FFCP PHASE1:Hg19::chr7:150217466..150217485,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=168537|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=22404|TSSclassifier=N|UniProt=|association_with_transcript=404bp_to_AB464559,CU693278,DQ890939,EU176534_5end|coexpression_cluster_id=C2884|description=CAGE_peak_2_at_GIMAP7_5end|id=chr7:150217466..150217485,+|ontology_enrichment_celltype=CL:0000791!1.55e-19!18;CL:0000789!1.55e-19!18;CL:0002420!1.55e-19!18;CL:0002419!1.55e-19!18;CL:0000790!1.55e-19!18;CL:0002087!2.35e-18!119;CL:0000084!2.87e-15!25;CL:0000827!2.87e-15!25;CL:0002031!1.83e-14!124;CL:0000738!1.45e-13!140;CL:0000625!4.24e-13!11;CL:0002057!2.05e-11!42;CL:0000860!3.94e-10!45;CL:0002194!6.04e-10!63;CL:0000576!6.04e-10!63;CL:0000040!6.04e-10!63;CL:0000559!6.04e-10!63;CL:0000037!6.52e-10!172;CL:0000566!6.52e-10!172;CL:0002032!2.23e-09!165;CL:0000837!2.23e-09!165;CL:0002009!2.32e-09!65;CL:0000988!6.30e-09!182;CL:0000839!4.59e-08!70;CL:0000557!7.86e-08!71;CL:0000838!1.02e-07!52;CL:0000624!1.46e-07!6;CL:0000542!1.94e-07!53;CL:0000051!1.94e-07!53;CL:0000766!2.26e-07!76;CL:0002139!4.26e-07!24;CL:0000115!6.09e-07!35|ontology_enrichment_celltype_v019=CL:0000791;3.31e-29;18!CL:0000789;3.31e-29;18!CL:0002419;3.31e-29;18!CL:0000084;4.20e-23;25!CL:0000625;1.38e-20;11!CL:0000624;3.69e-12;6!CL:0000898;4.19e-09;3|ontology_enrichment_celltype_v019_2=CL:0000791,3.07e-29,18;CL:0000789,3.07e-29,18;CL:0002420,3.07e-29,18;CL:0002419,3.07e-29,18;CL:0000790,3.07e-29,18;CL:0000084,4.64e-23,25;CL:0000827,4.64e-23,25;CL:0000625,9.54e-21,11;CL:0000838,2.72e-12,52;CL:0000624,4.96e-12,6;CL:0000542,5.55e-12,53;CL:0000051,5.55e-12,53;CL:0002087,1.49e-10,115;CL:0000898,6.12e-09,3;CL:0002031,6.18e-09,120;CL:0000738,5.29e-08,136|ontology_enrichment_development_v019=CL:0000790;3.31e-29;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.62e-32!115;UBERON:0002193!5.37e-16!112;UBERON:0002390!9.32e-13!102;UBERON:0003061!9.32e-13!102;UBERON:0000178!4.57e-09!15;UBERON:0000179!4.57e-09!15;UBERON:0000463!4.57e-09!15;UBERON:0002405!1.58e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;6.60e-16;15!UBERON:0000179;6.60e-16;15!UBERON:0000463;6.60e-16;15!UBERON:0002193;1.61e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.91e-16,15;UBERON:0000179,4.91e-16,15;UBERON:0000463,4.91e-16,15;UBERON:0002193,3.91e-08,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.601633342410425,1.30206522429511,0.671746422719773,0.32389366601898,1.28787783817093,1.74477886535478,0.377875943688809,1.4555043671269,0,0.411167888021826,0,0.575384784644301,0.512321413058201,0,0,0,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0,0,3.95821560224059,0.797854630486527,5.54092175692502,0.580418477257168,0.56738522469114,0,0.75374599577023,1.0429658368404,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,0.150176892841506,0.48217676009124,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,2.35806457649499,2.87842098599313,0.334372990781356,1.30368906653436,1.4203434172042,0,1.78256731016278,1.17842362989935,1.10766947291811,1.89562704635511,5.25174410875268,2.47112760363769,11.8395291314647,5.80335037350282,2.60822777161547,3.11401782640327,2.67540828089713,3.1360657141493,2.94604291013672,1.14966148080576,1.03088233644789,3.54227568827304,1.91139248594458,4.55758417699493,1.90090408889675,0.903450714466637,3.07167866770604,1.24930726552346,1.18388626022008,2.46338399076314,0.403213486449465,1.60464117470104,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,1.04142150482278,0.56530794192401,0,1.10047216776027,0.208994966536811,0.516833518338658,0.35576626268671,1.33888245105868,0,0,1.22031028774085,0.367663080345869,0,0.892997282840798,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85194205030644,5.13686211033415,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0.591092280605782,1.94064817373566,2.69520376187472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,3.23873874153209,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,3.82318603571188,3.41788312304498,3.57347663186684,2.87953591160336,3.24236655596359,7.02040868409549,3.96562588147135,0,0,0,0,0,0.142283686696828,1.11598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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=168537 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=22404 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=404bp_to_AB464559,CU693278,DQ890939,EU176534_5end | |||
|coexpression_cluster_id=C2884 | |||
|description=CAGE_peak_2_at_GIMAP7_5end | |||
|id=chr7:150217466..150217485,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.55e-19!18;CL:0000789!1.55e-19!18;CL:0002420!1.55e-19!18;CL:0002419!1.55e-19!18;CL:0000790!1.55e-19!18;CL:0002087!2.35e-18!119;CL:0000084!2.87e-15!25;CL:0000827!2.87e-15!25;CL:0002031!1.83e-14!124;CL:0000738!1.45e-13!140;CL:0000625!4.24e-13!11;CL:0002057!2.05e-11!42;CL:0000860!3.94e-10!45;CL:0002194!6.04e-10!63;CL:0000576!6.04e-10!63;CL:0000040!6.04e-10!63;CL:0000559!6.04e-10!63;CL:0000037!6.52e-10!172;CL:0000566!6.52e-10!172;CL:0002032!2.23e-09!165;CL:0000837!2.23e-09!165;CL:0002009!2.32e-09!65;CL:0000988!6.30e-09!182;CL:0000839!4.59e-08!70;CL:0000557!7.86e-08!71;CL:0000838!1.02e-07!52;CL:0000624!1.46e-07!6;CL:0000542!1.94e-07!53;CL:0000051!1.94e-07!53;CL:0000766!2.26e-07!76;CL:0002139!4.26e-07!24;CL:0000115!6.09e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.31e-29;18!CL:0000789;3.31e-29;18!CL:0002419;3.31e-29;18!CL:0000084;4.20e-23;25!CL:0000625;1.38e-20;11!CL:0000624;3.69e-12;6!CL:0000898;4.19e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.07e-29,18;CL:0000789,3.07e-29,18;CL:0002420,3.07e-29,18;CL:0002419,3.07e-29,18;CL:0000790,3.07e-29,18;CL:0000084,4.64e-23,25;CL:0000827,4.64e-23,25;CL:0000625,9.54e-21,11;CL:0000838,2.72e-12,52;CL:0000624,4.96e-12,6;CL:0000542,5.55e-12,53;CL:0000051,5.55e-12,53;CL:0002087,1.49e-10,115;CL:0000898,6.12e-09,3;CL:0002031,6.18e-09,120;CL:0000738,5.29e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.31e-29;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.62e-32!115;UBERON:0002193!5.37e-16!112;UBERON:0002390!9.32e-13!102;UBERON:0003061!9.32e-13!102;UBERON:0000178!4.57e-09!15;UBERON:0000179!4.57e-09!15;UBERON:0000463!4.57e-09!15;UBERON:0002405!1.58e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.60e-16;15!UBERON:0000179;6.60e-16;15!UBERON:0000463;6.60e-16;15!UBERON:0002193;1.61e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.91e-16,15;UBERON:0000179,4.91e-16,15;UBERON:0000463,4.91e-16,15;UBERON:0002193,3.91e-08,108 | |||
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|short_description=p2@GIMAP7 | |||
}} |
Revision as of 23:55, 13 September 2013
Short description: | p2@GIMAP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GIMAP7_5end |
Coexpression cluster: | C2884_CD4_CD14_lymph_Lymphatic_Whole_CD8_lung |
Association with transcript: | 404bp_to_AB464559, CU693278, DQ890939, EU176534_5end |
EntrezGene: | GIMAP7 |
HGNC: | 22404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.07e-29 | 18 |
alpha-beta T cell | 3.07e-29 | 18 |
immature T cell | 3.07e-29 | 18 |
mature T cell | 3.07e-29 | 18 |
immature alpha-beta T cell | 3.07e-29 | 18 |
T cell | 4.64e-23 | 25 |
pro-T cell | 4.64e-23 | 25 |
CD8-positive, alpha-beta T cell | 9.54e-21 | 11 |
lymphoid lineage restricted progenitor cell | 2.72e-12 | 52 |
CD4-positive, alpha-beta T cell | 4.96e-12 | 6 |
lymphocyte | 5.55e-12 | 53 |
common lymphoid progenitor | 5.55e-12 | 53 |
nongranular leukocyte | 1.49e-10 | 115 |
naive T cell | 6.12e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 6.18e-09 | 120 |
leukocyte | 5.29e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 4.91e-16 | 15 |
haemolymphatic fluid | 4.91e-16 | 15 |
organism substance | 4.91e-16 | 15 |
hemolymphoid system | 3.91e-08 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.