FFCP PHASE1:Hg19::chr10:3527599..3527602,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_at_chr10:3527599..3527602,- | |||
|id=chr10:3527599..3527602,- | |||
|ontology_enrichment_celltype=CL:0002057!3.11e-43!42;CL:0000860!7.93e-40!45;CL:0000738!3.75e-37!140;CL:0002087!1.19e-33!119;CL:0002031!1.30e-33!124;CL:0000037!2.66e-32!172;CL:0000566!2.66e-32!172;CL:0000557!3.42e-30!71;CL:0000988!8.33e-30!182;CL:0002032!2.08e-29!165;CL:0000837!2.08e-29!165;CL:0002009!3.41e-29!65;CL:0000766!1.49e-27!76;CL:0000839!2.92e-26!70;CL:0002194!1.05e-25!63;CL:0000576!1.05e-25!63;CL:0000040!1.05e-25!63;CL:0000559!1.05e-25!63;CL:0000763!3.33e-23!112;CL:0000049!3.33e-23!112;CL:0000236!6.82e-13!14;CL:0002393!3.18e-11!9;CL:0002397!3.18e-11!9;CL:0000945!1.39e-10!24;CL:0000826!1.39e-10!24;CL:0000134!1.62e-09!358;CL:0000842!2.90e-09!3;CL:0002320!4.27e-09!365;CL:0000219!1.26e-07!390;CL:0000224!4.93e-07!4;CL:0001014!4.93e-07!2;CL:0001016!4.93e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.98e-20;13!CL:0002393;1.75e-16;6!CL:0002397;1.75e-16;6!CL:0000945;1.53e-15;24!CL:0000766;3.01e-14;69!CL:0000860;6.02e-14;33!CL:0002057;6.02e-14;33!CL:0000576;5.52e-13;48!CL:0002087;4.44e-11;104!CL:0000473;1.29e-10;39!CL:0000234;1.29e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-23,42;CL:0002057,1.62e-23,42;CL:0002031,8.79e-23,120;CL:0000738,1.86e-22,136;CL:0002087,5.86e-21,115;CL:0000473,2.05e-20,48;CL:0000234,2.05e-20,48;CL:0000236,5.32e-19,14;CL:0002009,7.91e-19,61;CL:0002032,1.26e-18,161;CL:0000837,1.26e-18,161;CL:0000037,9.35e-18,168;CL:0000557,4.95e-17,67;CL:0000988,9.78e-17,177;CL:0002194,4.57e-16,59;CL:0000576,4.57e-16,59;CL:0000040,4.57e-16,59;CL:0000559,4.57e-16,59;CL:0000766,9.85e-16,72;CL:0000945,1.37e-15,24;CL:0000826,1.37e-15,24;CL:0000839,3.02e-14,66;CL:0000763,4.93e-12,108;CL:0000049,4.93e-12,108;CL:0002393,3.09e-11,9;CL:0002397,3.09e-11,9;CL:0000134,4.11e-07,354;CL:0000838,5.67e-07,52;CL:0002320,6.36e-07,361;CL:0000542,7.83e-07,53;CL:0000051,7.83e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;8.15e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.01e-11;1!DOID:0070004;1.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,7.76e-12,1;DOID:0070004,7.76e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.77e-28!102;UBERON:0003061!2.77e-28!102;UBERON:0002371!5.90e-28!80;UBERON:0002193!2.06e-26!112;UBERON:0001474!2.07e-25!86;UBERON:0002405!9.31e-21!115;UBERON:0004765!2.25e-20!101;UBERON:0001434!2.25e-20!101;UBERON:0002204!3.99e-09!167;UBERON:0002384!1.59e-08!375;UBERON:0003081!1.97e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.53e-18,76;UBERON:0001474,2.20e-16,82;UBERON:0004765,8.62e-15,90;UBERON:0002405,2.91e-14,93;UBERON:0002390,1.87e-13,98;UBERON:0003061,1.87e-13,98;UBERON:0001434,3.75e-13,100;UBERON:0002193,4.66e-12,108;UBERON:0002204,3.45e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.309632246632152,0,0,0,0,0,0,1.66198622559563,2.20598892217156,2.38711957787437,0,0,0,0,0,0,0.464858073811369,0,0.619412741790207,0,0.512321413058201,0.945928919554341,1.03423704220986,1.93645405075148,4.06279459783025,0,0,0,0.612167784741805,2.24650318953266,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,1.08594422352558,1.21079900526674,0.368277635987565,1.26584954976354,0.211255286311942,0.425208599930087,0,0,0,0.16072558669708,0.285012743741249,0,0,0,1.09227722252426,0.889509253863555,0.853460445133014,0.800791974072025,0,1.98313461835459,0,31.3067133010197,7.6340834618222,14.9086558968839,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,1.349843349309,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:3527599..3527602,- | |||
}} |
Revision as of 01:23, 11 January 2014
Short description: | p@chr10:3527599..3527602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3527599..3527602, - |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.53e-18 | 76 |
bone element | 2.20e-16 | 82 |
skeletal element | 8.62e-15 | 90 |
immune system | 2.91e-14 | 93 |
hematopoietic system | 1.87e-13 | 98 |
blood island | 1.87e-13 | 98 |
skeletal system | 3.75e-13 | 100 |
hemolymphoid system | 4.66e-12 | 108 |
musculoskeletal system | 3.45e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 7.76e-12 | 1 |
myeloma | 7.76e-12 | 1 |