FFCP PHASE1:Hg19::chr11:64612199..64612220,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55561 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29829 | |||
|TSSclassifier=strong | |||
|UniProt=Q6DT37 | |||
|association_with_transcript=-158bp_to_ENST00000342711,NM_017525,uc001obs.3_5end | |||
|description=CAGE_peak_2_at_CDC42BPG_5end | |||
|id=chr11:64612199..64612220,- | |||
|ontology_enrichment_celltype=CL:0000066!2.60e-14!254;CL:0002076!6.88e-13!43;CL:0000223!1.12e-09!59;CL:0002251!2.48e-07!21;CL:0002368!9.85e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.85e-07;19!CL:0002202;9.63e-07;9!CL:0002632;9.63e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.07e-07,19;CL:0000066,2.33e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.35e-09;3 | |||
|ontology_enrichment_disease=DOID:305!2.19e-13!106;DOID:1749!2.63e-09!14;DOID:0050687!5.66e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.28e-11;4!DOID:1612;1.28e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.72e-11,4;DOID:1612,2.72e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.81e-15!169;UBERON:0000925!4.81e-15!169;UBERON:0006595!4.81e-15!169;UBERON:0000464!2.24e-11!104;UBERON:0001007!3.21e-11!155;UBERON:0001555!3.21e-11!155;UBERON:0007026!3.21e-11!155;UBERON:0004921!3.20e-10!129;UBERON:0004185!3.20e-10!129;UBERON:0000466!4.63e-09!126;UBERON:0001004!7.64e-09!72;UBERON:0000077!1.32e-08!130;UBERON:0005178!2.75e-07!34;UBERON:0002224!2.75e-07!34;UBERON:0005631!5.30e-07!14;UBERON:0000158!5.30e-07!14;UBERON:0005153!5.87e-07!37;UBERON:0005911!6.21e-07!82;UBERON:0005181!7.04e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.13e-09;7!UBERON:0005631;5.78e-09;10!UBERON:0000158;5.78e-09;10!UBERON:0000478;4.44e-07;24!UBERON:0005178;4.59e-07;34!UBERON:0002224;4.59e-07;34!UBERON:0005181;6.09e-07;35!UBERON:0004921;9.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.49e-14,14;UBERON:0000158,7.49e-14,14;UBERON:0000305,2.44e-09,7;UBERON:0000915,3.03e-08,52;UBERON:0004871,4.07e-08,8;UBERON:0005178,1.59e-07,34;UBERON:0002224,1.59e-07,34;UBERON:0009569,2.56e-07,112;UBERON:0000478,2.57e-07,24;UBERON:0005181,3.06e-07,35;UBERON:0005177,5.96e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,1.09220686065086,1.31883489114227,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,1.50602959389125,1.47901604066715,0,0.142169232487422,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0,0,0.574752439954483,0,0.954053754535364,1.1384259382189,0,0,0,0,0,0.196709770113833,0.786021525498329,1.02800749499755,0.668745981562712,0.977766799900771,0,1.94826728407911,0.222820913770347,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0.593146252648242,0.535081656179426,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,1.95325036156926,0,0.752875595388864,0.383959833463255,1.24930726552346,0.947109008176067,0.821127996921047,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.785874452986276,1.09288586487763,1.85392221392215,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.573609190778008,0.731842236777572,0.132529768321485,0.348581828608555,0.829288440122964,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0.439001141634502,1.1240175325762,0.502644862058154,0.925884451585296,0,0,0,0.231860809950154,0,0,0,0,3.95102198979638,2.57545848628462,0,0,0,0.93733833986777,1.00789276919316,0.425325291727159,0.358234090811393,0,1.53353071666084,0,0.088048434013226,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,1.5156378572313,0,1.81434175997808,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.604297247958111,1.00253235151642,0.644566922551274,0,0,0,1.35359883872224,0.308061348417659,0,0,0.633309773357254,0,0,0,0,0.541892875087706,1.00337954770971,1.27438136522519,1.66215201785745,0.223874754722178,0,0,0,0.656029291399411,0,0.721287081534056,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.768760269460425,2.80747967488085,0.50578890427775,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,1.05844323998063,0.670302275535787,1.08890984861323,0.753150406214233,0.86101074534246,3.36942951335251,0.886860307073351,0.459446800413919,0,0,0,0.238231775457789,0,0,0,1.58625035258854,0,0,0.735120647943095,0,0,0,0.318852545457645,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,3.10367830158997,2.67268212749375,1.53580351049616,0,0.140669416410513,0,0,0.844501632511974,0.19924798825107,0,0.755798243562828,0,0,0,0.898683511473268,0.358042349351218,0,0.197286811273867,0,0,0,0,0,1.04171104434093,2.0990399999087,0,1.137934482855,1.01701460117107,0.472775363535873,0,0,0.173624994933292,0,0,3.05163472634166,4.42317039724898,2.06883333267483,0.219385397153973,0,1.53366118706464,0.153900517007594,0,2.3056390438806,1.34636466614658,0.54323685961004,1.91400695839152,0.457987967009312,0.533034776018635,0,0,0.166211681900156,0.676786981851542,0.980312671588698,0.167821586975843,0,0.317873157960757,0,0,0.282706142867882,0,0.995261931078505,1.68069372556344,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0.782658475728359,0,1.18375320854817,0,0,0,0.300646838828985,0.207376382794494,0.664653872707185,0,0,0,0,0,0.867798691675654,0.195984794828755,0.609414446062818,0.698906672968121,0,0,0.0730893170861856,0.164230914106418,1.26085721434945,0,0,0,0,0,0.977756913674015,0.320635281006135,1.28071796843612,0.19980960958213,0.288180834308212,0.114536596165916,0.171594997861965,0.14405479798815,0,1.41416420770077,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0.0787831823072236,0.329663433524666,0.13480708770837,0,0,0,0,0.482259445395058,0.275078873194468,0,0,0.77380195455795,0,0,1.18208560948797,1.20645552710496,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0.171086837884329,0.704815022316672,1.06787412567695,0.471612915298998,0.414239055347196,0,0,0.365377795142688,1.27668251554036,0,0,0,0,0.471162288750703,0,0,0,0.573409195690071,0.665574309221114,0.0620964029413835,0,0,0.151649117541648,0,0,2.34167452903441,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0.127894371303652,0,0,0,0.169732529954025,0,0,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0.88332946650923,0.707818340086442,0.550285795565037,1.38630799380406,0,0,0,0.0752103283492573,0,1.56302802246618,1.8333468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| |||
|short_description=p2@CDC42BPG | |||
}} |
Revision as of 08:28, 11 January 2014
Short description: | p2@CDC42BPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC42BPG_5end |
Coexpression cluster: | NA |
Association with transcript: | -158bp_to_ENST00000342711, NM_017525, uc001obs.3_5end |
EntrezGene: | CDC42BPG |
HGNC: | 29829 |
UniProt: | Q6DT37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.07e-07 | 19 |
epithelial cell | 2.33e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.49e-14 | 14 |
membranous layer | 7.49e-14 | 14 |
amnion | 2.44e-09 | 7 |
thoracic segment of trunk | 3.03e-08 | 52 |
somatic layer of lateral plate mesoderm | 4.07e-08 | 8 |
thoracic cavity element | 1.59e-07 | 34 |
thoracic cavity | 1.59e-07 | 34 |
subdivision of trunk | 2.56e-07 | 112 |
extraembryonic structure | 2.57e-07 | 24 |
thoracic segment organ | 3.06e-07 | 35 |
trunk region element | 5.96e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.72e-11 | 4 |
breast cancer | 2.72e-11 | 4 |