FFCP PHASE1:Hg19::chr12:6646104..6646127,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2597 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4141 | |||
|TSSclassifier=not | |||
|UniProt=Q5ZEY3 | |||
|association_with_transcript=-325bp_to_uc001qox.1_5end | |||
|description=CAGE_peak_8_at_GAPDH_5end | |||
|id=chr12:6646104..6646127,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.55e-19!45;CL:0002057!3.30e-19!42;CL:0002009!1.95e-15!65;CL:0002194!1.83e-14!63;CL:0000576!1.83e-14!63;CL:0000040!1.83e-14!63;CL:0000559!1.83e-14!63;CL:0000557!2.81e-13!71;CL:0000839!1.17e-12!70;CL:0000766!3.82e-10!76;CL:0000763!1.28e-07!112;CL:0000049!1.28e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.54e-31;33!CL:0002057;6.54e-31;33!CL:0000473;1.14e-25;39!CL:0000234;1.14e-25;39!CL:0000576;5.46e-15;48!CL:0000766;8.63e-10;69!CL:0000197;5.02e-07;6!CL:0000098;5.02e-07;6!CL:0002167;5.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.16e-29,48;CL:0000234,2.16e-29,48;CL:0000860,3.37e-28,42;CL:0002057,3.37e-28,42;CL:0002009,2.75e-23,61;CL:0002194,2.35e-21,59;CL:0000576,2.35e-21,59;CL:0000040,2.35e-21,59;CL:0000559,2.35e-21,59;CL:0000557,2.99e-20,67;CL:0000839,4.87e-18,66;CL:0000766,1.00e-15,72;CL:0000763,1.27e-12,108;CL:0000049,1.27e-12,108;CL:0002031,3.43e-08,120;CL:0002087,1.21e-07,115;CL:0000738,3.32e-07,136;CL:0000197,3.49e-07,6;CL:0000098,3.49e-07,6;CL:0002167,3.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.09e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.59e-12!80;UBERON:0004765!5.74e-11!101;UBERON:0001434!5.74e-11!101;UBERON:0001474!1.05e-10!86;UBERON:0001737!2.25e-08!9;UBERON:0002204!2.35e-07!167;UBERON:0002405!2.36e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.51e-16;9!UBERON:0001557;2.51e-16;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.48e-18,76;UBERON:0004765,1.16e-16,90;UBERON:0001737,2.42e-16,9;UBERON:0001474,6.74e-16,82;UBERON:0001434,7.01e-14,100;UBERON:0002405,9.73e-14,93;UBERON:0002390,1.21e-11,98;UBERON:0003061,1.21e-11,98;UBERON:0002193,2.01e-10,108;UBERON:0002204,2.49e-10,167;UBERON:0003081,3.63e-08,203 | |||
|phase1_expression=0,0,0.140954404095971,0,3.5756887554183,0.872338524100369,0,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0,0.123766352960047,3.64537113300707,14.1188280754873,13.2592796165275,23.3699228923959,7.3189919818576,0,6.12002073732759,0,0,0,0.376627918784408,1.22261449196722,0.821005894499457,1.10195093839151,0,0,0.928896739896456,0,0,0,0,0,0.587200878669695,0,0,0.434021741431704,0,0.32389366601898,0,3.92575244704825,4.91238726795452,0.727752183563449,6.97287110717054,4.93401465626191,1.54853185447552,3.16461631554365,3.33008918487831,4.25668013799453,2.06847408441971,3.87290810150296,1.35426486594342,5.64727018627814,2.45615535052061,2.69668181334102,5.50951006267625,2.24650318953266,5.11469700639233,1.31940520074686,3.39088217956774,2.55734850319616,5.5139755339431,5.10646702222026,3.11411124497787,4.27122730936464,2.60741459210101,2.17188844705117,3.02699751316684,0.736555271975129,2.84816148696796,1.47878700418359,1.70083439972035,0.838634582033504,0.898629049171961,2.25265339262259,0.803627933485401,0,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0.501559486172034,0,0.946895611469467,0,2.67385096524417,0.589211814949674,0.443067789167242,0.270803863765016,2.30564375506215,1.43065282315866,2.13769275984779,1.38175008892924,1.44901542867526,0.296573126324121,0,0,1.35971211237079,0,0,0.759059076058509,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,2.81297636055767,0,0,0.724232594804119,0,0,0.378139268656271,0,0.351339142772504,0,0,0.370784442784429,0,0,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.825354125820202,1.46296476575767,0.258416759169329,0,0,0,0,0.732186172644509,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,1.01304409331664,3.83986624358335,0,1.41867352879343,0,0,1.2333377420858,0,2.82892411346345,0.163461903113459,0,0,0.468642863667593,0.936480230490962,0,0.448346041655403,0.117434498643765,0.161872944368132,0,0,0.737005903870608,0.309977343527296,0,0.247266929278557,0,0,0,0.375355559615893,0,0.877955241761676,0.30648779579902,0.751190294532984,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0.675105328965065,0.0974370051611986,0,0,3.23292113637624,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.414644220061482,5.80337957013945,2.18986415445498,0,0,0,0,0,10.4109984035063,9.6093273344518,7.47134192638794,9.26469370952109,10.0224544282507,5.93176547777742,8.08987848960986,8.63374446551523,13.0814033361773,0,0,0,0,0,0,0,0,0.368965315629341,1.71567810298526,0,0,0.502644862058154,0.648119116109707,0.325808305310325,5.19967392639789,0,0.34779121492523,0.587043471179108,0.144366447761074,0.462985512576611,2.28304982681518,0,0,0.492434012174795,0,0.445893486866185,0,1.6798212819886,2.55195175036296,0.179117045405697,0.290633938513962,1.15014803749563,0,0.088048434013226,0.207328115540772,0,0,0.507983154337352,0,0,0,0.205654985406647,1.8020583470635,1.71495859578347,0,0,0.07333828582095,0,0,2.535908257668,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0,0.791951872933429,0,0,0.599837947092342,3.64871341923571,2.00902836572851,10.5416969741516,0,0,2.85273810081437,0.579125226670317,0.61642896765115,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,7.07100929204744,10.1704523614382,5.20417969611984,2.92853537481783,0,0,0,0,0.184369168541703,0.60818530127658,0,0.343143423810856,0.206768026122887,0,0.106727557803444,0,0,0.907170879989041,0,3.52962538562544,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,6.2753604368378,0.120859449591622,0.601519410909855,0.736647911487171,0.34444334449382,0.182091168006717,1.31124414959424,0,0.308061348417659,0,1.46139224653261,0.105551628892876,0,1.19065593693561,0.215915916102139,0,0,0,0.254876273045038,0,0.671624264166535,0.657779629937804,0,0,0,0,0,0.27470839445503,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0.107420244868274,0,0.767039646744908,0,0,0.576570202095319,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0.353437207037059,0,0,0,0,0.731140468893853,0,0,0.565621727814851,0,0,0,0,0,0.655894752046633,0.202910376962704,1.8589409885985,0,1.29070216983646,1.3754865741837,0,0,0.844430541190656,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0.213425530045242,0,0.199579371432817,0,0,1.29848776109822,0,0.228234679033192,0.313359791546046,0,3.04725200042886,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,2.97501246323581,0,0,0,0,0.242721043499027,0,0,3.34242278632766,0.890894042497916,0.307160702099232,11.9297717731956,0.281338832821026,0,0.988823245360557,0,0.19924798825107,0.276283915531148,0,0.306806047506464,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0.455173793141999,0,0,0,0,0,2.65722415744152,0,3.05163472634166,0,1.18219047581419,0,0,0,0,0,0,0.0897576444097721,0.217294743844016,1.91400695839152,1.74035427463538,0,0,0.31396051279005,0.166211681900156,0,0.19606253431774,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0.468528891450678,0.182454789215666,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.65780385377567,0.656923656425674,0.0969890164884194,0,0.90392296312213,0.274083849293502,0.397429223405979,0.126621591911757,0,0,0.213452994739353,0,0.432271251462318,0,0.171594997861965,0,0,0,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0.945398187686684,0.988990300573997,0.876246070104404,0.196854963029498,0.0846733320657845,0.795229689809303,0.136203406111576,6.10861964167073,5.77665633708382,14.1249714929923,2.249738915515,2.32140586367385,0,0,0.0788057072991982,0,0,0.896436696664224,0,1.42939065274673,0,0.5085370753095,0.542999601753713,0,0,0,0.082092520749339,0.681552087141687,0.339936274560377,0.293104467356165,0,0.775697738169303,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0,0.992332043623902,1.58089305518355,0,0,0,0.2506898940227,0,0,0,0,3.17268288745104,0.250381861413,3.44045517414043,0,0,0.138348634936231,0.249960815924213,0,0,0.705797459094515,0,0.144921028610825,0.149254802886874,0,1.10961172300523,0.189403005275089,0,8.89811221596536,0.228840068396924,0.151230923763239,0.15543720058278,0,0.159296767163702,7.64665290678128,0,9.12353657249882,0,10.9566462980464,0.150257608997218,21.7058970936213,0.406870733204662,0,0.107410557042488,5.56840511854192,12.3409725496571,0.800055529326307,2.40376993627955,4.71449284272287,0,0,0,0,0.226705925512272,0.463044948647668,0.489473409012935,0.179088841081487,0,0.219284049578707,0.176689145945881,0.192914038270915,1.18259708457151,0.512483037175893,0.690860683462397,0,0,1.36402216187572,1.59437808376036,0,0,0.983091635014877,0.211312123358627,0.39997479170986,0,0,0,0,1.95831310807222,0.622077260032973,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.495743057036009,0,0,0,0,0.352675943690684,0,0,2.8339315265117,0.159633859057151,0.41023272848151,0.756215088665154,0,0,0,0,0,0,0.231051332300676,0,0,0,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,3.90539049306924,0,0.126831620387814,0,0,0,0,0,0,0,1.82089681270989,0,0.0887023701626388,0.576169937778896,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0.215927591218621,0.9555033757741,0.0714765441766563,0,0.23248285073625,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,4.96330217062912,4.77769469488717,0.223710863595585,0,0.243835849964539,1.29485767437579,0,1.1598144313382,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0.245148321753905,0,1.76677620403451,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0.378499274505237,0.109265571963696,0.506794004045748,0.305966489225945,0,0.0918948995348449,0.50141507858475,0,0,0.829169439458779,0,0,0,0,0.0620747142958579,0.224263725161227,0.0636471582781649,0.202117188958219,0.653150243690884,0.684466602170562,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.641136984606466 | |||
|short_description=p8@GAPDH | |||
}} |
Revision as of 11:41, 11 January 2014
Short description: | p8@GAPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GAPDH_5end |
Coexpression cluster: | NA |
Association with transcript: | -325bp_to_uc001qox.1_5end |
EntrezGene: | GAPDH |
HGNC: | 4141 |
UniProt: | Q5ZEY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.16e-29 | 48 |
phagocyte | 2.16e-29 | 48 |
classical monocyte | 3.37e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.37e-28 | 42 |
macrophage dendritic cell progenitor | 2.75e-23 | 61 |
monopoietic cell | 2.35e-21 | 59 |
monocyte | 2.35e-21 | 59 |
monoblast | 2.35e-21 | 59 |
promonocyte | 2.35e-21 | 59 |
granulocyte monocyte progenitor cell | 2.99e-20 | 67 |
myeloid lineage restricted progenitor cell | 4.87e-18 | 66 |
myeloid leukocyte | 1.00e-15 | 72 |
myeloid cell | 1.27e-12 | 108 |
common myeloid progenitor | 1.27e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 3.43e-08 | 120 |
nongranular leukocyte | 1.21e-07 | 115 |
leukocyte | 3.32e-07 | 136 |
receptor cell | 3.49e-07 | 6 |
sensory epithelial cell | 3.49e-07 | 6 |
olfactory epithelial cell | 3.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.48e-18 | 76 |
skeletal element | 1.16e-16 | 90 |
larynx | 2.42e-16 | 9 |
bone element | 6.74e-16 | 82 |
skeletal system | 7.01e-14 | 100 |
immune system | 9.73e-14 | 93 |
hematopoietic system | 1.21e-11 | 98 |
blood island | 1.21e-11 | 98 |
hemolymphoid system | 2.01e-10 | 108 |
musculoskeletal system | 2.49e-10 | 167 |
lateral plate mesoderm | 3.63e-08 | 203 |