FFCP PHASE1:Hg19::chr9:71347655..71347671,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C228|description=CAGE_peak_at_chr9:71347655..71347671,+|id=chr9:71347655..71347671,+|ontology_enrichment_celltype=CL:0002563!5.17e-21!4;CL:0000181!1.06e-15!12;CL:0000417!1.06e-15!12;CL:0000668!1.06e-15!12;CL:0000414!1.06e-15!12;CL:0000412!1.06e-15!12;CL:0000182!1.06e-15!12;CL:0000223!3.85e-12!59;CL:0002253!1.82e-11!2;CL:0002231!6.78e-08!3|ontology_enrichment_celltype_v019=CL:0002253;5.04e-34;2!CL:0000182;5.13e-23;12!CL:0002563;8.69e-18;4|ontology_enrichment_celltype_v019_2=CL:0002253,3.61e-34,2;CL:0000182,5.74e-23,12;CL:0002563,7.35e-18,4;CL:0000223,2.67e-11,58|ontology_enrichment_development_v019=UBERON:0004161;5.49e-25;11!UBERON:0009497;2.40e-21;13!UBERON:0003104;1.08e-19;31!UBERON:0001041;6.23e-10;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:7;5.60e-08;39|ontology_enrichment_disease_v019_2=DOID:7,7.07e-08,39|ontology_enrichment_uberon=UBERON:0001242!5.17e-21!4;UBERON:0001262!5.17e-21!4;UBERON:0004786!5.17e-21!4;UBERON:0004808!5.17e-21!4;UBERON:0001277!5.17e-21!4;UBERON:0003350!5.03e-17!5;UBERON:0003929!2.86e-13!54;UBERON:0004921!6.00e-12!129;UBERON:0004185!6.00e-12!129;UBERON:0000160!1.07e-11!27;UBERON:0005911!1.09e-11!82;UBERON:0002107!3.68e-10!19;UBERON:0006925!3.68e-10!19;UBERON:0008836!3.68e-10!19;UBERON:0000485!6.78e-10!9;UBERON:0001007!7.06e-10!155;UBERON:0001555!7.06e-10!155;UBERON:0007026!7.06e-10!155;UBERON:0001155!8.46e-10!9;UBERON:0005409!3.57e-09!35;UBERON:0004119!5.07e-09!169;UBERON:0000925!5.07e-09!169;UBERON:0006595!5.07e-09!169;UBERON:0008835!7.41e-09!22;UBERON:0003894!7.41e-09!22;UBERON:0009854!1.70e-08!23;UBERON:0000059!3.50e-08!11;UBERON:0007499!7.31e-08!25;UBERON:0009497!7.31e-08!25;UBERON:0000015!7.31e-08!25;UBERON:0002423!7.31e-08!25;UBERON:0006235!7.31e-08!25;UBERON:0004161!7.31e-08!25;UBERON:0000344!1.20e-07!12;UBERON:0000060!1.20e-07!12;UBERON:0005057!1.40e-07!26;UBERON:0009856!1.40e-07!26|ontology_enrichment_uberon_v019=UBERON:0001052;8.69e-18;4!UBERON:0001242;8.69e-18;4!UBERON:0001262;8.69e-18;4!UBERON:0004786;8.69e-18;4!UBERON:0004808;8.69e-18;4!UBERON:0001277;8.69e-18;4!UBERON:0002107;5.27e-15;19!UBERON:0006925;5.27e-15;19!UBERON:0004907;1.60e-14;5!UBERON:0002423;1.09e-11;25!UBERON:0000485;8.99e-11;7!UBERON:0003929;8.99e-11;7!UBERON:0003350;1.35e-09;8!UBERON:0002368;2.79e-09;33!UBERON:0001155;1.12e-08;9!UBERON:0002365;1.25e-08;31!UBERON:0002330;1.25e-08;31!UBERON:0000059;2.47e-07;11!UBERON:0000949;4.46e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0001052,7.35e-18,4;UBERON:0001242,7.35e-18,4;UBERON:0001262,7.35e-18,4;UBERON:0004786,7.35e-18,4;UBERON:0004808,7.35e-18,4;UBERON:0001277,7.35e-18,4;UBERON:0002107,5.66e-15,19;UBERON:0006925,5.66e-15,19;UBERON:0008836,5.66e-15,19;UBERON:0004907,1.40e-14,5;UBERON:0008835,4.26e-13,22;UBERON:0003894,4.26e-13,22;UBERON:0009854,1.41e-12,23;UBERON:0003929,4.68e-12,54;UBERON:0007499,1.15e-11,25;UBERON:0009497,1.15e-11,25;UBERON:0000015,1.15e-11,25;UBERON:0002423,1.15e-11,25;UBERON:0006235,1.15e-11,25;UBERON:0004161,1.15e-11,25;UBERON:0009856,2.91e-11,26;UBERON:0003350,1.24e-09,8;UBERON:0002365,1.25e-09,31;UBERON:0002330,1.25e-09,31;UBERON:0001155,1.04e-08,9;UBERON:0000485,1.04e-08,9;UBERON:0002368,1.18e-08,35;UBERON:0005911,2.70e-08,82;UBERON:0000059,2.32e-07,11;UBERON:0000949,5.75e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945398187686684,1.483485450861,1.61768505250044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chr9:71347655..71347671,+ | |||
|id=chr9:71347655..71347671,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.17e-21!4;CL:0000181!1.06e-15!12;CL:0000417!1.06e-15!12;CL:0000668!1.06e-15!12;CL:0000414!1.06e-15!12;CL:0000412!1.06e-15!12;CL:0000182!1.06e-15!12;CL:0000223!3.85e-12!59;CL:0002253!1.82e-11!2;CL:0002231!6.78e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002253;5.04e-34;2!CL:0000182;5.13e-23;12!CL:0002563;8.69e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.61e-34,2;CL:0000182,5.74e-23,12;CL:0002563,7.35e-18,4;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.49e-25;11!UBERON:0009497;2.40e-21;13!UBERON:0003104;1.08e-19;31!UBERON:0001041;6.23e-10;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;5.60e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,7.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001242!5.17e-21!4;UBERON:0001262!5.17e-21!4;UBERON:0004786!5.17e-21!4;UBERON:0004808!5.17e-21!4;UBERON:0001277!5.17e-21!4;UBERON:0003350!5.03e-17!5;UBERON:0003929!2.86e-13!54;UBERON:0004921!6.00e-12!129;UBERON:0004185!6.00e-12!129;UBERON:0000160!1.07e-11!27;UBERON:0005911!1.09e-11!82;UBERON:0002107!3.68e-10!19;UBERON:0006925!3.68e-10!19;UBERON:0008836!3.68e-10!19;UBERON:0000485!6.78e-10!9;UBERON:0001007!7.06e-10!155;UBERON:0001555!7.06e-10!155;UBERON:0007026!7.06e-10!155;UBERON:0001155!8.46e-10!9;UBERON:0005409!3.57e-09!35;UBERON:0004119!5.07e-09!169;UBERON:0000925!5.07e-09!169;UBERON:0006595!5.07e-09!169;UBERON:0008835!7.41e-09!22;UBERON:0003894!7.41e-09!22;UBERON:0009854!1.70e-08!23;UBERON:0000059!3.50e-08!11;UBERON:0007499!7.31e-08!25;UBERON:0009497!7.31e-08!25;UBERON:0000015!7.31e-08!25;UBERON:0002423!7.31e-08!25;UBERON:0006235!7.31e-08!25;UBERON:0004161!7.31e-08!25;UBERON:0000344!1.20e-07!12;UBERON:0000060!1.20e-07!12;UBERON:0005057!1.40e-07!26;UBERON:0009856!1.40e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.69e-18;4!UBERON:0001242;8.69e-18;4!UBERON:0001262;8.69e-18;4!UBERON:0004786;8.69e-18;4!UBERON:0004808;8.69e-18;4!UBERON:0001277;8.69e-18;4!UBERON:0002107;5.27e-15;19!UBERON:0006925;5.27e-15;19!UBERON:0004907;1.60e-14;5!UBERON:0002423;1.09e-11;25!UBERON:0000485;8.99e-11;7!UBERON:0003929;8.99e-11;7!UBERON:0003350;1.35e-09;8!UBERON:0002368;2.79e-09;33!UBERON:0001155;1.12e-08;9!UBERON:0002365;1.25e-08;31!UBERON:0002330;1.25e-08;31!UBERON:0000059;2.47e-07;11!UBERON:0000949;4.46e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,7.35e-18,4;UBERON:0001242,7.35e-18,4;UBERON:0001262,7.35e-18,4;UBERON:0004786,7.35e-18,4;UBERON:0004808,7.35e-18,4;UBERON:0001277,7.35e-18,4;UBERON:0002107,5.66e-15,19;UBERON:0006925,5.66e-15,19;UBERON:0008836,5.66e-15,19;UBERON:0004907,1.40e-14,5;UBERON:0008835,4.26e-13,22;UBERON:0003894,4.26e-13,22;UBERON:0009854,1.41e-12,23;UBERON:0003929,4.68e-12,54;UBERON:0007499,1.15e-11,25;UBERON:0009497,1.15e-11,25;UBERON:0000015,1.15e-11,25;UBERON:0002423,1.15e-11,25;UBERON:0006235,1.15e-11,25;UBERON:0004161,1.15e-11,25;UBERON:0009856,2.91e-11,26;UBERON:0003350,1.24e-09,8;UBERON:0002365,1.25e-09,31;UBERON:0002330,1.25e-09,31;UBERON:0001155,1.04e-08,9;UBERON:0000485,1.04e-08,9;UBERON:0002368,1.18e-08,35;UBERON:0005911,2.70e-08,82;UBERON:0000059,2.32e-07,11;UBERON:0000949,5.75e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945398187686684,1.483485450861,1.61768505250044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:71347655..71347671,+ | |||
}} |
Revision as of 09:14, 14 September 2013
Short description: | p@chr9:71347655..71347671, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:71347655..71347671, + |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.61e-34 | 2 |
hepatocyte | 5.74e-23 | 12 |
intestinal epithelial cell | 7.35e-18 | 4 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
rectum | 7.35e-18 | 4 |
intestinal mucosa | 7.35e-18 | 4 |
wall of intestine | 7.35e-18 | 4 |
gastrointestinal system mucosa | 7.35e-18 | 4 |
gastrointestinal system epithelium | 7.35e-18 | 4 |
intestinal epithelium | 7.35e-18 | 4 |
liver | 5.66e-15 | 19 |
digestive gland | 5.66e-15 | 19 |
liver bud | 5.66e-15 | 19 |
lower digestive tract | 1.40e-14 | 5 |
hepatic diverticulum | 4.26e-13 | 22 |
liver primordium | 4.26e-13 | 22 |
digestive tract diverticulum | 1.41e-12 | 23 |
gut epithelium | 4.68e-12 | 54 |
epithelial sac | 1.15e-11 | 25 |
epithelium of foregut-midgut junction | 1.15e-11 | 25 |
anatomical boundary | 1.15e-11 | 25 |
hepatobiliary system | 1.15e-11 | 25 |
foregut-midgut junction | 1.15e-11 | 25 |
septum transversum | 1.15e-11 | 25 |
sac | 2.91e-11 | 26 |
epithelium of mucosa | 1.24e-09 | 8 |
exocrine gland | 1.25e-09 | 31 |
exocrine system | 1.25e-09 | 31 |
colon | 1.04e-08 | 9 |
simple columnar epithelium | 1.04e-08 | 9 |
endocrine gland | 1.18e-08 | 35 |
endo-epithelium | 2.70e-08 | 82 |
large intestine | 2.32e-07 | 11 |
endocrine system | 5.75e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 7.07e-08 | 39 |
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