FFCP PHASE1:Hg19::chr10:115939099..115939117,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56165 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11712 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=48bp_to_uc001lbh.1_5end | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_2_at_TDRD1_5end | |||
|id=chr10:115939099..115939117,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.12e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.68e-12;3!CL:0002552;7.50e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.00e-12,3;CL:0002552,9.23e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.40e-14;10!UBERON:0005564;1.40e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.65e-10;1!DOID:1357;1.65e-10;1!DOID:5093;7.08e-10;4!DOID:1612;7.08e-10;4!DOID:3151;7.22e-10;1!DOID:3149;7.22e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.65e-10,1;DOID:1357,1.65e-10,1;DOID:3151,6.91e-10,1;DOID:3149,6.91e-10,1;DOID:5093,6.93e-10,4;DOID:1612,6.93e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.42e-18!115;UBERON:0002619!4.62e-10!22;UBERON:0001950!1.14e-09!20;UBERON:0000473!4.91e-09!8;UBERON:0004121!1.41e-08!169;UBERON:0000956!1.54e-08!25;UBERON:0000203!1.54e-08!25;UBERON:0001869!2.31e-08!32;UBERON:0003135!3.66e-08!11;UBERON:0000924!3.85e-08!173;UBERON:0006601!3.85e-08!173;UBERON:0002780!8.18e-08!41;UBERON:0001890!8.18e-08!41;UBERON:0006240!8.18e-08!41;UBERON:0001893!1.11e-07!34;UBERON:0001049!1.23e-07!57;UBERON:0005068!1.23e-07!57;UBERON:0006241!1.23e-07!57;UBERON:0007135!1.23e-07!57;UBERON:0003080!1.55e-07!42;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0002616!3.24e-07!59;UBERON:0001017!6.73e-07!82;UBERON:0000153!8.37e-07!129;UBERON:0007811!8.37e-07!129;UBERON:0002791!8.41e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.63e-18;8!UBERON:0003135;2.85e-13;11!UBERON:0001764;1.65e-10;1!UBERON:0001825;1.65e-10;1!UBERON:0003101;5.85e-10;22!UBERON:0000079;5.85e-10;22!UBERON:0000991;5.13e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.71e-18,8;UBERON:0003135,2.90e-13,11;UBERON:0001764,1.65e-10,1;UBERON:0001825,1.65e-10,1;UBERON:0003101,6.09e-10,22;UBERON:0000079,6.09e-10,22;UBERON:0000991,5.17e-07,21;UBERON:0009196,5.17e-07,21;UBERON:0009117,5.17e-07,21;UBERON:0005564,5.17e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,2.62339686735876,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72131935057184,0,0,0,0,0,0,0,0,0,0,0,1.24864030732128,1.1409436430889,0,0,0,0,1.02077085627447,0,0.206651562351531,2.37600571456411,0,0,0,0,0,0.554128230968366,0.438977620880838,0.30648779579902,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.975789649036763,0.265059536642971,1.39432731443422,0.518305275076852,0.252320850875628,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.892144943985809,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0,0,0.384417447767103,0.511707249066704,0,0,0,0.177561725313127,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,4.6876996995342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.916641696046735,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.242998226632099,1.34173875039706,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,4.64579575232515,0.439656701034247,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8402782875445,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0.248385611765534,0,0,0,0,0,1.40500471742064,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0.128458450192919,1.41696576325585,0.478901577171454,0,0,0.553258019713743,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.472763092328763,0.781078098613847,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,1.25588948560822,0,0,0,8.42117605752624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.563903507879121,0.515663103788617,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.305966489225945,13.360870263278,0.643264296743914,8.27334879664838,3.18270532516606,3.48353369203032,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p2@TDRD1 | |||
}} |
Revision as of 05:05, 11 January 2014
Short description: | p2@TDRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TDRD1_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | 48bp_to_uc001lbh.1_5end |
EntrezGene: | TDRD1 |
HGNC: | 11712 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.00e-12 | 3 |
fibroblast of gingiva | 9.23e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 3.71e-18 | 8 |
male reproductive organ | 2.90e-13 | 11 |
maxillary sinus | 1.65e-10 | 1 |
paranasal sinus | 1.65e-10 | 1 |
male organism | 6.09e-10 | 22 |
male reproductive system | 6.09e-10 | 22 |
gonad | 5.17e-07 | 21 |
indifferent external genitalia | 5.17e-07 | 21 |
indifferent gonad | 5.17e-07 | 21 |
gonad primordium | 5.17e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.65e-10 | 1 |
maxillary sinus cancer | 1.65e-10 | 1 |
skin squamous cell carcinoma | 6.91e-10 | 1 |
keratoacanthoma | 6.91e-10 | 1 |
thoracic cancer | 6.93e-10 | 4 |
breast cancer | 6.93e-10 | 4 |