FFCP PHASE1:Hg19::chr16:2837585..2837602,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:2837585..2837602,- | |||
|id=chr16:2837585..2837602,- | |||
|ontology_enrichment_celltype=CL:0002586!5.55e-17!3;CL:0000775!7.24e-17!3;CL:0000149!7.30e-13!4;CL:0002549!3.46e-11!2;CL:0000094!5.08e-11!8;CL:0000081!4.98e-08!11;CL:0002605!1.56e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.00e-33;3!CL:0000775;1.48e-33;3!CL:0000149;1.75e-25;4!CL:0000094;2.85e-22;8!CL:0000081;2.75e-16;11!CL:0000147;1.07e-07;14!CL:0000771;8.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,8.46e-34,3;CL:0000775,1.48e-33,3;CL:0000149,1.54e-25,4;CL:0000094,2.69e-22,8;CL:0000081,2.64e-16,11;CL:0000147,1.04e-07,14;CL:0000771,7.61e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.56e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.56e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.24e-22!15;UBERON:0000179!4.24e-22!15;UBERON:0000463!4.24e-22!15;UBERON:0000966!1.64e-17!5;UBERON:0005388!1.64e-17!5;UBERON:0001802!1.64e-17!5;UBERON:0001781!5.55e-17!3;UBERON:0001782!5.55e-17!3;UBERON:0005424!5.55e-17!3;UBERON:0003947!3.46e-11!2;UBERON:0005629!3.46e-11!2;UBERON:0005358!3.46e-11!2;UBERON:0001886!3.46e-11!2;UBERON:0004086!3.46e-11!2;UBERON:0005282!3.46e-11!2;UBERON:0005281!3.46e-11!2;UBERON:0002300!9.72e-08!3;UBERON:0004177!8.29e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.73e-46;15!UBERON:0000179;1.73e-46;15!UBERON:0000463;1.73e-46;15!UBERON:0000966;2.81e-35;5!UBERON:0005388;2.81e-35;5!UBERON:0001802;2.81e-35;5!UBERON:0001781;1.00e-33;3!UBERON:0001782;1.00e-33;3!UBERON:0002390;3.16e-20;32!UBERON:0002193;1.12e-11;42!UBERON:0007625;1.18e-09;11!UBERON:0000019;1.67e-09;19!UBERON:0000047;1.67e-09;19!UBERON:0004088;1.67e-09;19!UBERON:0010230;1.67e-09;19!UBERON:0000970;4.88e-09;20!UBERON:0002104;1.29e-08;21!UBERON:0001456;1.29e-08;21!UBERON:0000020;6.97e-08;23!UBERON:0001032;1.46e-07;24!UBERON:0004456;1.46e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.94e-46,15;UBERON:0000179,1.94e-46,15;UBERON:0000463,1.94e-46,15;UBERON:0001782,8.46e-34,3;UBERON:0005424,8.46e-34,3;UBERON:0000966,1.67e-29,6;UBERON:0005388,1.67e-29,6;UBERON:0001802,1.67e-29,6;UBERON:0001781,1.54e-25,4;UBERON:0007625,1.12e-09,11;UBERON:0000019,4.78e-09,20;UBERON:0000047,4.78e-09,20;UBERON:0010312,4.78e-09,20;UBERON:0004088,4.78e-09,20;UBERON:0010230,4.78e-09,20;UBERON:0003072,4.78e-09,20;UBERON:0004128,4.78e-09,20;UBERON:0003071,4.78e-09,20;UBERON:0000970,1.26e-08,21;UBERON:0002104,1.26e-08,21;UBERON:0001456,3.05e-08,22;UBERON:0000020,1.44e-07,24;UBERON:0001032,1.44e-07,24;UBERON:0004456,1.44e-07,24;UBERON:0007023,9.47e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,8.98808428736619,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89835287767695,1.96808787419823,7.80908147194327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08937131078603,7.64637207142375,13.1018853050057,3.57347663186684,3.29089818468955,3.24236655596359,5.40031437238115,3.96562588147135,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,2.32991899054908,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.7153612071937,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr16:2837585..2837602,- | |||
}} |
Revision as of 01:56, 12 January 2014
Short description: | p@chr16:2837585..2837602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2837585..2837602, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 8.46e-34 | 3 |
neutrophil | 1.48e-33 | 3 |
visual pigment cell | 1.54e-25 | 4 |
granulocyte | 2.69e-22 | 8 |
blood cell | 2.64e-16 | 11 |
pigment cell | 1.04e-07 | 14 |
eosinophil | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.94e-46 | 15 |
haemolymphatic fluid | 1.94e-46 | 15 |
organism substance | 1.94e-46 | 15 |
pigmented layer of retina | 8.46e-34 | 3 |
presumptive retinal pigmented epithelium | 8.46e-34 | 3 |
retina | 1.67e-29 | 6 |
photoreceptor array | 1.67e-29 | 6 |
posterior segment of eyeball | 1.67e-29 | 6 |
layer of retina | 1.54e-25 | 4 |
pigment epithelium of eye | 1.12e-09 | 11 |
camera-type eye | 4.78e-09 | 20 |
simple eye | 4.78e-09 | 20 |
immature eye | 4.78e-09 | 20 |
ocular region | 4.78e-09 | 20 |
eyeball of camera-type eye | 4.78e-09 | 20 |
optic cup | 4.78e-09 | 20 |
optic vesicle | 4.78e-09 | 20 |
eye primordium | 4.78e-09 | 20 |
eye | 1.26e-08 | 21 |
visual system | 1.26e-08 | 21 |
face | 3.05e-08 | 22 |
sense organ | 1.44e-07 | 24 |
sensory system | 1.44e-07 | 24 |
entire sense organ system | 1.44e-07 | 24 |
adult organism | 9.47e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.56e-07 | 2 |