FFCP PHASE1:Hg19::chr10:104536836..104536854,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_at_chr10:104536836..104536854,- | |||
|id=chr10:104536836..104536854,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.07e-19;3!CL:0000632;1.01e-08;3!CL:0002557;3.72e-07;1!CL:0002594;9.63e-07;4!CL:0000569;9.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.08e-19,3;CL:0000632,1.19e-08,3;CL:0002557,7.40e-07,1;CL:0000569,7.64e-07,4;CL:0000011,7.64e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.72e-07;1!CL:0000011;9.63e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;3.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,5.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.29e-09!84;UBERON:0001981!2.28e-09!60;UBERON:0007500!2.28e-09!60;UBERON:0004537!2.28e-09!60;UBERON:0006965!2.28e-09!60;UBERON:0003914!3.75e-08!118;UBERON:0001637!4.33e-08!42;UBERON:0003509!4.33e-08!42;UBERON:0004572!4.33e-08!42;UBERON:0002049!8.58e-08!79;UBERON:0007798!8.58e-08!79;UBERON:0000055!2.04e-07!69;UBERON:0000490!2.12e-07!138;UBERON:0004535!3.13e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;3.72e-07;1!UBERON:0001389;3.72e-07;1!UBERON:0000026;3.72e-07;1!UBERON:0008784;3.72e-07;1!UBERON:0006058;3.72e-07;1!UBERON:0003663;3.72e-07;1!UBERON:0004256;3.72e-07;1!UBERON:0004708;3.72e-07;1!UBERON:0002101;3.72e-07;1!UBERON:0004709;3.72e-07;1!UBERON:0002529;3.72e-07;1!UBERON:0010538;3.72e-07;1!UBERON:0003661;3.72e-07;1!UBERON:0010890;3.72e-07;1!UBERON:0002471;3.72e-07;1!UBERON:0001383;3.72e-07;1!UBERON:0010758;3.72e-07;1!UBERON:0010707;3.72e-07;1!UBERON:0000978;3.72e-07;1!UBERON:0002103;3.72e-07;1!UBERON:0001665;3.72e-07;1!UBERON:0003823;3.72e-07;1!UBERON:0000154;3.72e-07;1!UBERON:0010709;3.72e-07;1!UBERON:0001310;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.59e-08,117;UBERON:0005418,1.85e-07,1;UBERON:0001389,1.85e-07,1;UBERON:0000026,1.85e-07,1;UBERON:0008784,1.85e-07,1;UBERON:0006058,1.85e-07,1;UBERON:0003663,1.85e-07,1;UBERON:0004256,1.85e-07,1;UBERON:0004708,1.85e-07,1;UBERON:0002101,1.85e-07,1;UBERON:0004709,1.85e-07,1;UBERON:0002529,1.85e-07,1;UBERON:0010538,1.85e-07,1;UBERON:0003661,1.85e-07,1;UBERON:0010890,1.85e-07,1;UBERON:0002471,1.85e-07,1;UBERON:0001383,1.85e-07,1;UBERON:0004357,1.85e-07,1;UBERON:0004347,1.85e-07,1;UBERON:0005420,1.85e-07,1;UBERON:0005732,1.85e-07,1;UBERON:0010758,1.85e-07,1;UBERON:0010707,1.85e-07,1;UBERON:0000978,1.85e-07,1;UBERON:0002103,1.85e-07,1;UBERON:0001665,1.85e-07,1;UBERON:0003823,1.85e-07,1;UBERON:0000154,1.85e-07,1;UBERON:0010709,1.85e-07,1;UBERON:0005733,1.85e-07,1;UBERON:0005730,1.85e-07,1;UBERON:0000996,3.41e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.245733936501509,2.09340350391728,0.218441372130172,0,0.123766352960047,0,0,1.80808358407193,0.730310090387373,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0.786728553697808,0.767658796194425,0.619264493264304,0.919421224478927,0.30120591877825,0,0,0,0.880801318004542,0,0,0,0,0,0,0.290796477559129,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0,0,19.0792499444274,18.3038371449641,17.8299600638191,1.19257444420023,0,0.347140501607594,0,0,0.275118041940067,0.835979866147242,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0.112611480483322,1.53316637465883,0.949265659568129,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.573673241497627,0,0,3.20246987189115,0.98667019366864,0,0,0.653847612453835,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,1.02088964844019,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,1.58531948758658,0.88369703398466,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0.791951872933429,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.289562613335158,0.410952645100767,0.716243852959582,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0.300946099727719,2.27407504055985,0,0.664225598535437,0.737476674166813,0,0,0.686286847621712,0,0.647142602455851,0.213455115606889,0.303127571446259,0,0,0.496215615637554,0.920771839728375,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,0,0,0.355123450626254,0.328508624055237,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.206082023295445,0,0,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0.801288320820636,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.55597265731176,0.143124886741991,0,0,0.190630193923825,0,0,0,2.35484592059769,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0.842516912477962,0.975267478179181,0,0,0,0,0,1.10273068709225,0,0.438450885253763,0,0,0.811641507850816,1.54911749049875,0.845086807596724,0.143411352204052,0,1.07001315444375,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0.597743964753209,0.552567831062295,0,0.102268682502155,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,1.06726497369676,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,3.2589686222951,0.919036730290385,0.655745261419609,0,0,0,0,1.14681839138014,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,2.57084640831947,0,0.947015026375446,0,0,0.915360273587694,0.453692771289717,1.24349760466224,1.92211694986524,0.159296767163702,0.449803112163605,0.465788870628778,1.24411862352257,0,0,0.150257608997218,0,0.406870733204662,1.27294061441792,1.18151612746737,0.464033759878494,0,4.80033317595784,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0.690860683462397,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969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| |||
|short_description=p@chr10:104536836..104536854,- | |||
}} |
Revision as of 04:44, 11 January 2014
Short description: | p@chr10:104536836..104536854, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104536836..104536854, - |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.08e-19 | 3 |
hepatic stellate cell | 1.19e-08 | 3 |
fibroblast of pulmonary artery | 7.40e-07 | 1 |
cardiac mesenchymal cell | 7.64e-07 | 4 |
migratory trunk neural crest cell | 7.64e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.59e-08 | 117 |
hindlimb bud | 1.85e-07 | 1 |
soleus muscle | 1.85e-07 | 1 |
appendage | 1.85e-07 | 1 |
lower limb segment | 1.85e-07 | 1 |
multi-limb segment region | 1.85e-07 | 1 |
hindlimb muscle | 1.85e-07 | 1 |
hindlimb zeugopod muscle | 1.85e-07 | 1 |
paired limb/fin | 1.85e-07 | 1 |
limb | 1.85e-07 | 1 |
pelvic appendage | 1.85e-07 | 1 |
limb segment | 1.85e-07 | 1 |
paired limb/fin segment | 1.85e-07 | 1 |
limb muscle | 1.85e-07 | 1 |
pelvic complex muscle | 1.85e-07 | 1 |
zeugopod | 1.85e-07 | 1 |
muscle of leg | 1.85e-07 | 1 |
paired limb/fin bud | 1.85e-07 | 1 |
limb bud | 1.85e-07 | 1 |
pelvic appendage bud | 1.85e-07 | 1 |
limb/fin field | 1.85e-07 | 1 |
subdivision of organism along appendicular axis | 1.85e-07 | 1 |
appendage girdle complex | 1.85e-07 | 1 |
leg | 1.85e-07 | 1 |
hindlimb | 1.85e-07 | 1 |
triceps surae | 1.85e-07 | 1 |
hindlimb zeugopod | 1.85e-07 | 1 |
posterior region of body | 1.85e-07 | 1 |
pelvic complex | 1.85e-07 | 1 |
limb field | 1.85e-07 | 1 |
hindlimb/pelvic fin field | 1.85e-07 | 1 |
vagina | 3.41e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 5.84e-07 | 1 |