FFCP PHASE1:Hg19::chr13:60840171..60840179,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:60840171..60840179,+ | |||
|id=chr13:60840171..60840179,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.41e-30!42;CL:0000860!5.49e-29!45;CL:0000766!3.11e-22!76;CL:0002194!4.57e-22!63;CL:0000576!4.57e-22!63;CL:0000040!4.57e-22!63;CL:0000559!4.57e-22!63;CL:0000839!6.80e-22!70;CL:0002009!8.64e-21!65;CL:0000557!1.94e-20!71;CL:0000763!6.05e-14!112;CL:0000049!6.05e-14!112;CL:0002031!3.89e-13!124;CL:0000738!2.20e-12!140;CL:0002087!4.11e-12!119;CL:0002032!3.92e-10!165;CL:0000837!3.92e-10!165;CL:0000037!3.23e-09!172;CL:0000566!3.23e-09!172;CL:0000988!6.07e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-42;33!CL:0002057;1.27e-42;33!CL:0000473;4.25e-36;39!CL:0000234;4.25e-36;39!CL:0000576;4.24e-26;48!CL:0000766;2.32e-18;69!CL:0000763;1.30e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.08e-50,48;CL:0000234,1.08e-50,48;CL:0000860,4.22e-49,42;CL:0002057,4.22e-49,42;CL:0002194,4.60e-38,59;CL:0000576,4.60e-38,59;CL:0000040,4.60e-38,59;CL:0000559,4.60e-38,59;CL:0002009,1.94e-36,61;CL:0000766,2.26e-36,72;CL:0000839,1.07e-34,66;CL:0000557,5.30e-34,67;CL:0000763,3.17e-21,108;CL:0000049,3.17e-21,108;CL:0000738,3.53e-16,136;CL:0002087,4.91e-16,115;CL:0002031,7.41e-16,120;CL:0002032,8.50e-12,161;CL:0000837,8.50e-12,161;CL:0000037,7.99e-11,168;CL:0000988,1.07e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-35;42!CL:0000049;4.96e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.42e-19!80;UBERON:0001474!1.54e-19!86;UBERON:0004765!3.00e-17!101;UBERON:0001434!3.00e-17!101;UBERON:0002390!5.89e-13!102;UBERON:0003061!5.89e-13!102;UBERON:0002405!1.28e-12!115;UBERON:0002193!5.71e-12!112;UBERON:0001737!3.99e-09!9;UBERON:0002204!8.09e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.10e-17;9!UBERON:0001557;4.10e-17;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.42e-30,76;UBERON:0001474,1.86e-27,82;UBERON:0004765,2.62e-27,90;UBERON:0001434,4.76e-26,100;UBERON:0002405,1.36e-25,93;UBERON:0002390,3.17e-22,98;UBERON:0003061,3.17e-22,98;UBERON:0002193,2.48e-20,108;UBERON:0001737,2.89e-17,9;UBERON:0002204,5.20e-13,167;UBERON:0003081,4.43e-09,203;UBERON:0001557,1.53e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,1.96682138424452,0,2.01260960310899,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0.217010870715852,0.671746422719773,0,0,1.30858414901608,1.88937971844405,1.94067248950253,2.55671940596253,1.6446715520873,1.23882548358041,4.60307827715441,3.07392847834921,3.07426898855161,1.72372840368309,1.29096936716765,1.35426486594342,1.88242339542605,0.818718450173537,3.82029923556644,6.73384563215986,1.60464513538047,2.55734850319616,3.29851300186716,1.99463657621632,3.83602275479425,4.35313857942876,1.13477044938228,3.73693349397345,2.51248665256743,6.25779502104242,4.56096573880745,9.6863920421339,1.47311054395026,12.9749578850763,1.69004229049553,3.4016687994407,3.14487968262564,2.2465726229299,3.45406853535464,0.964353520182481,0.285012743741249,2.38700012638908,2.00930569141097,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0,0,0,0.560508562981536,1.31692042387539,0,0,0,1.5046784585161,0.32592226663359,0,0,2.67385096524417,2.06224135232386,0.664601683750863,2.43723477388514,3.84273959177025,4.55207716459574,5.59088875652499,2.21080014228679,0.869409257205157,0.741432815810302,1.33770414044857,3.1360657141493,1.35971211237079,1.14966148080576,0.34362744548263,1.26509846009751,0.637130828648193,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0,1.31780417436063,0,0,0,0,1.19168262731897,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0,1.35214253015937,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.843881661206331,0,0,0,0.969876340912871,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,5.32380600179297,3.87744787179634,2.6511213287183,7.83087206399997,3.05031221729369,2.84724742933316,3.7752766284846,3.92442930250692,3.07797725557112,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0.703702806881416,0.0925884451585296,0,0,0,1.15930404975077,0.469634776943287,0.144366447761074,3.24089858803628,0.951270761172991,0,0.858486162094873,0,0.468008530278475,0,0,16.1262843070905,8.3647307373008,0,0,0,0,1.49682337822484,0.414656231081544,0,0.50496973370552,5.77830838058738,0.381988425558278,0,0,0,12.6144084294445,51.7345843061347,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.399891964728228,10.9461402577071,9.04062764577828,14.7583757638122,0,0,0,0.144781306667579,0,0,0,0,0.431255149719035,0,0,0,0,0,5.74144876487847,0.749007023947182,0,0,0.12269149171914,0,0,1.45579603071565,1.96271887676878,1.41932173530541,0.819989904948992,0,0,0,0,0,0.0868836144680828,0.587403472388222,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,1.23213432070436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55511817856982,0,0.136499911407986,0,0,0,0,3.5076070820301,0,0,0,0,0,0.573645408816206,0.589494246078727,0,0,2.32218398827431,0,0,0,0,0,0,0.564862804660675,0.86101074534246,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0,0,0.343505344755765,0,0,0,0,0,0,0.811367035427949,0,0,0,0.293016358543788,0,0,0,31.9917609548505,9.79983446747707,0.614321404198464,1.9882952955326,0,0.222617410045812,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0.32681539055697,0,0.0769502585037971,0.227884111694002,0.23056390438806,0.359030577639089,0.54323685961004,33.1761206121196,8.79336896657878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.52418000472609,0.171986032471617,0.0967563312890851,0,0.246346371159628,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,1.36885967914362,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,0,0,0.399358000997982,0,0,0,0.360299883542404,0,0.157566364614447,0,0,0,0.0846733320657845,3.18091875923721,0,0.321506296930038,0.825236619583403,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,1.55139547633861,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,1.95242023843141,0,2.29363678276028,0,0.124192805882767,0,0,0,0.285465333544967,1.88212655758537,0,0.144921028610825,0,0,0,0,0.251567901752575,81.8626323868813,0,0,0.15543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| |||
|short_description=p@chr13:60840171..60840179,+ | |||
}} |
Revision as of 17:56, 11 January 2014
Short description: | p@chr13:60840171..60840179, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:60840171..60840179, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.08e-50 | 48 |
phagocyte | 1.08e-50 | 48 |
classical monocyte | 4.22e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.22e-49 | 42 |
monopoietic cell | 4.60e-38 | 59 |
monocyte | 4.60e-38 | 59 |
monoblast | 4.60e-38 | 59 |
promonocyte | 4.60e-38 | 59 |
macrophage dendritic cell progenitor | 1.94e-36 | 61 |
myeloid leukocyte | 2.26e-36 | 72 |
myeloid lineage restricted progenitor cell | 1.07e-34 | 66 |
granulocyte monocyte progenitor cell | 5.30e-34 | 67 |
myeloid cell | 3.17e-21 | 108 |
common myeloid progenitor | 3.17e-21 | 108 |
leukocyte | 3.53e-16 | 136 |
nongranular leukocyte | 4.91e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 7.41e-16 | 120 |
hematopoietic oligopotent progenitor cell | 8.50e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.50e-12 | 161 |
hematopoietic stem cell | 7.99e-11 | 168 |
hematopoietic cell | 1.07e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.42e-30 | 76 |
bone element | 1.86e-27 | 82 |
skeletal element | 2.62e-27 | 90 |
skeletal system | 4.76e-26 | 100 |
immune system | 1.36e-25 | 93 |
hematopoietic system | 3.17e-22 | 98 |
blood island | 3.17e-22 | 98 |
hemolymphoid system | 2.48e-20 | 108 |
larynx | 2.89e-17 | 9 |
musculoskeletal system | 5.20e-13 | 167 |
lateral plate mesoderm | 4.43e-09 | 203 |
upper respiratory tract | 1.53e-08 | 19 |