FFCP PHASE1:Hg19::chr6:44144336..44144350,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11131|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1478|TSSclassifier=S|UniProt=|association_with_transcript=-2bp_to_ENST00000533604_5end|coexpression_cluster_id=C100|description=CAGE_peak_2_at_CAPN11_5end|id=chr6:44144336..44144350,+|ontology_enrichment_celltype=CL:0000115!1.03e-19!35;CL:0002139!3.27e-17!24;CL:0000071!1.09e-15!18;CL:0002546!1.09e-15!18;CL:0002078!2.28e-14!44;CL:1000413!2.68e-13!9;CL:0000213!6.25e-12!57;CL:0000215!6.25e-12!57;CL:0002544!1.80e-08!6;CL:0002543!6.09e-08!6|ontology_enrichment_celltype_v019=CL:0002262;2.73e-20;2!CL:1000398;2.73e-20;2!CL:0000115;3.57e-18;36!CL:0002078;2.31e-10;45!CL:0002139;8.98e-10;24!CL:0000071;1.15e-08;18!CL:0002188;1.79e-08;5!CL:0002544;2.57e-07;6!CL:0002543;3.35e-07;6!CL:0000136;4.51e-07;13|ontology_enrichment_celltype_v019_2=CL:0002262,2.05e-20,2;CL:1000398,2.05e-20,2;CL:0000115,2.63e-20,36;CL:0002078,5.24e-16,45;CL:0000213,3.80e-12,58;CL:0000215,3.80e-12,58;CL:0002139,7.95e-10,24;CL:0000071,9.31e-09,18;CL:0002546,9.31e-09,18;CL:0002188,1.18e-08,5;CL:0002544,2.02e-07,6;CL:0002543,3.05e-07,6|ontology_enrichment_development_v019=UBERON:0010227;3.94e-11;1!UBERON:0006298;9.04e-11;1!CL:0002546;1.15e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.63e-16!115;UBERON:0001986!1.09e-15!18;UBERON:0004638!1.09e-15!18;UBERON:0004852!1.09e-15!18;UBERON:0003915!2.68e-13!9;UBERON:0004700!2.68e-13!9;UBERON:0001917!2.68e-13!9;UBERON:0000487!3.47e-12!22;UBERON:0006914!2.62e-10!25;UBERON:0000055!5.56e-08!69;UBERON:0004872!2.21e-07!84;UBERON:0001638!2.57e-07!9;UBERON:0003920!2.57e-07!9;UBERON:0004582!2.57e-07!9;UBERON:0002049!5.26e-07!79;UBERON:0007798!5.26e-07!79;UBERON:0001981!5.59e-07!60;UBERON:0007500!5.59e-07!60;UBERON:0004537!5.59e-07!60;UBERON:0006965!5.59e-07!60|ontology_enrichment_uberon_v019=UBERON:0001281;2.73e-20;2!UBERON:0003497;2.73e-20;2!UBERON:0003909;2.73e-20;2!UBERON:0003835;2.73e-20;2!UBERON:0001280;7.41e-14;3!UBERON:0004647;7.41e-14;3!UBERON:0002079;3.94e-11;1!UBERON:0001736;9.04e-11;1!UBERON:0000996;9.04e-11;1!UBERON:0000353;2.11e-10;15!UBERON:0001638;5.36e-10;9!UBERON:0003920;5.36e-10;9!UBERON:0004582;5.36e-10;9!UBERON:0004638;1.15e-08;18!UBERON:0001986;1.15e-08;18!UBERON:0004852;1.15e-08;18!UBERON:0000487;4.08e-07;22!UBERON:0000055;4.08e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.05e-20,2;UBERON:0003497,2.05e-20,2;UBERON:0003909,2.05e-20,2;UBERON:0003835,2.05e-20,2;UBERON:0001280,6.12e-14,3;UBERON:0004647,6.12e-14,3;UBERON:0005171,6.12e-14,3;UBERON:0002079,4.15e-11,1;UBERON:0001736,7.46e-11,1;UBERON:0006298,7.46e-11,1;UBERON:0000996,8.22e-11,1;UBERON:0000353,1.50e-10,15;UBERON:0001638,5.89e-10,9;UBERON:0003920,5.89e-10,9;UBERON:0004582,5.89e-10,9;UBERON:0004638,9.31e-09,18;UBERON:0001986,9.31e-09,18;UBERON:0004852,9.31e-09,18;UBERON:0000058,2.31e-08,19;UBERON:0000055,5.54e-08,68;UBERON:0002394,2.09e-07,6;UBERON:0003928,2.09e-07,6;UBERON:0007500,3.12e-07,59;UBERON:0001981,3.12e-07,59;UBERON:0004537,3.12e-07,59;UBERON:0006965,3.12e-07,59;UBERON:0000487,3.44e-07,22;UBERON:0002049,7.84e-07,78;UBERON:0007798,7.84e-07,78|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.97364218096405,0.174129737299267,0.664789802594326,0,0,0,0.39752481473341,2.58070378531837,1.73570250803797,0.56530794192401,0.419499436209906,0.825354125820202,0.835979866147242,0.516833518338658,1.06729878806013,0.66944122552934,0,0,0,0.735326160691737,0,1.25019619597712,0.22452937262617,0.450445921933289,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16708818237254,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,1.70093705276516,0.647747748306418,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.340906509664404,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,3.80921266106924,0,0.3343301528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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1478 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000533604_5end | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_2_at_CAPN11_5end | |||
|id=chr6:44144336..44144350,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.03e-19!35;CL:0002139!3.27e-17!24;CL:0000071!1.09e-15!18;CL:0002546!1.09e-15!18;CL:0002078!2.28e-14!44;CL:1000413!2.68e-13!9;CL:0000213!6.25e-12!57;CL:0000215!6.25e-12!57;CL:0002544!1.80e-08!6;CL:0002543!6.09e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.73e-20;2!CL:1000398;2.73e-20;2!CL:0000115;3.57e-18;36!CL:0002078;2.31e-10;45!CL:0002139;8.98e-10;24!CL:0000071;1.15e-08;18!CL:0002188;1.79e-08;5!CL:0002544;2.57e-07;6!CL:0002543;3.35e-07;6!CL:0000136;4.51e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.05e-20,2;CL:1000398,2.05e-20,2;CL:0000115,2.63e-20,36;CL:0002078,5.24e-16,45;CL:0000213,3.80e-12,58;CL:0000215,3.80e-12,58;CL:0002139,7.95e-10,24;CL:0000071,9.31e-09,18;CL:0002546,9.31e-09,18;CL:0002188,1.18e-08,5;CL:0002544,2.02e-07,6;CL:0002543,3.05e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.94e-11;1!UBERON:0006298;9.04e-11;1!CL:0002546;1.15e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.63e-16!115;UBERON:0001986!1.09e-15!18;UBERON:0004638!1.09e-15!18;UBERON:0004852!1.09e-15!18;UBERON:0003915!2.68e-13!9;UBERON:0004700!2.68e-13!9;UBERON:0001917!2.68e-13!9;UBERON:0000487!3.47e-12!22;UBERON:0006914!2.62e-10!25;UBERON:0000055!5.56e-08!69;UBERON:0004872!2.21e-07!84;UBERON:0001638!2.57e-07!9;UBERON:0003920!2.57e-07!9;UBERON:0004582!2.57e-07!9;UBERON:0002049!5.26e-07!79;UBERON:0007798!5.26e-07!79;UBERON:0001981!5.59e-07!60;UBERON:0007500!5.59e-07!60;UBERON:0004537!5.59e-07!60;UBERON:0006965!5.59e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.73e-20;2!UBERON:0003497;2.73e-20;2!UBERON:0003909;2.73e-20;2!UBERON:0003835;2.73e-20;2!UBERON:0001280;7.41e-14;3!UBERON:0004647;7.41e-14;3!UBERON:0002079;3.94e-11;1!UBERON:0001736;9.04e-11;1!UBERON:0000996;9.04e-11;1!UBERON:0000353;2.11e-10;15!UBERON:0001638;5.36e-10;9!UBERON:0003920;5.36e-10;9!UBERON:0004582;5.36e-10;9!UBERON:0004638;1.15e-08;18!UBERON:0001986;1.15e-08;18!UBERON:0004852;1.15e-08;18!UBERON:0000487;4.08e-07;22!UBERON:0000055;4.08e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.05e-20,2;UBERON:0003497,2.05e-20,2;UBERON:0003909,2.05e-20,2;UBERON:0003835,2.05e-20,2;UBERON:0001280,6.12e-14,3;UBERON:0004647,6.12e-14,3;UBERON:0005171,6.12e-14,3;UBERON:0002079,4.15e-11,1;UBERON:0001736,7.46e-11,1;UBERON:0006298,7.46e-11,1;UBERON:0000996,8.22e-11,1;UBERON:0000353,1.50e-10,15;UBERON:0001638,5.89e-10,9;UBERON:0003920,5.89e-10,9;UBERON:0004582,5.89e-10,9;UBERON:0004638,9.31e-09,18;UBERON:0001986,9.31e-09,18;UBERON:0004852,9.31e-09,18;UBERON:0000058,2.31e-08,19;UBERON:0000055,5.54e-08,68;UBERON:0002394,2.09e-07,6;UBERON:0003928,2.09e-07,6;UBERON:0007500,3.12e-07,59;UBERON:0001981,3.12e-07,59;UBERON:0004537,3.12e-07,59;UBERON:0006965,3.12e-07,59;UBERON:0000487,3.44e-07,22;UBERON:0002049,7.84e-07,78;UBERON:0007798,7.84e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.97364218096405,0.174129737299267,0.664789802594326,0,0,0,0.39752481473341,2.58070378531837,1.73570250803797,0.56530794192401,0.419499436209906,0.825354125820202,0.835979866147242,0.516833518338658,1.06729878806013,0.66944122552934,0,0,0,0.735326160691737,0,1.25019619597712,0.22452937262617,0.450445921933289,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16708818237254,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,1.70093705276516,0.647747748306418,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.340906509664404,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,3.80921266106924,0,0.334330152832435,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,1.2558420511602,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.884612114798832,0,0,0,0,0,0,0,3.88289084436788,0,0,0,0.873633341210151,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,1.08803560673895,1.0027595760908,1.22538230705385,0.983617892129413,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.313972371402056,0,0,0,0.863710364874486,0,0,0,59.5156097884801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,1.37618785021362,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.267964130156178,0,0,1.0661699095049,0.476128862927481,0,0.124149428591716,0,0,0,0.870866991587845,0.342233301085281,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0.733448665097199,0,1.33151354837103,1.00636896795513,0 | |||
|short_description=p2@CAPN11 | |||
}} |
Revision as of 21:09, 13 September 2013
Short description: | p2@CAPN11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CAPN11_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | -2bp_to_ENST00000533604_5end |
EntrezGene: | CAPN11 |
HGNC: | 1478 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.05e-20 | 2 |
endothelial cell of hepatic sinusoid | 2.05e-20 | 2 |
endothelial cell | 2.63e-20 | 36 |
meso-epithelial cell | 5.24e-16 | 45 |
lining cell | 3.80e-12 | 58 |
barrier cell | 3.80e-12 | 58 |
endothelial cell of vascular tree | 7.95e-10 | 24 |
blood vessel endothelial cell | 9.31e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.31e-09 | 18 |
glomerular endothelial cell | 1.18e-08 | 5 |
aortic endothelial cell | 2.02e-07 | 6 |
vein endothelial cell | 3.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.05e-20 | 2 |
abdomen blood vessel | 2.05e-20 | 2 |
sinusoid | 2.05e-20 | 2 |
abdominal segment blood vessel | 2.05e-20 | 2 |
liver parenchyma | 6.12e-14 | 3 |
liver lobule | 6.12e-14 | 3 |
hepatic duct | 6.12e-14 | 3 |
left cardiac atrium | 4.15e-11 | 1 |
submandibular gland | 7.46e-11 | 1 |
submandibular gland primordium | 7.46e-11 | 1 |
vagina | 8.22e-11 | 1 |
parenchyma | 1.50e-10 | 15 |
vein | 5.89e-10 | 9 |
venous blood vessel | 5.89e-10 | 9 |
venous system | 5.89e-10 | 9 |
blood vessel endothelium | 9.31e-09 | 18 |
endothelium | 9.31e-09 | 18 |
cardiovascular system endothelium | 9.31e-09 | 18 |
duct | 2.31e-08 | 19 |
vessel | 5.54e-08 | 68 |
bile duct | 2.09e-07 | 6 |
digestive system duct | 2.09e-07 | 6 |
epithelial tube open at both ends | 3.12e-07 | 59 |
blood vessel | 3.12e-07 | 59 |
blood vasculature | 3.12e-07 | 59 |
vascular cord | 3.12e-07 | 59 |
simple squamous epithelium | 3.44e-07 | 22 |
vasculature | 7.84e-07 | 78 |
vascular system | 7.84e-07 | 78 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.