FFCP PHASE1:Hg19::chr3:12941525..12941554,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9922|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=29112|TSSclassifier=W|UniProt=|association_with_transcript=68bp_to_BC008088_5end|description=CAGE_peak_13_at_IQSEC1_5end|id=chr3:12941525..12941554,-|ontology_enrichment_celltype=CL:0002057!1.19e-10!42;CL:0000766!5.89e-10!76;CL:0000839!2.80e-09!70;CL:0000860!3.04e-09!45;CL:0000738!9.35e-09!140;CL:0002087!1.38e-08!119;CL:0002194!1.51e-08!63;CL:0000576!1.51e-08!63;CL:0000040!1.51e-08!63;CL:0000559!1.51e-08!63;CL:0002031!3.19e-08!124;CL:0002009!6.28e-08!65;CL:0002032!8.09e-08!165;CL:0000837!8.09e-08!165;CL:0000557!1.37e-07!71;CL:0000037!1.44e-07!172;CL:0000566!1.44e-07!172;CL:0000763!3.26e-07!112;CL:0000049!3.26e-07!112;CL:0000988!8.53e-07!182|ontology_enrichment_celltype_v019=CL:0000775;1.59e-22;3!CL:0000473;8.72e-11;39!CL:0000234;8.72e-11;39!CL:0000094;9.14e-09;8!CL:0000766;2.32e-08;69!CL:0002174;3.44e-08;1!CL:0000501;3.44e-08;1!CL:0000860;6.05e-08;33!CL:0002057;6.05e-08;33|ontology_enrichment_celltype_v019_2=CL:0000775,1.61e-22,3;CL:0000766,1.91e-11,72;CL:0000473,4.10e-10,48;CL:0000234,4.10e-10,48;CL:0000094,9.17e-09,8;CL:0002174,3.57e-08,1;CL:0000501,3.57e-08,1;CL:0002194,8.12e-08,59;CL:0000576,8.12e-08,59;CL:0000040,8.12e-08,59;CL:0000559,8.12e-08,59;CL:0002009,1.61e-07,61;CL:0000738,3.30e-07,136;CL:0000860,4.04e-07,42;CL:0002057,4.04e-07,42;CL:0000763,5.93e-07,108;CL:0000049,5.93e-07,108;CL:0000839,7.37e-07,66;CL:0000557,9.74e-07,67|ontology_enrichment_development_v019=UBERON:0005754;3.44e-08;1!UBERON:0004874;3.44e-08;1!CL:0002057;6.25e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000989;3.44e-08;1!UBERON:0000998;3.44e-08;1!UBERON:0008811;3.44e-08;1!UBERON:0006868;3.44e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.63e-08,1;UBERON:0008811,1.63e-08,1;UBERON:0006258,1.63e-08,1;UBERON:0005876,1.63e-08,1;UBERON:0004874,1.63e-08,1;UBERON:0000998,3.83e-08,1;UBERON:0006868,3.83e-08,1;UBERON:0002390,8.02e-08,98;UBERON:0003061,8.02e-08,98;UBERON:0002193,6.54e-07,108|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,2.53299878168311,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0.383829398097213,0.309632246632152,0,0,0,0,0.142169232487422,0,0.553995408531877,0.802177789880567,0.651032612147555,0,0,0,0.726991193897824,1.51150377475524,0.485168122375632,0.232429036905685,0.411167888021826,0.929119112685311,0.28769239232215,1.5369642391746,0,1.37898272294647,0,0,1.12945403725563,0.272906150057846,0,0.306083892370903,0,0,1.31940520074686,0.797854630486527,0,0.580418477257168,0.56738522469114,0.622822248995575,1.00499466102697,1.0429658368404,0.217188844705117,0.605399502633369,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0,0,0,0,0.39783335439818,0.182664153764634,0,1.09227722252426,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,1.57204305099666,0.616804496998528,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0.260118695119756,0.164437904603676,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,0,0.144846518960824,0,1.45990461090791,0,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,1.08524321078289,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0,0.513372145118994,0,0,0,0,0,4.49404214368309,2.99161459204025,2.07207756718018,0,0.500170521059677,0,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0,0.391602314925481,0,0,0.215714200818617,0.960548020230999,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.09667071829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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29112 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=68bp_to_BC008088_5end | |||
|description=CAGE_peak_13_at_IQSEC1_5end | |||
|id=chr3:12941525..12941554,- | |||
|ontology_enrichment_celltype=CL:0002057!1.19e-10!42;CL:0000766!5.89e-10!76;CL:0000839!2.80e-09!70;CL:0000860!3.04e-09!45;CL:0000738!9.35e-09!140;CL:0002087!1.38e-08!119;CL:0002194!1.51e-08!63;CL:0000576!1.51e-08!63;CL:0000040!1.51e-08!63;CL:0000559!1.51e-08!63;CL:0002031!3.19e-08!124;CL:0002009!6.28e-08!65;CL:0002032!8.09e-08!165;CL:0000837!8.09e-08!165;CL:0000557!1.37e-07!71;CL:0000037!1.44e-07!172;CL:0000566!1.44e-07!172;CL:0000763!3.26e-07!112;CL:0000049!3.26e-07!112;CL:0000988!8.53e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.59e-22;3!CL:0000473;8.72e-11;39!CL:0000234;8.72e-11;39!CL:0000094;9.14e-09;8!CL:0000766;2.32e-08;69!CL:0002174;3.44e-08;1!CL:0000501;3.44e-08;1!CL:0000860;6.05e-08;33!CL:0002057;6.05e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.61e-22,3;CL:0000766,1.91e-11,72;CL:0000473,4.10e-10,48;CL:0000234,4.10e-10,48;CL:0000094,9.17e-09,8;CL:0002174,3.57e-08,1;CL:0000501,3.57e-08,1;CL:0002194,8.12e-08,59;CL:0000576,8.12e-08,59;CL:0000040,8.12e-08,59;CL:0000559,8.12e-08,59;CL:0002009,1.61e-07,61;CL:0000738,3.30e-07,136;CL:0000860,4.04e-07,42;CL:0002057,4.04e-07,42;CL:0000763,5.93e-07,108;CL:0000049,5.93e-07,108;CL:0000839,7.37e-07,66;CL:0000557,9.74e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.44e-08;1!UBERON:0004874;3.44e-08;1!CL:0002057;6.25e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;3.44e-08;1!UBERON:0000998;3.44e-08;1!UBERON:0008811;3.44e-08;1!UBERON:0006868;3.44e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.63e-08,1;UBERON:0008811,1.63e-08,1;UBERON:0006258,1.63e-08,1;UBERON:0005876,1.63e-08,1;UBERON:0004874,1.63e-08,1;UBERON:0000998,3.83e-08,1;UBERON:0006868,3.83e-08,1;UBERON:0002390,8.02e-08,98;UBERON:0003061,8.02e-08,98;UBERON:0002193,6.54e-07,108 | |||
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| |||
|short_description=p13@IQSEC1 | |||
}} |
Revision as of 21:30, 12 September 2013
Short description: | p13@IQSEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_IQSEC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_BC008088_5end |
EntrezGene: | IQSEC1 |
HGNC: | 29112 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.61e-22 | 3 |
myeloid leukocyte | 1.91e-11 | 72 |
defensive cell | 4.10e-10 | 48 |
phagocyte | 4.10e-10 | 48 |
granulocyte | 9.17e-09 | 8 |
follicular cell of ovary | 3.57e-08 | 1 |
granulosa cell | 3.57e-08 | 1 |
monopoietic cell | 8.12e-08 | 59 |
monocyte | 8.12e-08 | 59 |
monoblast | 8.12e-08 | 59 |
promonocyte | 8.12e-08 | 59 |
macrophage dendritic cell progenitor | 1.61e-07 | 61 |
leukocyte | 3.30e-07 | 136 |
classical monocyte | 4.04e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.04e-07 | 42 |
myeloid cell | 5.93e-07 | 108 |
common myeloid progenitor | 5.93e-07 | 108 |
myeloid lineage restricted progenitor cell | 7.37e-07 | 66 |
granulocyte monocyte progenitor cell | 9.74e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
penis | 1.63e-08 | 1 |
intromittent organ | 1.63e-08 | 1 |
lateral plate mesenchyme | 1.63e-08 | 1 |
undifferentiated genital tubercle | 1.63e-08 | 1 |
somatopleure | 1.63e-08 | 1 |
seminal vesicle | 3.83e-08 | 1 |
seminal fluid secreting gland | 3.83e-08 | 1 |
hematopoietic system | 8.02e-08 | 98 |
blood island | 8.02e-08 | 98 |
hemolymphoid system | 6.54e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.