FFCP PHASE1:Hg19::chr10:34988014..34988029,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_at_chr10:34988014..34988029,- | |||
|id=chr10:34988014..34988029,- | |||
|ontology_enrichment_celltype=CL:0000066!3.73e-11!254;CL:1000497!3.94e-10!18;CL:0002518!3.94e-10!18;CL:1000507!9.29e-10!12;CL:1000494!9.29e-10!12;CL:1000449!4.00e-09!16;CL:0000239!1.20e-08!3;CL:1000615!1.20e-08!3;CL:0002306!1.20e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:1000497;9.52e-28;17!CL:0002518;9.52e-28;17!CL:1000449;6.02e-22;15!CL:1000507;2.11e-21;10!CL:1000494;2.11e-21;10!CL:0000239;1.77e-18;3!CL:1000615;1.77e-18;3!CL:0002306;1.77e-18;3!CL:0002681;8.60e-18;12!CL:0002584;8.60e-18;12!CL:0000319;5.42e-15;1!CL:0002591;1.72e-14;1!CL:0000159;3.81e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,6.87e-28,17;CL:0002518,6.87e-28,17;CL:1000449,4.43e-22,15;CL:1000507,1.28e-21,10;CL:1000494,1.28e-21,10;CL:0000239,1.04e-18,3;CL:1000615,1.04e-18,3;CL:0002306,1.04e-18,3;CL:0002681,6.34e-18,12;CL:0002584,6.34e-18,12;CL:0000319,5.42e-15,1;CL:0002591,2.75e-14,1;CL:0000066,9.56e-09,253;CL:0000159,3.82e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.47e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.57e-27;2!DOID:299;8.21e-19;25!DOID:3030;5.42e-15;1!DOID:5093;4.11e-14;4!DOID:1612;4.11e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.13e-27,2;DOID:299,9.03e-19,25;DOID:3030,5.42e-15,1;DOID:5093,5.37e-14,4;DOID:1612,5.37e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0009773!9.29e-10!12;UBERON:0001231!9.29e-10!12;UBERON:0004810!9.29e-10!12;UBERON:0004211!4.00e-09!16;UBERON:0001285!4.00e-09!16;UBERON:0007684!4.00e-09!16;UBERON:0003220!4.00e-09!16;UBERON:0004208!4.00e-09!16;UBERON:0002113!5.05e-09!27;UBERON:0003918!5.05e-09!27;UBERON:0005095!5.05e-09!27;UBERON:0007687!5.05e-09!27;UBERON:0006853!1.20e-08!3;UBERON:0007685!1.20e-08!3;UBERON:0004134!1.20e-08!3;UBERON:0006555!1.73e-08!17;UBERON:0005103!1.73e-08!17;UBERON:0000083!1.73e-08!17;UBERON:0009201!1.73e-08!17;UBERON:0004819!1.73e-08!17;UBERON:0006553!1.73e-08!17;UBERON:0003074!1.73e-08!17;UBERON:0003060!1.73e-08!17;UBERON:0000080!6.31e-08!18;UBERON:0002120!6.31e-08!18;UBERON:0004875!6.31e-08!18;UBERON:0005721!6.31e-08!18;UBERON:0005754!6.31e-08!18;UBERON:0007297!6.31e-08!18;UBERON:0000489!3.27e-07!32;UBERON:0004876!5.68e-07!20;UBERON:0001851!7.03e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.02e-22;15!UBERON:0004819;6.02e-22;15!UBERON:0001285;6.02e-22;15!UBERON:0007684;6.02e-22;15!UBERON:0004211;2.11e-21;10!UBERON:0009773;2.11e-21;10!UBERON:0001231;2.11e-21;10!UBERON:0004810;2.11e-21;10!UBERON:0002113;1.32e-19;24!UBERON:0011143;1.32e-19;24!UBERON:0006853;1.77e-18;3!UBERON:0007685;1.77e-18;3!UBERON:0004134;1.77e-18;3!UBERON:0001225;8.60e-18;12!UBERON:0008987;8.60e-18;12!UBERON:0000489;3.47e-16;29!UBERON:0006554;1.22e-15;30!UBERON:0001008;1.22e-15;30!UBERON:0001851;2.67e-14;15!UBERON:0000353;2.67e-14;15!UBERON:0000078;6.80e-08;2!UBERON:0002012;6.80e-08;2!UBERON:0008886;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.43e-22,15;UBERON:0009773,4.43e-22,15;UBERON:0001231,4.43e-22,15;UBERON:0001285,4.43e-22,15;UBERON:0007684,4.43e-22,15;UBERON:0004208,4.43e-22,15;UBERON:0004810,1.28e-21,10;UBERON:0006555,1.05e-20,16;UBERON:0004819,1.05e-20,16;UBERON:0006853,1.04e-18,3;UBERON:0007685,1.04e-18,3;UBERON:0004134,1.04e-18,3;UBERON:0002113,3.59e-18,26;UBERON:0003918,3.59e-18,26;UBERON:0011143,3.59e-18,26;UBERON:0005095,3.59e-18,26;UBERON:0007687,3.59e-18,26;UBERON:0001225,6.34e-18,12;UBERON:0008987,6.34e-18,12;UBERON:0000489,3.34e-15,31;UBERON:0001851,2.09e-14,15;UBERON:0000353,2.09e-14,15;UBERON:0006554,6.29e-10,47;UBERON:0001008,1.03e-09,48;UBERON:0010188,1.21e-09,6;UBERON:0002539,1.21e-09,6;UBERON:0008816,1.21e-09,6;UBERON:0003103,4.97e-09,68;UBERON:0005172,1.35e-08,54;UBERON:0005173,1.35e-08,54;UBERON:0000078,8.60e-08,2;UBERON:0007497,8.60e-08,2;UBERON:0003643,8.60e-08,2;UBERON:0003504,8.60e-08,2;UBERON:0003469,8.60e-08,2;UBERON:0003496,8.60e-08,2;UBERON:0002012,8.60e-08,2;UBERON:0008886,8.60e-08,2;UBERON:0007303,8.60e-08,2;UBERON:0002061,8.60e-08,2;UBERON:0005432,8.60e-08,2;UBERON:0004363,8.60e-08,2;UBERON:0002417,1.06e-07,60;UBERON:0000916,1.06e-07,60;UBERON:0009569,8.44e-07,112 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,1.51183915378974,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0,0,0,0,0.451199612907412,1.77135275340154,0.784349769176855,0,2.53323909342902,0,0,1.29549549661284,0,0,0,1.78413391131527,1.66215201785745,0.895499018888713,0,0,0.256450125116389,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.510450849978337,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,1.04171104434093,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68798451622422,1.46909527343233,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9845336444171,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.157363764404994,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0.337884881306145,8.71221163199019,0.345430341731199,0,0,0,0,0,0,11.7970996201785,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.366857197043358,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,14.0352934292104,0,0,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0.559277158988962,0,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:34988014..34988029,- | |||
}} |
Revision as of 02:34, 11 January 2014
Short description: | p@chr10:34988014..34988029, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:34988014..34988029, - |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 6.87e-28 | 17 |
kidney epithelial cell | 6.87e-28 | 17 |
epithelial cell of nephron | 4.43e-22 | 15 |
kidney tubule cell | 1.28e-21 | 10 |
nephron tubule epithelial cell | 1.28e-21 | 10 |
brush border epithelial cell | 1.04e-18 | 3 |
kidney cortex tubule cell | 1.04e-18 | 3 |
epithelial cell of proximal tubule | 1.04e-18 | 3 |
kidney cortical cell | 6.34e-18 | 12 |
renal cortical epithelial cell | 6.34e-18 | 12 |
mucus secreting cell | 5.42e-15 | 1 |
smooth muscle cell of the pulmonary artery | 2.75e-14 | 1 |
epithelial cell | 9.56e-09 | 253 |
seromucus secreting cell | 3.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.13e-27 | 2 |
adenocarcinoma | 9.03e-19 | 25 |
mucinous adenocarcinoma | 5.42e-15 | 1 |
thoracic cancer | 5.37e-14 | 4 |
breast cancer | 5.37e-14 | 4 |