FFCP PHASE1:Hg19::chr10:18816514..18816549,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr10:18816514..18816549,+ | |||
|id=chr10:18816514..18816549,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.05e-15;2!CL:0000242;2.05e-15;2!CL:0002504;9.90e-11;3!CL:1000279;9.90e-11;3!CL:1000280;9.90e-11;3!CL:0000312;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.78e-15,2;CL:0002504,9.90e-11,3;CL:1000279,9.90e-11,3;CL:1000280,9.90e-11,3;CL:0000312,5.70e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.37e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.33e-15;2!DOID:1287;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.33e-15,2;DOID:1287,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-33!115;UBERON:0005743!1.51e-28!86;UBERON:0000073!1.09e-27!94;UBERON:0001016!1.09e-27!94;UBERON:0001017!2.78e-27!82;UBERON:0002346!3.84e-27!90;UBERON:0001049!4.27e-25!57;UBERON:0005068!4.27e-25!57;UBERON:0006241!4.27e-25!57;UBERON:0007135!4.27e-25!57;UBERON:0003075!4.57e-24!86;UBERON:0007284!4.57e-24!86;UBERON:0002616!6.04e-24!59;UBERON:0000955!1.36e-23!69;UBERON:0006238!1.36e-23!69;UBERON:0002780!1.42e-23!41;UBERON:0001890!1.42e-23!41;UBERON:0006240!1.42e-23!41;UBERON:0003080!7.52e-23!42;UBERON:0001893!2.99e-22!34;UBERON:0002791!8.61e-21!33;UBERON:0003056!1.04e-20!61;UBERON:0000924!1.78e-20!173;UBERON:0006601!1.78e-20!173;UBERON:0001869!7.89e-20!32;UBERON:0002619!6.01e-19!22;UBERON:0001950!1.79e-18!20;UBERON:0002020!3.41e-18!34;UBERON:0003528!3.41e-18!34;UBERON:0004121!3.65e-18!169;UBERON:0000956!3.09e-16!25;UBERON:0000203!3.09e-16!25;UBERON:0000033!2.15e-15!123;UBERON:0000153!3.55e-14!129;UBERON:0007811!3.55e-14!129;UBERON:0000200!8.26e-09!6;UBERON:0000064!4.69e-08!219;UBERON:0001155!1.00e-07!9;UBERON:0001872!2.03e-07!5;UBERON:0000475!3.79e-07!365;UBERON:0002771!3.82e-07!3;UBERON:0000483!5.37e-07!309;UBERON:0000119!8.37e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.15e-15;2!UBERON:0001905;2.05e-15;2!UBERON:0002757;2.05e-15;2!UBERON:0010134;2.05e-15;2!UBERON:0005408;2.05e-15;2!UBERON:0001899;2.05e-15;2!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0002784;2.26e-08;4!UBERON:0001872;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.15e-15,2;UBERON:0001905,2.37e-15,2;UBERON:0002757,2.37e-15,2;UBERON:0010134,2.37e-15,2;UBERON:0005408,2.37e-15,2;UBERON:0001899,2.37e-15,2;UBERON:0003296,2.43e-08,4;UBERON:0010133,2.43e-08,4;UBERON:0002784,2.43e-08,4;UBERON:0001872,5.38e-07,5;UBERON:0002780,8.88e-07,41;UBERON:0001890,8.88e-07,41;UBERON:0003080,8.88e-07,41;UBERON:0006240,8.88e-07,41 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,1.09814811894422,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0.591860433821602,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0.482385754501632,0,0.331737779793674,0.591095237907095,0.219385397153973,0.21787692703798,0,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,2.14613024068285,0,1.00775208730089,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.425246896606173,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,5.00307686098049,0.625954653532499,0.573409195690071,0.110929051536852,0.18628920882415,0.276697269872462,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.314531883711793,0,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.615349092722265,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.337687923091973,0.781078098613847,1.44680757550829,0.380494861163441,0,0,0.496211178389294,0.175871244359621,0,0,1.00885116665647,0,0.91064876540519,0,0.115233987555779,0,0.271878931907327,0.394636641377094,0,0,0.313972371402056,0.785577949580009,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0.3414369541879,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.439762066981716,0,0.154348316215889,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p@chr10:18816514..18816549,+ | |||
}} |
Revision as of 02:02, 11 January 2014
Short description: | p@chr10:18816514..18816549, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:18816514..18816549, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.78e-15 | 2 |
enteric smooth muscle cell | 9.90e-11 | 3 |
smooth muscle cell of large intestine | 9.90e-11 | 3 |
smooth muscle cell of colon | 9.90e-11 | 3 |
keratinocyte | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.15e-15 | 2 |
pineal body | 2.37e-15 | 2 |
regional part of epithalamus | 2.37e-15 | 2 |
secretory circumventricular organ | 2.37e-15 | 2 |
circumventricular organ | 2.37e-15 | 2 |
epithalamus | 2.37e-15 | 2 |
gland of diencephalon | 2.43e-08 | 4 |
neuroendocrine gland | 2.43e-08 | 4 |
regional part of diencephalon | 2.43e-08 | 4 |
parietal lobe | 5.38e-07 | 5 |
regional part of forebrain | 8.88e-07 | 41 |
forebrain | 8.88e-07 | 41 |
anterior neural tube | 8.88e-07 | 41 |
future forebrain | 8.88e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.33e-15 | 2 |
cardiovascular system disease | 1.82e-08 | 4 |