FFCP PHASE1:Hg19::chr6:132455044..132455047,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1413|description=CAGE_peak_at_chr6:132455044..132455047,-|id=chr6:132455044..132455047,-|ontology_enrichment_celltype=CL:0000071!9.65e-29!18;CL:0002546!9.65e-29!18;CL:1000413!4.10e-25!9;CL:0002139!5.78e-25!24;CL:0002544!6.12e-20!6;CL:0000115!2.60e-16!35;CL:0002618!1.42e-13!3;CL:0002078!1.86e-12!44;CL:0002543!8.25e-12!6;CL:0001014!6.53e-11!2;CL:0001016!6.53e-11!2;CL:0002545!1.46e-10!2;CL:0002274!2.66e-09!5;CL:0000457!2.66e-09!5;CL:0002191!2.66e-09!5;CL:0000097!2.66e-09!5;CL:0000831!2.66e-09!5;CL:0002028!2.66e-09!5;CL:0000213!4.71e-09!57;CL:0000215!4.71e-09!57;CL:0000076!3.72e-08!62;CL:0000236!4.61e-08!14|ontology_enrichment_celltype_v019=CL:0001014;2.55e-45;2!CL:0001016;2.55e-45;2!CL:1000413;4.82e-39;9!CL:0002544;2.42e-33;6!CL:0000071;8.12e-20;18!CL:0000453;7.92e-19;5!CL:0000097;9.90e-19;5!CL:0000840;7.23e-16;5!CL:0002139;5.50e-15;24!CL:0002545;3.06e-12;2!CL:0000990;6.54e-11;8!CL:0000163;7.40e-11;9!CL:0000115;1.22e-09;36!CL:0000451;4.25e-09;10!CL:0002078;3.69e-07;45|ontology_enrichment_celltype_v019_2=CL:0001014,2.55e-45,2;CL:0001016,2.55e-45,2;CL:1000413,5.32e-39,9;CL:0002544,2.86e-33,6;CL:0000071,8.53e-20,18;CL:0002546,8.53e-20,18;CL:0000453,7.92e-19,5;CL:0000097,1.04e-18,5;CL:0002028,1.04e-18,5;CL:0000840,7.23e-16,5;CL:0001029,7.23e-16,5;CL:0002139,5.71e-15,24;CL:0002545,3.62e-12,2;CL:0000990,6.54e-11,8;CL:0000163,7.58e-11,9;CL:0000115,4.04e-10,36;CL:0000451,4.25e-09,10;CL:0002078,3.63e-08,45|ontology_enrichment_development_v019=CL:0002546;8.12e-20;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!9.65e-29!18;UBERON:0004638!9.65e-29!18;UBERON:0004852!9.65e-29!18;UBERON:0003915!4.10e-25!9;UBERON:0004700!4.10e-25!9;UBERON:0001917!4.10e-25!9;UBERON:0000487!4.21e-23!22;UBERON:0006914!4.67e-20!25;UBERON:0002049!1.18e-12!79;UBERON:0007798!1.18e-12!79;UBERON:0001981!7.70e-12!60;UBERON:0007500!7.70e-12!60;UBERON:0004537!7.70e-12!60;UBERON:0006965!7.70e-12!60;UBERON:0000055!1.75e-11!69;UBERON:0005800!1.46e-10!2;UBERON:0001515!1.46e-10!2;UBERON:0000947!4.58e-10!21;UBERON:0010191!4.58e-10!21;UBERON:0001637!3.08e-09!42;UBERON:0003509!3.08e-09!42;UBERON:0004572!3.08e-09!42;UBERON:0002066!2.44e-08!5;UBERON:0004535!4.89e-08!110;UBERON:0001638!6.61e-08!9;UBERON:0003920!6.61e-08!9;UBERON:0004582!6.61e-08!9;UBERON:0001009!9.96e-08!113;UBERON:0004872!1.31e-07!84|ontology_enrichment_uberon_v019=UBERON:0003915;4.82e-39;9!UBERON:0004700;4.82e-39;9!UBERON:0001917;4.82e-39;9!UBERON:0004638;8.12e-20;18!UBERON:0001986;8.12e-20;18!UBERON:0004852;8.12e-20;18!UBERON:0000487;2.64e-16;22!UBERON:0006914;2.10e-14;25!UBERON:0005800;3.06e-12;2!UBERON:0001515;3.06e-12;2!UBERON:0000490;1.28e-10;33!UBERON:0000947;4.65e-10;21!UBERON:0010191;4.65e-10;21!UBERON:0001637;1.29e-08;42!UBERON:0003509;1.29e-08;42!UBERON:0004572;1.29e-08;42!UBERON:0004573;7.04e-07;33!UBERON:0004571;7.04e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0003915,5.32e-39,9;UBERON:0004700,5.32e-39,9;UBERON:0001917,5.32e-39,9;UBERON:0004638,8.53e-20,18;UBERON:0001986,8.53e-20,18;UBERON:0004852,8.53e-20,18;UBERON:0000487,2.74e-16,22;UBERON:0006914,2.17e-14,25;UBERON:0005800,3.62e-12,2;UBERON:0001515,3.62e-12,2;UBERON:0000947,4.88e-10,21;UBERON:0010191,4.88e-10,21;UBERON:0001637,1.00e-08,42;UBERON:0003509,1.00e-08,42;UBERON:0004572,1.00e-08,42|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,1.70763890732835,0,0.382273228125229,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0.993812036833525,0,1.38856200643038,2.82653970962005,1.67799774483962,0,0.417989933073621,0,0,0,0,0,0,1.10298924103761,0.81014194788176,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0,0.515281080091258,0,0.168776332241266,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28060927094849,3.31475892859011,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1413 | |||
|description=CAGE_peak_at_chr6:132455044..132455047,- | |||
|id=chr6:132455044..132455047,- | |||
|ontology_enrichment_celltype=CL:0000071!9.65e-29!18;CL:0002546!9.65e-29!18;CL:1000413!4.10e-25!9;CL:0002139!5.78e-25!24;CL:0002544!6.12e-20!6;CL:0000115!2.60e-16!35;CL:0002618!1.42e-13!3;CL:0002078!1.86e-12!44;CL:0002543!8.25e-12!6;CL:0001014!6.53e-11!2;CL:0001016!6.53e-11!2;CL:0002545!1.46e-10!2;CL:0002274!2.66e-09!5;CL:0000457!2.66e-09!5;CL:0002191!2.66e-09!5;CL:0000097!2.66e-09!5;CL:0000831!2.66e-09!5;CL:0002028!2.66e-09!5;CL:0000213!4.71e-09!57;CL:0000215!4.71e-09!57;CL:0000076!3.72e-08!62;CL:0000236!4.61e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.55e-45;2!CL:0001016;2.55e-45;2!CL:1000413;4.82e-39;9!CL:0002544;2.42e-33;6!CL:0000071;8.12e-20;18!CL:0000453;7.92e-19;5!CL:0000097;9.90e-19;5!CL:0000840;7.23e-16;5!CL:0002139;5.50e-15;24!CL:0002545;3.06e-12;2!CL:0000990;6.54e-11;8!CL:0000163;7.40e-11;9!CL:0000115;1.22e-09;36!CL:0000451;4.25e-09;10!CL:0002078;3.69e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.55e-45,2;CL:0001016,2.55e-45,2;CL:1000413,5.32e-39,9;CL:0002544,2.86e-33,6;CL:0000071,8.53e-20,18;CL:0002546,8.53e-20,18;CL:0000453,7.92e-19,5;CL:0000097,1.04e-18,5;CL:0002028,1.04e-18,5;CL:0000840,7.23e-16,5;CL:0001029,7.23e-16,5;CL:0002139,5.71e-15,24;CL:0002545,3.62e-12,2;CL:0000990,6.54e-11,8;CL:0000163,7.58e-11,9;CL:0000115,4.04e-10,36;CL:0000451,4.25e-09,10;CL:0002078,3.63e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;8.12e-20;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!9.65e-29!18;UBERON:0004638!9.65e-29!18;UBERON:0004852!9.65e-29!18;UBERON:0003915!4.10e-25!9;UBERON:0004700!4.10e-25!9;UBERON:0001917!4.10e-25!9;UBERON:0000487!4.21e-23!22;UBERON:0006914!4.67e-20!25;UBERON:0002049!1.18e-12!79;UBERON:0007798!1.18e-12!79;UBERON:0001981!7.70e-12!60;UBERON:0007500!7.70e-12!60;UBERON:0004537!7.70e-12!60;UBERON:0006965!7.70e-12!60;UBERON:0000055!1.75e-11!69;UBERON:0005800!1.46e-10!2;UBERON:0001515!1.46e-10!2;UBERON:0000947!4.58e-10!21;UBERON:0010191!4.58e-10!21;UBERON:0001637!3.08e-09!42;UBERON:0003509!3.08e-09!42;UBERON:0004572!3.08e-09!42;UBERON:0002066!2.44e-08!5;UBERON:0004535!4.89e-08!110;UBERON:0001638!6.61e-08!9;UBERON:0003920!6.61e-08!9;UBERON:0004582!6.61e-08!9;UBERON:0001009!9.96e-08!113;UBERON:0004872!1.31e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;4.82e-39;9!UBERON:0004700;4.82e-39;9!UBERON:0001917;4.82e-39;9!UBERON:0004638;8.12e-20;18!UBERON:0001986;8.12e-20;18!UBERON:0004852;8.12e-20;18!UBERON:0000487;2.64e-16;22!UBERON:0006914;2.10e-14;25!UBERON:0005800;3.06e-12;2!UBERON:0001515;3.06e-12;2!UBERON:0000490;1.28e-10;33!UBERON:0000947;4.65e-10;21!UBERON:0010191;4.65e-10;21!UBERON:0001637;1.29e-08;42!UBERON:0003509;1.29e-08;42!UBERON:0004572;1.29e-08;42!UBERON:0004573;7.04e-07;33!UBERON:0004571;7.04e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,5.32e-39,9;UBERON:0004700,5.32e-39,9;UBERON:0001917,5.32e-39,9;UBERON:0004638,8.53e-20,18;UBERON:0001986,8.53e-20,18;UBERON:0004852,8.53e-20,18;UBERON:0000487,2.74e-16,22;UBERON:0006914,2.17e-14,25;UBERON:0005800,3.62e-12,2;UBERON:0001515,3.62e-12,2;UBERON:0000947,4.88e-10,21;UBERON:0010191,4.88e-10,21;UBERON:0001637,1.00e-08,42;UBERON:0003509,1.00e-08,42;UBERON:0004572,1.00e-08,42 | |||
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|short_description=p@chr6:132455044..132455047,- | |||
}} |
Revision as of 18:00, 13 September 2013
Short description: | p@chr6:132455044..132455047, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:132455044..132455047, - |
Coexpression cluster: | C1413_Mast_immature_CD14_Dendritic_Basophils_CD8_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.55e-45 | 2 |
immature CD1a-positive Langerhans cell | 2.55e-45 | 2 |
endothelial cell of artery | 5.32e-39 | 9 |
aortic endothelial cell | 2.86e-33 | 6 |
blood vessel endothelial cell | 8.53e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.53e-20 | 18 |
Langerhans cell | 7.92e-19 | 5 |
mast cell | 1.04e-18 | 5 |
basophil mast progenitor cell | 1.04e-18 | 5 |
immature conventional dendritic cell | 7.23e-16 | 5 |
common dendritic progenitor | 7.23e-16 | 5 |
endothelial cell of vascular tree | 5.71e-15 | 24 |
thoracic aorta endothelial cell | 3.62e-12 | 2 |
conventional dendritic cell | 6.54e-11 | 8 |
endocrine cell | 7.58e-11 | 9 |
endothelial cell | 4.04e-10 | 36 |
dendritic cell | 4.25e-09 | 10 |
meso-epithelial cell | 3.63e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 5.32e-39 | 9 |
arterial system endothelium | 5.32e-39 | 9 |
endothelium of artery | 5.32e-39 | 9 |
blood vessel endothelium | 8.53e-20 | 18 |
endothelium | 8.53e-20 | 18 |
cardiovascular system endothelium | 8.53e-20 | 18 |
simple squamous epithelium | 2.74e-16 | 22 |
squamous epithelium | 2.17e-14 | 25 |
segment of aorta | 3.62e-12 | 2 |
thoracic aorta | 3.62e-12 | 2 |
aorta | 4.88e-10 | 21 |
aortic system | 4.88e-10 | 21 |
artery | 1.00e-08 | 42 |
arterial blood vessel | 1.00e-08 | 42 |
arterial system | 1.00e-08 | 42 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.