FFCP PHASE1:Hg19::chr10:135043493..135043510,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8433 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12634 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T230 | |||
|association_with_transcript=-267bp_to_ENST00000304477,NM_003577,uc001lmc.2_5end | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_2_at_UTF1_5end | |||
|id=chr10:135043493..135043510,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.05e-33!5;CL:0000039!6.10e-16!7;CL:0000586!6.10e-16!7;CL:0000540!2.50e-10!6;CL:0000031!2.50e-10!6;CL:0000404!2.50e-10!6;CL:0000047!7.31e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.01e-56;5!CL:0000039;2.74e-26;7!CL:0000586;2.74e-26;7!CL:0002321;1.21e-18;15!CL:0000148;1.09e-10;10!CL:0000540;3.69e-08;6!CL:0000404;3.69e-08;6!CL:0000147;8.82e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.01e-56,5;CL:0000039,2.75e-26,7;CL:0000586,2.75e-26,7;CL:0000148,1.09e-10,10;CL:0000541,1.09e-10,10;CL:0000540,3.50e-08,6;CL:0000031,3.50e-08,6;CL:0000404,3.50e-08,6;CL:0000147,8.82e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.56e-54;10!UBERON:0005564;4.56e-54;10!CL:0000031;3.69e-08;6 | |||
|ontology_enrichment_disease=DOID:3095!1.86e-10!22;DOID:2994!1.86e-10!22;DOID:225!1.11e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;8.89e-13;22!DOID:2994;8.89e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,9.22e-13,22;DOID:2994,9.22e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.20e-30!8;UBERON:0003135!9.20e-22!11;UBERON:0000991!6.10e-15!21;UBERON:0009196!6.10e-15!21;UBERON:0009117!6.10e-15!21;UBERON:0005564!6.10e-15!21;UBERON:0004176!3.19e-14!22;UBERON:0003101!1.32e-10!22;UBERON:0000079!1.32e-10!22;UBERON:0004177!1.32e-08!7;UBERON:0002323!3.93e-08!46;UBERON:0004458!1.46e-07!49;UBERON:0002370!3.13e-07!4;UBERON:0005058!3.13e-07!4;UBERON:0009113!3.13e-07!4;UBERON:0003295!3.13e-07!4;UBERON:0005562!3.13e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.75e-50;8!UBERON:0003135;1.97e-36;11!UBERON:0000991;1.67e-25;21!UBERON:0003101;4.36e-18;22!UBERON:0000079;4.36e-18;22!UBERON:0000922;3.31e-11;49!UBERON:0002323;6.96e-10;45!UBERON:0003133;2.84e-08;44!UBERON:0002553;6.07e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.75e-50,8;UBERON:0003135,1.97e-36,11;UBERON:0000991,1.71e-25,21;UBERON:0009196,1.71e-25,21;UBERON:0009117,1.71e-25,21;UBERON:0005564,1.71e-25,21;UBERON:0004176,2.60e-24,22;UBERON:0003101,4.36e-18,22;UBERON:0000079,4.36e-18,22;UBERON:0002323,2.59e-11,46;UBERON:0003133,8.16e-11,48;UBERON:0004458,1.40e-10,49;UBERON:0003886,1.54e-09,54;UBERON:0005156,1.13e-08,59;UBERON:0000990,1.13e-08,59;UBERON:0002553,2.29e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.8872458070045,12.3252684538981,21.7282673165999,27.0555353590117,26.9983310436922,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89355667237035,1.51293380256957,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78278214892252,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73163929909239,0,39.8776324291149,134.410354848577,42.087863986959,263.744331335579,6.51696804676859,5.35928260312357,0,0,0,0,0.258355639344024,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@UTF1 | |||
}} |
Revision as of 05:41, 11 January 2014
Short description: | p2@UTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UTF1_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | -267bp_to_ENST00000304477, NM_003577, uc001lmc.2_5end |
EntrezGene: | UTF1 |
HGNC: | 12634 |
UniProt: | Q5T230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.01e-56 | 5 |
germ line cell | 2.75e-26 | 7 |
germ cell | 2.75e-26 | 7 |
melanocyte | 1.09e-10 | 10 |
melanoblast | 1.09e-10 | 10 |
neuron | 3.50e-08 | 6 |
neuroblast | 3.50e-08 | 6 |
electrically signaling cell | 3.50e-08 | 6 |
pigment cell | 8.82e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 3.75e-50 | 8 |
male reproductive organ | 1.97e-36 | 11 |
gonad | 1.71e-25 | 21 |
indifferent external genitalia | 1.71e-25 | 21 |
indifferent gonad | 1.71e-25 | 21 |
gonad primordium | 1.71e-25 | 21 |
external genitalia | 2.60e-24 | 22 |
male organism | 4.36e-18 | 22 |
male reproductive system | 4.36e-18 | 22 |
body cavity | 2.59e-11 | 46 |
reproductive organ | 8.16e-11 | 48 |
body cavity or lining | 1.40e-10 | 49 |
body cavity precursor | 1.54e-09 | 54 |
reproductive structure | 1.13e-08 | 59 |
reproductive system | 1.13e-08 | 59 |
anatomical cavity | 2.29e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.22e-13 | 22 |
germ cell cancer | 9.22e-13 | 22 |