FFCP PHASE1:Hg19::chr3:187455529..187455544,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=604|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1001|TSSclassifier=S|UniProt=C9JL16|association_with_transcript=187bp_to_ENST00000438077_5end|coexpression_cluster_id=C7|description=CAGE_peak_5_at_BCL6_5end|id=chr3:187455529..187455544,-|ontology_enrichment_celltype=CL:0002009!1.67e-12!65;CL:0002057!4.28e-12!42;CL:0000557!1.94e-11!71;CL:0002194!3.12e-11!63;CL:0000576!3.12e-11!63;CL:0000040!3.12e-11!63;CL:0000559!3.12e-11!63;CL:0000860!1.05e-10!45;CL:0000839!5.93e-10!70;CL:0000766!2.32e-08!76|ontology_enrichment_celltype_v019=CL:0000860;2.75e-34;33!CL:0002057;2.75e-34;33!CL:0000473;8.32e-25;39!CL:0000234;8.32e-25;39!CL:0000576;8.80e-17;48!CL:0000766;4.72e-10;69|ontology_enrichment_celltype_v019_2=CL:0000860,7.34e-29,42;CL:0002057,7.34e-29,42;CL:0000473,1.84e-27,48;CL:0000234,1.84e-27,48;CL:0002009,1.43e-24,61;CL:0000557,4.28e-24,67;CL:0002194,3.63e-23,59;CL:0000576,3.63e-23,59;CL:0000040,3.63e-23,59;CL:0000559,3.63e-23,59;CL:0000839,2.69e-22,66;CL:0000766,5.33e-20,72;CL:0000763,7.52e-13,108;CL:0000049,7.52e-13,108;CL:0002031,3.49e-12,120;CL:0002087,1.47e-10,115;CL:0000738,4.33e-10,136;CL:0000988,5.46e-09,177;CL:0002032,1.12e-07,161;CL:0000837,1.12e-07,161;CL:0000037,3.89e-07,168|ontology_enrichment_development_v019=CL:0002057;2.59e-20;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.51e-20!115;UBERON:0002371!6.64e-09!80;UBERON:0002405!1.90e-08!115;UBERON:0002193!2.31e-08!112;UBERON:0002390!3.86e-08!102;UBERON:0003061!3.86e-08!102;UBERON:0001474!1.47e-07!86;UBERON:0000467!2.84e-07!625;UBERON:0004765!2.97e-07!101;UBERON:0001434!2.97e-07!101;UBERON:0000480!3.42e-07!626;UBERON:0001049!3.96e-07!57;UBERON:0005068!3.96e-07!57;UBERON:0006241!3.96e-07!57;UBERON:0007135!3.96e-07!57;UBERON:0003075!9.88e-07!86;UBERON:0007284!9.88e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-20,76;UBERON:0002390,1.10e-19,98;UBERON:0003061,1.10e-19,98;UBERON:0001474,1.13e-18,82;UBERON:0002193,2.82e-17,108;UBERON:0004765,1.60e-16,90;UBERON:0002405,8.25e-16,93;UBERON:0001434,2.57e-14,100;UBERON:0003081,2.13e-09,203;UBERON:0002204,5.22e-08,167|phase1_expression=0,0.642301571672949,0,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0.822335776043652,1.23882548358041,11.7953880852082,8.70946402198942,9.22280696565482,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0,0,1.53041946185451,1.92557416245656,0.639337125799041,20.7806319117631,10.9705011691898,20.4587880255693,3.48251086354301,6.80862269629368,13.7020894779026,5.52747063564835,8.34372669472322,9.99068685643537,4.84319602106695,4.78760926783834,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0.370784442784429,0.324547393654683,1.21890816109487,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.193260853163297,1.09098448236334,0.573609190778008,0,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,3.9313088667105,4.13552934676983,0,0,0,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0.984868024349589,0,0.743155811443641,0.93733833986777,0.16798212819886,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,1.14853107599234,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.330569830721956,0.384380134730212,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0.422008249231538,0,1.31843099381408,0,0.796991953004279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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=604 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1001 | |||
|TSSclassifier=S | |||
|UniProt=C9JL16 | |||
|association_with_transcript=187bp_to_ENST00000438077_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_5_at_BCL6_5end | |||
|id=chr3:187455529..187455544,- | |||
|ontology_enrichment_celltype=CL:0002009!1.67e-12!65;CL:0002057!4.28e-12!42;CL:0000557!1.94e-11!71;CL:0002194!3.12e-11!63;CL:0000576!3.12e-11!63;CL:0000040!3.12e-11!63;CL:0000559!3.12e-11!63;CL:0000860!1.05e-10!45;CL:0000839!5.93e-10!70;CL:0000766!2.32e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.75e-34;33!CL:0002057;2.75e-34;33!CL:0000473;8.32e-25;39!CL:0000234;8.32e-25;39!CL:0000576;8.80e-17;48!CL:0000766;4.72e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.34e-29,42;CL:0002057,7.34e-29,42;CL:0000473,1.84e-27,48;CL:0000234,1.84e-27,48;CL:0002009,1.43e-24,61;CL:0000557,4.28e-24,67;CL:0002194,3.63e-23,59;CL:0000576,3.63e-23,59;CL:0000040,3.63e-23,59;CL:0000559,3.63e-23,59;CL:0000839,2.69e-22,66;CL:0000766,5.33e-20,72;CL:0000763,7.52e-13,108;CL:0000049,7.52e-13,108;CL:0002031,3.49e-12,120;CL:0002087,1.47e-10,115;CL:0000738,4.33e-10,136;CL:0000988,5.46e-09,177;CL:0002032,1.12e-07,161;CL:0000837,1.12e-07,161;CL:0000037,3.89e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.51e-20!115;UBERON:0002371!6.64e-09!80;UBERON:0002405!1.90e-08!115;UBERON:0002193!2.31e-08!112;UBERON:0002390!3.86e-08!102;UBERON:0003061!3.86e-08!102;UBERON:0001474!1.47e-07!86;UBERON:0000467!2.84e-07!625;UBERON:0004765!2.97e-07!101;UBERON:0001434!2.97e-07!101;UBERON:0000480!3.42e-07!626;UBERON:0001049!3.96e-07!57;UBERON:0005068!3.96e-07!57;UBERON:0006241!3.96e-07!57;UBERON:0007135!3.96e-07!57;UBERON:0003075!9.88e-07!86;UBERON:0007284!9.88e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-20,76;UBERON:0002390,1.10e-19,98;UBERON:0003061,1.10e-19,98;UBERON:0001474,1.13e-18,82;UBERON:0002193,2.82e-17,108;UBERON:0004765,1.60e-16,90;UBERON:0002405,8.25e-16,93;UBERON:0001434,2.57e-14,100;UBERON:0003081,2.13e-09,203;UBERON:0002204,5.22e-08,167 | |||
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| |||
|short_description=p5@BCL6 | |||
}} |
Revision as of 23:12, 12 September 2013
Short description: | p5@BCL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_BCL6_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 187bp_to_ENST00000438077_5end |
EntrezGene: | BCL6 |
HGNC: | 1001 |
UniProt: | C9JL16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.34e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.34e-29 | 42 |
defensive cell | 1.84e-27 | 48 |
phagocyte | 1.84e-27 | 48 |
macrophage dendritic cell progenitor | 1.43e-24 | 61 |
granulocyte monocyte progenitor cell | 4.28e-24 | 67 |
monopoietic cell | 3.63e-23 | 59 |
monocyte | 3.63e-23 | 59 |
monoblast | 3.63e-23 | 59 |
promonocyte | 3.63e-23 | 59 |
myeloid lineage restricted progenitor cell | 2.69e-22 | 66 |
myeloid leukocyte | 5.33e-20 | 72 |
myeloid cell | 7.52e-13 | 108 |
common myeloid progenitor | 7.52e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 3.49e-12 | 120 |
nongranular leukocyte | 1.47e-10 | 115 |
leukocyte | 4.33e-10 | 136 |
hematopoietic cell | 5.46e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.12e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-07 | 161 |
hematopoietic stem cell | 3.89e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-20 | 76 |
hematopoietic system | 1.10e-19 | 98 |
blood island | 1.10e-19 | 98 |
bone element | 1.13e-18 | 82 |
hemolymphoid system | 2.82e-17 | 108 |
skeletal element | 1.60e-16 | 90 |
immune system | 8.25e-16 | 93 |
skeletal system | 2.57e-14 | 100 |
lateral plate mesoderm | 2.13e-09 | 203 |
musculoskeletal system | 5.22e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.