FFCP PHASE1:Hg19::chr11:35198211..35198235,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1681 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENST00000531118_5end | |||
|coexpression_cluster_id=C620 | |||
|description=CAGE_peak_11_at_CD44_5end | |||
|id=chr11:35198211..35198235,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.28e-17!42;CL:0000860!1.04e-16!45;CL:0000557!3.44e-15!71;CL:0002009!7.39e-15!65;CL:0000766!1.15e-14!76;CL:0000839!1.65e-14!70;CL:0002194!2.73e-14!63;CL:0000576!2.73e-14!63;CL:0000040!2.73e-14!63;CL:0000559!2.73e-14!63;CL:0002371!8.10e-08!591;CL:0000723!1.91e-07!436;CL:0000048!2.50e-07!430;CL:0000055!7.41e-07!180;CL:0000144!8.91e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.94e-22;33!CL:0002057;3.94e-22;33!CL:0000473;1.39e-18;39!CL:0000234;1.39e-18;39!CL:0000576;1.21e-09;48!CL:0000766;9.82e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.34e-19,48;CL:0000234,1.34e-19,48;CL:0000860,4.33e-19,42;CL:0002057,4.33e-19,42;CL:0000557,2.14e-15,67;CL:0002009,3.60e-15,61;CL:0002194,1.80e-14,59;CL:0000576,1.80e-14,59;CL:0000040,1.80e-14,59;CL:0000559,1.80e-14,59;CL:0000839,3.34e-14,66;CL:0000766,5.01e-14,72;CL:0000723,1.50e-07,433;CL:0000048,2.74e-07,427;CL:0000034,7.40e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.27e-16!167;UBERON:0002371!3.25e-15!80;UBERON:0004765!5.51e-13!101;UBERON:0001434!5.51e-13!101;UBERON:0001474!2.27e-12!86;UBERON:0002390!9.44e-10!102;UBERON:0003061!9.44e-10!102;UBERON:0002193!4.56e-08!112;UBERON:0003102!4.35e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.20e-16,167;UBERON:0002371,9.73e-15,76;UBERON:0001434,9.10e-13,100;UBERON:0001474,1.12e-12,82;UBERON:0004765,1.49e-12,90;UBERON:0002405,8.68e-10,93;UBERON:0002390,2.48e-09,98;UBERON:0003061,2.48e-09,98;UBERON:0002193,8.11e-08,108;UBERON:0000926,2.29e-07,315;UBERON:0004120,2.29e-07,315;UBERON:0006603,2.29e-07,315 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,1.30592814099919,0.245733936501509,0,0,0,1.11389717664042,3.31397375727916,3.36162573225888,3.01347264011988,2.92124036154949,0.487932798790507,0.492484232307152,0.612002073732759,0.940364164434263,0.286235987131057,4.10623275218653,1.50651167513763,0.61130724598361,0.57470412614962,0.708397031823113,1.96682138424452,0.767658796194425,0.77408061658038,0.919421224478927,0,1.47901604066715,0,0,0,0,6.61796676651468,2.82114131930607,0.223915474239924,0.32389366601898,0.515151135268373,9.16008904311258,7.935394817465,6.79235371325885,9.99444858694444,11.9238687526329,8.3620720141678,10.3569261235974,7.17249978281482,5.20260905754887,12.0660988257816,8.39130088658974,4.06279459783025,10.7298133539285,5.45812300115692,4.04502272001152,17.4467818651414,5.77672248736969,7.67204550958849,10.5552416059749,6.98122801675712,8.09827026012119,19.7342282267437,22.1280237629545,18.0618452208717,10.80369260604,9.90817544998383,3.04064382587163,12.7133895553007,5.52416453981347,5.06339819905415,0.422510572623884,0.850417199860174,0.838634582033504,0.786300418025466,1.35159203557356,1.44653028027372,0.285012743741249,1.19350006319454,0.730656615058536,0,0,0.889509253863555,0,1.20118796110804,0,0,0,1.1384259382189,2.34894875748376,1.91136614062614,1.32171328579026,0,0,0.786839080455332,3.93010762749165,3.90642848099067,0.334372990781356,0.651844533267181,0.473447805734733,1.94826728407911,0.779873198196215,0.883817722424512,1.32920336750173,0.812411591295047,0.512365278902701,0.520237390239513,1.47994114143309,0.829050053357545,1.73881851441031,1.63115219478266,1.07016331235885,1.04535523804977,0.339928028092699,0,0.34362744548263,1.26509846009751,0,0,0.950452044448374,0.752875595388864,0.639933055772092,0,0.947109008176067,0,1.00803371612366,3.20928234940209,1.44824403882799,2.43806866313962,0,0,1.44575660953827,0.50133791063589,4.05570253090306,0,2.91980922181582,0.0945348171640679,0.443458794925128,0.087834785693126,0.261958150995425,1.09288586487763,1.85392221392215,0.649094787309367,0.870648686496336,3.32394901297163,0.715471872916026,0,0.74291500265913,0.198762407366705,0,0.347140501607594,0,1.67799774483962,1.92582629358047,1.04497483268405,0,0.35576626268671,0,0,0.760272105718513,0,0.735326160691737,2.43042584364528,0,0,0,0,0,0.366403487860815,0,0,0.436094052142534,0.993943903390637,1.13967460498122,0.662045904066094,5.16305917347865,0.709336764396714,2.24271040056923,0,1.48000529050296,0,0.808264032418128,0.490385709340376,0.302714855289863,1.72852777344,0.70296429550139,0.312160076830321,0.570471821544449,1.04614076386261,1.29177948508141,2.10434827678571,1.12360645361799,0.61246251376468,1.59684612505298,1.65321249881225,2.37600571456411,2.47266929278557,0.910161361938026,1.43723628363248,0.505008341862199,1.25118519871964,0.277064115484183,2.63386572528503,1.22595118319608,1.35214253015937,0.226864366320042,2.69084453533293,0.640672166455702,0.211931901159562,5.40163972951924,1.75189299705346,2.57640540045629,0.930584281657949,3.54430297706659,0.876933046450788,0.252433774244115,0.828449087780694,2.90962902273861,5.32514388774922,2.11579406278045,0.67824236924195,1.54608682530637,1.36373060295417,1.43402297694502,0.121973706129595,0,0,0.310983165046111,0.252320850875628,0,1.56449532329816,3.21620469096443,1.38134921352481,1.85747171212792,1.44375896333917,1.41968160047813,1.01150814046861,1.68707720918437,1.43382164552112,0.217879444092406,0.237270619111097,1.07865046528132,1.17732879075208,1.53898862778556,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0.686271241194102,1.64625428112938,1.1240175325762,1.50793458617446,1.20364978706088,0.325808305310325,1.03993478527958,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0.738651018262192,1.63802985597466,2.82399208348584,0.93733833986777,0.671928512795438,1.13420077793909,0.716468181622786,1.45316969256981,4.60059214998253,0.492663237895943,0.704387472105808,7.04915592838625,5.47655822984453,4.54472760334968,1.0159663086747,3.05590740446622,2.34434894420094,3.4214489204541,2.26220483947312,4.50514586765876,2.5724378936752,0.112131084345361,0,0.51336800074665,0.904902010304444,3.57656445851882,3.381211010224,0.797814349754612,5.2003718455683,0.514414748524284,1.41849132023278,1.3321108950805,1.00084595560703,0.542621605391443,0.823240336780769,0.65147236858747,0,0.791951872933429,1.50719688529793,1.74306691720059,1.69954085009497,1.2162378064119,1.00451418286425,4.21667878966063,0.718874566474748,0,2.85273810081437,0.868687840005475,3.08214483825575,1.43248770591916,0.784596007954691,0.394061520403854,1.94064817373566,0.641715181398742,1.77866236955724,0,0.773288812777695,0.502548796003046,1.27587750330633,0.749007023947182,5.9832291840805,2.07207756718018,0.981531933753119,2.00068208423871,1.08506009479894,3.11956292296211,8.3861624734666,2.20783381047509,2.10854546986884,0.601892199455438,0,2.0694614258501,1.32845119707087,1.10621501125022,2.17209036170207,0.391602314925481,0,0,3.66714141391649,2.24127871387233,0,0,0,0,0.460385919864187,0.841980283299221,0.896974044789907,1.53512174720011,1.93024705372329,1.48418066444991,4.78050050788232,1.77561725313127,0.821271560138091,3.63478100428535,1.97557643381931,0.241718899183244,3.80962293576241,0.736647911487171,2.98517565227978,4.91646153618136,3.93373244878272,0,0.385076685522074,0,1.46139224653261,1.37217117560738,0,0.680374821106063,1.72732732881711,0,0.270946437543853,0,0.509752546090077,2.49322802678617,1.11937377361089,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.309123034943167,0.183138929636687,0,0.574265537996172,3.25030123018261,0,0.580024309752732,1.23238893691716,1.07452572308291,0.827019434907183,0.429680979473094,1.0151168573996,1.19317278382541,0.0890320356467374,0.495854746082934,3.65161127993702,1.40373983744043,2.6301023022443,1.39453664789186,4.40737285562896,1.3940745403212,0.616067160352178,0,2.60979897622522,1.11194531462352,1.43124886741991,0,0.316379424718726,0.190630193923825,0.255897791311334,2.1396949401696,0.318203247925937,5.49464048139461,0.539617372749944,3.0199073270966,1.53156123049392,1.01091240786658,0,1.26377536871694,0.48763373908959,3.65570234446927,11.6215161432431,2.18399858252777,6.50464986987079,3.39024349860728,0.551365343546124,4.64407282668854,3.06915619677634,0.578775534266688,1.31178950409327,1.01455188481352,3.40805847909725,2.81695602532241,0.286822704408103,0.196498082026242,1.78335525740625,2.83808851256478,4.85547561184627,2.30506425071931,0.75894634753143,0.349934720244983,0.384888450902048,1.34060455107157,4.3556393944529,0.282431402330337,0,0,1.33029046061003,1.83778720165568,1.01489521846434,0,1.70894156152249,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,1.22520107990516,0.185803175125719,0,0,0,0.997896857164083,0.383010740264733,2.75175657541048,0.973865820823666,1.40398589056729,0,0,0,0.50787533340481,0.481764225311099,0.605399121573143,0.851692475380653,0.343505344755765,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,7.32758329595204,0,0.748562161632879,0.73254089635947,0,0,1.13654458722565,0,0,0,0,0.281338832821026,0.890469640183247,0,0,2.98871982376605,1.38141957765574,0,2.14764233254525,0.984678443688556,2.48831670129446,0.718946809178615,0,0.511572370226872,1.38100767891707,0,2.22273980289274,0,0.185536196323703,0,0.520855522170466,0,2.17499872630438,0.910347586283997,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0.557694977114413,0.692552326534174,0.113942055847001,0,0,0,0.638002319463839,0.549585560411174,0,2.04386596391473,0.627921025580099,0,0,0,0,0,0,2.95397290339238,0,0,0,0.995261931078505,0.265372693510018,3.05515072466813,0,0.247127877893006,0.208843899010911,0.202203398942031,0,0,0,0.586993856796269,3.15614493394321,0.394584402849391,0,0,0.252746318513952,0.150323419414493,0,1.32930774541437,3.30991955875499,0.313932918407225,0,0.284609546029793,0.138674673013139,1.56203764501618,0.391969589657511,0.435296032902013,0.873633341210151,1.71986032471617,1.16107597546902,0.65780385377567,0.903270027585302,0.872901148395775,0,0.90392296312213,2.60379656828827,1.39100228192093,0,0,0.64127056201227,0.640358984218058,3.9961921916426,0.288180834308212,0,0,0.576219191952599,0.372757606696298,0.471388069233591,0.543616824294456,0.836822770498666,2.54995544090804,0,0,0.410716136675979,0,3.43812353135966,0.262887354279314,0.558564802544508,0.458320848023367,2.15361907373044,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,1.08089965062721,0,0,0,0,0.0984274815147488,0.254019996197353,0,0.544813624446302,0,0,0.415440338029185,1.799791132412,2.32140586367385,0,1.0063040627978,0.236417121897595,0.104909176269996,1.05600336519407,0.179287339332845,0.191915197319445,0.714695326373367,0,0.5085370753095,7.60199442455198,9.50643640321395,15.6761932852516,0,0.328370082997356,3.23737241392301,0.566560457600628,0,2.65013777824443,0.258565912723101,0.66116300871345,0,0.704815022316672,0.961086713109252,0.157204305099666,2.48543433208317,3.47316215268366,0.197611631897944,0,1.27668251554036,0,0,0.306345576763462,0.327872630709804,0,0,0.488105059607853,0.1251909307065,2.86704597845036,1.22021956690538,0.683060432355218,0.138348634936231,0.74988244777264,0.758245587708239,1.14186133417987,14.5864808212866,0,0.144921028610825,1.49254802886874,0,1.10961172300523,1.89403005275089,1.50940741051545,0.889811221596536,2.51724075236616,2.87338755150154,0.777186002913902,1.77426179987561,1.75226443880073,3.59842489730884,1.86315548251511,1.65882483136342,1.32920857278997,1.04349012362347,0.901545653983311,3.04644169735036,2.03435366602331,0.363697318405119,2.25562169789226,4.17630383890644,1.59238355479446,1.20008329398946,1.37358282073117,2.69399591012735,0,1.34833881285112,0.214441591374926,0.521988583930423,2.72047110614727,3.24131464053368,2.20263034055821,2.50724377514082,4.01441881309264,0.438568099157414,2.29695889729645,1.54331230616732,1.68942440653073,0,0.345430341731199,5.46947921119288,0.276516872303462,0.584580926518165,0,0,1.31043939538565,1.2288645437686,1.05656061679314,0.19998739585493,0.213383459388282,0.861074898304078,2.27006381426734,0,0,1.86623178009892,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0.636008701306837,0,0,1.05802783107205,13.781046480894,0,0,0.798169295285756,0.205116364240755,0,0,0.484426936895553,0,0,0.471878893390961,3.85200056895526,0.577628330751691,1.1441462864015,0,0,0.0752103283492573,1.21023041222112,3.12605604493237,0,3.76675410273223,0.739280431085226,0.135075169236789,0.781078098613847,0.206686796501184,0.126831620387814,0,3.83780436800028,4.46590060550365,0.527613733078862,1.78867398695433,0,0.336283722218824,0,0,0.266107110487916,0.460935950223117,1.20041606606193,0.203909198930495,0.0657727735628491,0.118193840883968,0.111231401892069,0.235479278551542,0.157115589916002,0,1.82631744101899,0.215927591218621,0.47775168788705,0.78624198594322,0,0,0,0.801711364730253,3.52267479077163,2.3900586793153,0.691259661814092,1.29068207646083,1.06498800657509,1.10777426186905,1.27016115057279,0.22910686854405,2.17144469965024,0.955538938977433,0.223710863595585,0.196300467230486,3.29178397452127,0,0.615976841137482,1.1598144313382,0.485710993059139,0,0.198950775161368,0.475680363110274,0.67767649223376,0,0,0,1.09279780251979,0,1.22574160876953,0,3.53355240806901,1.48523200163543,0,1.52934403219035,0.657887425858975,0.515663103788617,0.199882311849858,1.07132363163395,5.64631794745107,0,0.730336388246517,3.66983426723633,1.29005624836306,0,0.0679914901909147,0,1.0580536810308,3.71995018166751,4.15958065768276,1.73050624849516,0.252332849670158,0.109265571963696,0,0.305966489225945,0,0.459474497674225,0,0.227336094654718,0,0.829169439458779,0.724030971033267,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0.784923038064294,0.25458863311266,0.606351566874658,3.70118471424834,0,0.80822463617505,0.215166616178029,0.332660356546013,0.0814032686109745,0.213454691755431,3.8614456457388,0.718601616852695,0,0.733448665097199,1.22068853494722,1.33151354837103,0.805095174364105,1.60284246151616 | |||
|short_description=p11@CD44 | |||
}} |
Revision as of 07:15, 11 January 2014
Short description: | p11@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_11_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | 2bp_to_ENST00000531118_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.34e-19 | 48 |
phagocyte | 1.34e-19 | 48 |
classical monocyte | 4.33e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.33e-19 | 42 |
granulocyte monocyte progenitor cell | 2.14e-15 | 67 |
macrophage dendritic cell progenitor | 3.60e-15 | 61 |
monopoietic cell | 1.80e-14 | 59 |
monocyte | 1.80e-14 | 59 |
monoblast | 1.80e-14 | 59 |
promonocyte | 1.80e-14 | 59 |
myeloid lineage restricted progenitor cell | 3.34e-14 | 66 |
myeloid leukocyte | 5.01e-14 | 72 |
somatic stem cell | 1.50e-07 | 433 |
multi fate stem cell | 2.74e-07 | 427 |
stem cell | 7.40e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.20e-16 | 167 |
bone marrow | 9.73e-15 | 76 |
skeletal system | 9.10e-13 | 100 |
bone element | 1.12e-12 | 82 |
skeletal element | 1.49e-12 | 90 |
immune system | 8.68e-10 | 93 |
hematopoietic system | 2.48e-09 | 98 |
blood island | 2.48e-09 | 98 |
hemolymphoid system | 8.11e-08 | 108 |
mesoderm | 2.29e-07 | 315 |
mesoderm-derived structure | 2.29e-07 | 315 |
presumptive mesoderm | 2.29e-07 | 315 |