FFCP PHASE1:Hg19::chr3:158450497..158450506,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5918|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9867|TSSclassifier=S|UniProt=P49788|association_with_transcript=-12bp_to_ENST00000237696_5end|description=CAGE_peak_7_at_RARRES1_5end|id=chr3:158450497..158450506,-|ontology_enrichment_celltype=CL:0000746!1.59e-08!3;CL:0000513!1.59e-08!3;CL:0002619!6.13e-08!3|ontology_enrichment_celltype_v019=CL:0000746;4.31e-25;3!CL:0000077;9.03e-24;19!CL:0000737;4.29e-19;4!CL:0002494;8.25e-11;16!CL:0002593;1.64e-10;2!CL:0002097;2.60e-10;2!CL:0002600;2.60e-10;2!CL:0000174;2.71e-07;3|ontology_enrichment_celltype_v019_2=CL:0000746,3.38e-25,3;CL:0000513,3.38e-25,3;CL:0000077,7.84e-24,19;CL:0000737,3.57e-19,4;CL:0000222,1.51e-11,121;CL:0002494,8.67e-11,16;CL:0002593,1.72e-10,2;CL:0002097,2.07e-10,2;CL:0002600,2.99e-10,2;CL:0000213,7.12e-08,58;CL:0000215,7.12e-08,58;CL:0000174,2.32e-07,3;CL:0000076,3.00e-07,63|ontology_enrichment_development_v019=CL:0000513;4.31e-25;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000996;2.97e-19;1!UBERON:0002456;1.64e-10;2!UBERON:0000948;5.07e-08;22!UBERON:0002369;2.71e-07;3!UBERON:0001235;2.71e-07;3!UBERON:0006858;2.71e-07;3!UBERON:0007100;4.01e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.71e-19,1;UBERON:0002456,1.72e-10,2;UBERON:0000948,2.20e-07,24;UBERON:0005498,2.20e-07,24;UBERON:0004140,2.20e-07,24;UBERON:0009881,2.20e-07,24;UBERON:0004141,2.20e-07,24;UBERON:0003084,2.20e-07,24;UBERON:0007005,2.20e-07,24;UBERON:0004139,2.20e-07,24;UBERON:0004291,2.20e-07,24;UBERON:0002369,2.32e-07,3;UBERON:0001235,2.32e-07,3;UBERON:0006858,2.32e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.639312809217652,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,1.80863626235752,0,4.1988656296464,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803701137152247,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0.636406495851874,0,0,0,0,0,0,0,0,2.19342140668156,0,0,0.282810863907425,0,0,0,0,0.578775534266688,1.31178950409327,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.480952921509202,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0.901545653983311,0.761610424337591,0,0,0.429642228169954,0.464033759878494,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0,0,1.31570429747224,0,1.15748422962549,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.134704106029175,0.430333232356058,0.332660356546013,0,0.320182037633146,0,0,0,0.122241444182866,0.406896178315738,1.33151354837103,0,0|short_description=p7@RARRES1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5918 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9867 | |||
|TSSclassifier=S | |||
|UniProt=P49788 | |||
|association_with_transcript=-12bp_to_ENST00000237696_5end | |||
|description=CAGE_peak_7_at_RARRES1_5end | |||
|id=chr3:158450497..158450506,- | |||
|ontology_enrichment_celltype=CL:0000746!1.59e-08!3;CL:0000513!1.59e-08!3;CL:0002619!6.13e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000746;4.31e-25;3!CL:0000077;9.03e-24;19!CL:0000737;4.29e-19;4!CL:0002494;8.25e-11;16!CL:0002593;1.64e-10;2!CL:0002097;2.60e-10;2!CL:0002600;2.60e-10;2!CL:0000174;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,3.38e-25,3;CL:0000513,3.38e-25,3;CL:0000077,7.84e-24,19;CL:0000737,3.57e-19,4;CL:0000222,1.51e-11,121;CL:0002494,8.67e-11,16;CL:0002593,1.72e-10,2;CL:0002097,2.07e-10,2;CL:0002600,2.99e-10,2;CL:0000213,7.12e-08,58;CL:0000215,7.12e-08,58;CL:0000174,2.32e-07,3;CL:0000076,3.00e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000513;4.31e-25;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;2.97e-19;1!UBERON:0002456;1.64e-10;2!UBERON:0000948;5.07e-08;22!UBERON:0002369;2.71e-07;3!UBERON:0001235;2.71e-07;3!UBERON:0006858;2.71e-07;3!UBERON:0007100;4.01e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.71e-19,1;UBERON:0002456,1.72e-10,2;UBERON:0000948,2.20e-07,24;UBERON:0005498,2.20e-07,24;UBERON:0004140,2.20e-07,24;UBERON:0009881,2.20e-07,24;UBERON:0004141,2.20e-07,24;UBERON:0003084,2.20e-07,24;UBERON:0007005,2.20e-07,24;UBERON:0004139,2.20e-07,24;UBERON:0004291,2.20e-07,24;UBERON:0002369,2.32e-07,3;UBERON:0001235,2.32e-07,3;UBERON:0006858,2.32e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.639312809217652,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,1.80863626235752,0,4.1988656296464,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803701137152247,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0.636406495851874,0,0,0,0,0,0,0,0,2.19342140668156,0,0,0.282810863907425,0,0,0,0,0.578775534266688,1.31178950409327,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.480952921509202,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0.901545653983311,0.761610424337591,0,0,0.429642228169954,0.464033759878494,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0,0,1.31570429747224,0,1.15748422962549,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.134704106029175,0.430333232356058,0.332660356546013,0,0.320182037633146,0,0,0,0.122241444182866,0.406896178315738,1.33151354837103,0,0 | |||
|short_description=p7@RARRES1 | |||
}} |
Revision as of 22:26, 12 September 2013
Short description: | p7@RARRES1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RARRES1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000237696_5end |
EntrezGene: | RARRES1 |
HGNC: | 9867 |
UniProt: | P49788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 3.38e-25 | 3 |
cardiac muscle myoblast | 3.38e-25 | 3 |
mesothelial cell | 7.84e-24 | 19 |
striated muscle cell | 3.57e-19 | 4 |
mesodermal cell | 1.51e-11 | 121 |
cardiocyte | 8.67e-11 | 16 |
smooth muscle cell of the internal thoracic artery | 1.72e-10 | 2 |
cortical cell of adrenal gland | 2.07e-10 | 2 |
smooth muscle cell of trachea | 2.99e-10 | 2 |
lining cell | 7.12e-08 | 58 |
barrier cell | 7.12e-08 | 58 |
steroid hormone secreting cell | 2.32e-07 | 3 |
squamous epithelial cell | 3.00e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
vagina | 2.71e-19 | 1 |
internal thoracic artery | 1.72e-10 | 2 |
heart | 2.20e-07 | 24 |
primitive heart tube | 2.20e-07 | 24 |
primary heart field | 2.20e-07 | 24 |
anterior lateral plate mesoderm | 2.20e-07 | 24 |
heart tube | 2.20e-07 | 24 |
heart primordium | 2.20e-07 | 24 |
cardiac mesoderm | 2.20e-07 | 24 |
cardiogenic plate | 2.20e-07 | 24 |
heart rudiment | 2.20e-07 | 24 |
adrenal gland | 2.32e-07 | 3 |
adrenal cortex | 2.32e-07 | 3 |
adrenal/interrenal gland | 2.32e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.