBERON:0000072,2.11e-07,47;UBERON:0001041,3.52e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.309977343527296,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79703320195235,5.39471008249925,3.85617647813571,6.28675644574646,4.13970943775572,4.50814176311084,5.79774625088707,5.69042248863504,4.23221872641029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.320182673410333,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0.824328093181778,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.429680979473094,0,0,0,0,0,0,0,3.71876439437829,1.88887408098384,4.8792608911242,0,0,1.73986598415015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,6.86112604746889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.839590860848,0,0,0,0,2.78406173895242,0,0.540911356951966,0,0,1.12284324244932,0,7.28163130497081,6.79804644092618,0,0.71623345421307,0.593929361665277,0.307160702099232,0,0,1.00177834520615,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0,0,2.22273980289274,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,17.2371686620732,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,34.1826167541004,0.46112780877612,2.2439411102443,11.5166214237329,1.27600463892768,0.457987967009312,3.73124343213044,0,0,0,2.48155226678899,2.54881294613061,3.02078856556517,22.2011867287297,0.158936578980379,7.59593032300897,0.163232808159148,0,33.7566277997662,0,0,0,0,0,0,0,0,0.234264445725339,0,19.566461893209,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,3.5277263069176,0,0,0,0,0.0730893170861856,0,0,0,0,0.137041924646751,7.7498698564166,0,29.1371560274856,25.5706636602393,0,14.5861014994955,0,13.2862451552462,0,0,0,0,0,0,0.101998217636322,14.7364800849775,0,0,0,0,0,1.11712960508902,0,0,0,0,0,0.335917362433631,0,0,0,0.164831716762333,0.202210631562555,4.92137407573744,0,0,0,0,0,0,0,0,0.0607495566580247,10.7339100031765,0.0788057072991982,0.104909176269996,0,0,3.26255835443057,0.714695326373367,0,0.25426853765475,0,0,0,4.7892076624995,8.78389972017927,0,6.79872549120754,0,0,0,0,5.98803932595153,2.11444506695002,0,0.314408610199332,0,0,5.3355140612445,0,9.57511886655273,0,0,0,0,29.0550078062933,0,0,0,0.573409195690071,0,0,0,7.498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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4246 | |||
|description=CAGE_peak_at_chr2:81708853..81708884,+ | |||
|id=chr2:81708853..81708884,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.01e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.34e-12;29!UBERON:0006595;5.16e-08;86 | |||
|ontology_enrichment_disease=DOID:0050687!1.06e-20!143;DOID:162!6.74e-20!235;DOID:14566!1.53e-19!239;DOID:305!4.01e-18!106;DOID:1749!1.12e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.47e-12;14!DOID:0050687;2.16e-09;143!DOID:1036;4.95e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.08e-32,143;DOID:162,2.08e-31,235;DOID:14566,2.19e-30,239;DOID:305,3.27e-26,106;DOID:1749,1.59e-12,14;DOID:0050686,1.32e-07,137;DOID:1036,4.98e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.00e-11!9;UBERON:0005631!1.61e-07!14;UBERON:0000158!1.61e-07!14;UBERON:0004119!7.41e-07!169;UBERON:0000925!7.41e-07!169;UBERON:0006595!7.41e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.95e-19;9!UBERON:0001557;1.95e-19;9!UBERON:0000072;1.70e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.23e-19,9;UBERON:0001557,3.87e-10,19;UBERON:0004119,6.00e-09,160;UBERON:0000925,6.00e-09,160;UBERON:0006595,6.00e-09,160;UBERON:0008947,1.35e-08,38;UBERON:0003258,1.35e-08,38;UBERON:0001007,8.56e-08,145;UBERON:0001555,8.56e-08,145;UBERON:0007026,8.56e-08,145;UBERON:0000072,2.11e-07,47;UBERON:0001041,3.52e-07,87 | |||
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|short_description=p@chr2:81708853..81708884,+ | |||
}} |
Revision as of 19:55, 12 September 2013
Short description: | p@chr2:81708853..81708884, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:81708853..81708884, + |
Coexpression cluster: | C4246_colon_melanoma_cholangiocellular_gall_maxillary_chronic_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.01e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.23e-19 | 9 |
upper respiratory tract | 3.87e-10 | 19 |
endoderm-derived structure | 6.00e-09 | 160 |
endoderm | 6.00e-09 | 160 |
presumptive endoderm | 6.00e-09 | 160 |
respiratory primordium | 1.35e-08 | 38 |
endoderm of foregut | 1.35e-08 | 38 |
digestive system | 8.56e-08 | 145 |
digestive tract | 8.56e-08 | 145 |
primitive gut | 8.56e-08 | 145 |
segment of respiratory tract | 2.11e-07 | 47 |
foregut | 3.52e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.08e-32 | 143 |
cancer | 2.08e-31 | 235 |
disease of cellular proliferation | 2.19e-30 | 239 |
carcinoma | 3.27e-26 | 106 |
squamous cell carcinoma | 1.59e-12 | 14 |
organ system cancer | 1.32e-07 | 137 |
chronic leukemia | 4.98e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.