FFCP PHASE1:Hg19::chr14:100841771..100841782,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12729 | |||
|TSSclassifier=strong | |||
|UniProt=G3V3R3 | |||
|association_with_transcript=21bp_to_ENST00000556295_5end | |||
|description=CAGE_peak_7_at_WARS_5end | |||
|id=chr14:100841771..100841782,- | |||
|ontology_enrichment_celltype=CL:0002057!5.97e-16!42;CL:0000860!1.02e-14!45;CL:0000766!1.20e-10!76;CL:0002194!3.20e-10!63;CL:0000576!3.20e-10!63;CL:0000040!3.20e-10!63;CL:0000559!3.20e-10!63;CL:0002009!1.45e-09!65;CL:0000839!2.24e-09!70;CL:0000557!6.19e-09!71;CL:0002139!1.29e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.88e-13;33!CL:0002057;1.88e-13;33!CL:0000473;3.84e-10;39!CL:0000234;3.84e-10;39!CL:0000576;2.39e-09;48!CL:0002139;3.26e-09;24!CL:0000766;3.29e-08;69!CL:0002138;2.53e-07;6!CL:0000115;5.64e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-18,42;CL:0002057,1.38e-18,42;CL:0000473,3.73e-17,48;CL:0000234,3.73e-17,48;CL:0000766,5.90e-14,72;CL:0002194,2.20e-13,59;CL:0000576,2.20e-13,59;CL:0000040,2.20e-13,59;CL:0000559,2.20e-13,59;CL:0002009,1.69e-12,61;CL:0000839,3.26e-12,66;CL:0000557,8.00e-12,67;CL:0002139,2.51e-09,24;CL:0000115,1.88e-08,36;CL:0000763,2.36e-08,108;CL:0000049,2.36e-08,108;CL:0005020,2.52e-07,6;CL:0002138,2.52e-07,6;CL:0005022,2.52e-07,6;CL:0002078,2.57e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;7.92e-14;42!CL:0005022;2.53e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.92e-08!216;UBERON:0001474!9.00e-08!86;UBERON:0002193!1.82e-07!112;UBERON:0002371!1.95e-07!80;UBERON:0002405!9.37e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.63e-09;9!UBERON:0001557;7.63e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.39e-12,203;UBERON:0002405,3.05e-10,93;UBERON:0000926,4.31e-10,315;UBERON:0004120,4.31e-10,315;UBERON:0006603,4.31e-10,315;UBERON:0002193,7.44e-10,108;UBERON:0002371,1.17e-09,76;UBERON:0001474,1.91e-09,82;UBERON:0001737,9.02e-09,9;UBERON:0002390,6.64e-08,98;UBERON:0003061,6.64e-08,98;UBERON:0004765,1.94e-07,90;UBERON:0001434,6.41e-07,100 | |||
|phase1_expression=0.181678379270557,0.428201047781966,1.83240725324762,0,0.446961094427288,0,7.59899634504932,0.631719873426831,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,1.56727360739044,0,0.273748850145768,0,2.06316195519468,1.23150884174919,1.65292640758726,3.14691421479123,1.53531759238885,2.78669021968937,0,0,0,0.232401601740905,0.284338464974843,0,2.76997704265939,1.20326668482085,2.17010870715852,0,0,0,2.76256653681173,2.64513160582167,1.69808842831471,4.41615170120801,6.98985409637104,9.60089749774821,0.863077176966451,1.0246428261164,2.36482229888585,6.89491361473237,10.3277549373412,10.8341189275473,4.51781614902251,7.09555990150399,5.61808711112712,10.4068523406107,14.1208771913481,25.5734850319616,0.329851300186716,1.79517291859469,0.426224750532694,8.9964863974861,7.94339314567596,6.85104473895132,1.25624332628372,1.0429658368404,1.08594422352558,5.44859552370032,12.8897172595648,8.22802207346299,3.38008458099107,2.97646019951061,1.25795187305026,0.673971786878971,1.35159203557356,0.32145117339416,3.99017841237748,3.38158351238453,4.01861138282195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,4.85877735005415,1.0843174571537,7.52006865953834,11.5877215168659,0,0.486634870302636,0,0,0.263504357079378,0.523916301990851,0,0,2.27183175558278,0.870648686496336,3.32394901297163,0,0.571994910780128,0,1.59009925893364,1.72046919021225,2.42998351125316,2.26123176769604,6.71199097935849,2.20094433552054,1.67195973229448,20.6733407335463,43.0477177850919,44.5178414977011,5.23678112241891,14.4451700086517,16.8402819708237,0.367663080345869,0.81014194788176,4.73288559905623,1.12264686313085,1.80178368773316,0,0.949265659568129,0.366403487860815,0,3.87780264148325,0.436094052142534,5.4666914686485,2.40597972162702,5.29636723252875,4.30254931123221,1.77334191099179,2.24271040056923,0,3.94668077467456,0.311211035399766,1.48181739276657,0.163461903113459,0.302714855289863,0.576175924479999,3.04617861383936,0,0,0,0,0,0,0,0.245668634623536,1.03325781175765,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.919463387397059,1.95309476578576,0.453728732640084,0.89694817844431,1.70845911054854,1.48352330811693,0.900273288253207,0.721367704669072,3.60696756063881,3.35010341396862,2.53164498361899,0.292311015483596,1.00973509697646,0.644349290496095,0.646584227275248,1.42003837006646,0.604512589365842,0.169560592310488,0,0,0,0,0,0.116193942869518,0.725627385107593,0.252320850875628,0,0,0,0,0,1.44375896333917,7.92655560266954,5.22612539242115,6.26628677697053,8.60292987312673,9.58669554006587,7.59265981155509,6.74156540800822,6.67152981426177,7.31019598198142,8.11971000087113,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0.857839051492628,0,0,0,0,5.2129328849652,0,0,0.695582429850461,4.81375646366869,18.6232717611785,8.7967247389556,12.9372823519527,0,0,0.246217006087397,10.9982004615442,3.86441021950693,0,0,0,0.0895585227028483,0,0,56.1636091201376,1.40877494421162,0.829312462163088,0,0,1.33345578013555,1.90994212779139,0,0,0.616964956219941,1.8020583470635,2.85826432630578,0.112131084345361,0.43596006883328,0,1.93907573636667,0,0,3.45719551560332,2.08014873822732,0,0,0.266422179016099,2.43062589218851,0.542621605391443,0,0,1.06617584622764,0,0.301439377059586,1.74306691720059,0.299918973546171,0,0.502257091432126,0,3.83399768786532,2.29723871668228,0,0.579125226670317,0.205476322550383,0,1.2329365839288,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,2.48649308061621,0.12269149171914,0.500170521059677,0.542530047399471,6.86303843051664,3.56857977594324,3.78485796081443,1.40569697991256,2.70851489754947,6.82222512167955,1.03473071292505,0,0.921845842708516,1.73767228936166,0.195801157462741,1.37257369524342,1.6541442089831,1.2942852049117,1.06727557803444,0,0,0.30239029332968,1.24053903909388,3.6830873589135,1.68396056659844,5.12556597022804,2.55853624533352,2.0911009748669,0,0,1.24293207719189,0.0821271560138091,1.55776328755086,0,0.120859449591622,0,0.920809889358963,14.007362676082,1.63882051206045,12.5879438361047,0,0.0770153371044148,0,0,0.105551628892876,3.4120015221269,3.06168669497728,3.88648648983851,7.71136263451447,0,0,0.254876273045038,1.66215201785745,0,0.219259876645935,0,0.512900250232778,0,1.30151357865721,8.65544497840867,0,0.082509499920588,0,0,3.21367859688319,2.03008508413456,0.154048617114644,0,0.137836572484531,0.859361958946189,0.145016693914229,0.170453254832202,3.38321735457602,0.826424576804891,0.576570202095319,0,2.2254711788221,1.39453664789186,1.88887408098384,0,1.23213432070436,0,0,0,0.572499546967965,1.116475108079,0.632758849437452,0.762520775695299,0.255897791311334,2.56763392820352,1.27281299170375,0,1.79872457583315,1.37268514868027,0.942499218765491,0.606547444719948,3.17020642346017,0,0,4.87426979262569,0,1.50149902548784,27.1498429351128,0,0,0.66343897524122,1.31535265576129,0,0.655894752046633,0.202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| |||
|short_description=p7@WARS | |||
}} |
Revision as of 21:55, 11 January 2014
Short description: | p7@WARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_WARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000556295_5end |
EntrezGene: | WARS |
HGNC: | 12729 |
UniProt: | G3V3R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-18 | 42 |
defensive cell | 3.73e-17 | 48 |
phagocyte | 3.73e-17 | 48 |
myeloid leukocyte | 5.90e-14 | 72 |
monopoietic cell | 2.20e-13 | 59 |
monocyte | 2.20e-13 | 59 |
monoblast | 2.20e-13 | 59 |
promonocyte | 2.20e-13 | 59 |
macrophage dendritic cell progenitor | 1.69e-12 | 61 |
myeloid lineage restricted progenitor cell | 3.26e-12 | 66 |
granulocyte monocyte progenitor cell | 8.00e-12 | 67 |
endothelial cell of vascular tree | 2.51e-09 | 24 |
endothelial cell | 1.88e-08 | 36 |
myeloid cell | 2.36e-08 | 108 |
common myeloid progenitor | 2.36e-08 | 108 |
lymphangioblast | 2.52e-07 | 6 |
endothelial cell of lymphatic vessel | 2.52e-07 | 6 |
vascular lymphangioblast | 2.52e-07 | 6 |
meso-epithelial cell | 2.57e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.39e-12 | 203 |
immune system | 3.05e-10 | 93 |
mesoderm | 4.31e-10 | 315 |
mesoderm-derived structure | 4.31e-10 | 315 |
presumptive mesoderm | 4.31e-10 | 315 |
hemolymphoid system | 7.44e-10 | 108 |
bone marrow | 1.17e-09 | 76 |
bone element | 1.91e-09 | 82 |
larynx | 9.02e-09 | 9 |
hematopoietic system | 6.64e-08 | 98 |
blood island | 6.64e-08 | 98 |
skeletal element | 1.94e-07 | 90 |
skeletal system | 6.41e-07 | 100 |