FFCP PHASE1:Hg19::chr14:35872926..35872951,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4792 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7797 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-290bp_to_ENST00000556664_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_NFKBIA_5end | |||
|id=chr14:35872926..35872951,- | |||
|ontology_enrichment_celltype=CL:0000766!1.11e-24!76;CL:0002057!2.89e-24!42;CL:0000860!4.74e-24!45;CL:0000738!4.21e-23!140;CL:0000557!3.55e-20!71;CL:0002009!4.45e-20!65;CL:0002194!6.75e-19!63;CL:0000576!6.75e-19!63;CL:0000040!6.75e-19!63;CL:0000559!6.75e-19!63;CL:0000839!3.30e-18!70;CL:0002087!1.24e-16!119;CL:0002031!3.63e-16!124;CL:0000037!4.25e-12!172;CL:0000566!4.25e-12!172;CL:0000988!8.85e-12!182;CL:0002032!3.11e-10!165;CL:0000837!3.11e-10!165;CL:0000763!4.20e-10!112;CL:0000049!4.20e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.59e-29;33!CL:0002057;3.59e-29;33!CL:0000473;3.25e-24;39!CL:0000234;3.25e-24;39!CL:0000576;6.15e-19;48!CL:0000766;9.21e-17;69!CL:0000094;9.30e-10;8!CL:0002087;2.14e-08;104!CL:0000738;3.09e-08;136!CL:0000081;6.41e-08;11!CL:0002393;1.99e-07;6!CL:0002397;1.99e-07;6!CL:0000763;5.56e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.61e-36,42;CL:0002057,2.61e-36,42;CL:0000473,2.68e-36,48;CL:0000234,2.68e-36,48;CL:0000766,1.38e-35,72;CL:0000738,2.04e-34,136;CL:0000557,4.46e-29,67;CL:0002009,1.08e-28,61;CL:0002194,8.04e-27,59;CL:0000576,8.04e-27,59;CL:0000040,8.04e-27,59;CL:0000559,8.04e-27,59;CL:0000839,1.55e-26,66;CL:0002031,6.24e-25,120;CL:0002087,1.13e-24,115;CL:0000037,4.51e-22,168;CL:0000988,6.61e-21,177;CL:0002032,3.62e-19,161;CL:0000837,3.62e-19,161;CL:0000763,1.07e-18,108;CL:0000049,1.07e-18,108;CL:0000094,1.02e-09,8;CL:0000081,7.85e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;7.38e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.69e-17!112;UBERON:0002390!5.04e-17!102;UBERON:0003061!5.04e-17!102;UBERON:0002371!4.92e-15!80;UBERON:0002405!3.92e-14!115;UBERON:0001474!1.36e-12!86;UBERON:0004765!1.50e-10!101;UBERON:0001434!1.50e-10!101;UBERON:0003081!3.11e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.47e-23,76;UBERON:0002193,7.86e-23,108;UBERON:0002390,8.20e-23,98;UBERON:0003061,8.20e-23,98;UBERON:0002405,1.66e-20,93;UBERON:0001474,2.98e-20,82;UBERON:0004765,2.36e-19,90;UBERON:0001434,2.58e-17,100;UBERON:0003081,2.48e-12,203;UBERON:0002204,2.38e-09,167 | |||
|phase1_expression=0,0.856402095563933,0,0,0.893922188854576,1.74467704820074,0,0,0.522371256399677,0,3.48900583986214,0,0,0.123766352960047,1.32558950291166,2.01697543935533,3.61616716814386,2.19093027116212,1.95173119516203,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,1.52826811495903,1.55991119954897,1.57421562627358,5.11373559903575,4.22212337906934,7.43117391917165,0.919421224478927,1.8072355126695,2.21852406100073,0,0,0.587200878669695,29.9157520607214,65.7785787702065,44.7042393674655,0.895661896959697,0.647787332037959,0.515151135268373,4.50734540216651,1.88937971844405,3.15359279544161,23.7077617643798,19.7360586250476,14.865905802965,24.4538533473828,19.2120529896825,16.0807916324238,54.1250718756491,38.0835963314457,35.2108865145289,18.4477492751753,9.5517152520246,9.88783331558372,67.3384563215986,24.7115350848592,64.5730497057032,3.95821560224059,4.9865914405408,2.55734850319616,57.171220009831,41.9865066271443,44.8432019276814,6.53246529667532,9.90817544998383,7.38442071997397,46.6157617027694,32.4084319669057,31.9627011315293,5.0701268714866,7.86635909870661,4.19317291016752,2.80821577866238,4.50530678524519,1.44653028027372,0.285012743741249,2.78483348078726,0.91332076882317,0,0,0.889509253863555,0.853460445133014,0,0,1.32208974556972,0,5.69212969109448,9.98303221930596,8.79228424688026,5.28685314316103,3.92355994087075,0.263384084775077,2.55722701147983,17.6854843237124,5.96244347098577,0.167186495390678,0.651844533267181,0,1.94826728407911,0.111410456885174,0.294605907474837,0.664601683750863,0.270803863765016,0.512365278902701,0.260118695119756,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0,0,0.903450714466637,0.127986611154418,0,0.236777252044017,0,5.64498881029251,15.5115313554434,6.51709817472595,0,0.670700859703636,0,0.722878304769133,1.00267582127178,0.289693037921647,0,1.45990461090791,0.189069634328136,0.221729397462564,0.43917392846563,0.654895377488563,0.364295288292542,0.370784442784429,0,0.348259474598534,0.26591592103773,3.57735936458013,2.28797964312051,2.60020250930695,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0.488124115096339,0.735326160691737,0,0,0.44905874525234,0,0,0,0,89.610683856523,131.845289810431,0,0,0.12663051166458,0,0.573673241497627,0.354668382198357,0.560677600142307,0,0.74000264525148,0,1.75123873690594,0.653847612453835,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0.469737994575059,0.647491777472526,0.140450806702248,0,0.61417158655884,0.516628905878827,0,0.989067717114227,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0.901428353439581,0,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.292311015483596,0,0,0.484938170456436,0.355009592516614,0.201504196455281,0.339121184620975,0.57978255948989,0.545492241181669,0.860413786167011,0,0.132529768321485,0,0.518305275076852,0,0.36497735907583,3.12899064659632,2.57296375277154,0,1.39310378409594,0,1.30137480043828,0.337169380156203,0.964044119533928,0.661763836394364,0,0.474541238222193,0.269662616320329,0.196221465125346,1.15424147083917,2.21446636387394,1.40241773803446,0,1.47008711385542,0,0.982827216677626,0,1.32438929824395,0,0.171567810298526,0.439001141634502,0,0.301586917234893,0.740707561268237,0,0,1.44331342025273,0.463721619900307,0,2.88732895522148,7.87075371380238,3.99533719692656,0.790204397959275,0,0,0.468008530278475,1.0404181360211,0.93733833986777,0.16798212819886,0.283550194484773,0.447792613514241,0.871901815541886,0,0.985326475791887,0,8.08579650609011,10.5207565994382,6.18587923789262,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,1.690605505112,0,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0.791951872933429,1.20575750823834,0,0.399891964728228,2.43247561282381,2.51128545716063,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0,0.112085143993527,4.13764596424047,18.5439714379185,11.8075593377368,0,0,0.773288812777695,0,1.27587750330633,56.1755267960387,74.7903648010062,55.1172632869927,1.59498939234882,2.00068208423871,0.271265023699736,0.415941723061614,1.60586089917446,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.60818530127658,0.195801157462741,0,3.3082884179662,43.358554364542,19.4244155202269,0.909382714338778,0,0.907170879989041,0,0,0.280660094433074,0.128139149255701,0,0,0,0.771048469013278,0.532685175939381,0.0821271560138091,1.55776328755086,0.464841513839837,0.604297247958111,1.40354529212299,0.184161977871793,0,0.546273504020151,0.393373244878272,0.451199612907412,0.385076685522074,0,0,0.844413031143006,1.13733384070897,0.680374821106063,0.431831832204279,4.62681758070868,0.270946437543853,0.501689773854853,0.254876273045038,2.49322802678617,0.223874754722178,0,0,0,0,0,1.64865618636356,0.732555718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| |||
|short_description=p4@NFKBIA | |||
}} |
Revision as of 19:45, 11 January 2014
Short description: | p4@NFKBIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFKBIA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -290bp_to_ENST00000556664_5end |
EntrezGene: | NFKBIA |
HGNC: | 7797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.61e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.61e-36 | 42 |
defensive cell | 2.68e-36 | 48 |
phagocyte | 2.68e-36 | 48 |
myeloid leukocyte | 1.38e-35 | 72 |
leukocyte | 2.04e-34 | 136 |
granulocyte monocyte progenitor cell | 4.46e-29 | 67 |
macrophage dendritic cell progenitor | 1.08e-28 | 61 |
monopoietic cell | 8.04e-27 | 59 |
monocyte | 8.04e-27 | 59 |
monoblast | 8.04e-27 | 59 |
promonocyte | 8.04e-27 | 59 |
myeloid lineage restricted progenitor cell | 1.55e-26 | 66 |
hematopoietic lineage restricted progenitor cell | 6.24e-25 | 120 |
nongranular leukocyte | 1.13e-24 | 115 |
hematopoietic stem cell | 4.51e-22 | 168 |
hematopoietic cell | 6.61e-21 | 177 |
hematopoietic oligopotent progenitor cell | 3.62e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.62e-19 | 161 |
myeloid cell | 1.07e-18 | 108 |
common myeloid progenitor | 1.07e-18 | 108 |
granulocyte | 1.02e-09 | 8 |
blood cell | 7.85e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.47e-23 | 76 |
hemolymphoid system | 7.86e-23 | 108 |
hematopoietic system | 8.20e-23 | 98 |
blood island | 8.20e-23 | 98 |
immune system | 1.66e-20 | 93 |
bone element | 2.98e-20 | 82 |
skeletal element | 2.36e-19 | 90 |
skeletal system | 2.58e-17 | 100 |
lateral plate mesoderm | 2.48e-12 | 203 |
musculoskeletal system | 2.38e-09 | 167 |