FFCP PHASE1:Hg19::chr16:53483921..53483928,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9894 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_uc010vgw.1_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_14_at_RBL2_5end | |||
|id=chr16:53483921..53483928,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.36e-37!18;CL:0000789!1.36e-37!18;CL:0002420!1.36e-37!18;CL:0002419!1.36e-37!18;CL:0000790!1.36e-37!18;CL:0000625!7.07e-33!11;CL:0000084!6.74e-30!25;CL:0000827!6.74e-30!25;CL:0000838!1.75e-20!52;CL:0000542!5.26e-20!53;CL:0000051!5.26e-20!53;CL:0000624!9.30e-10!6;CL:0002087!4.38e-09!119;CL:0000738!9.54e-09!140 | |||
|ontology_enrichment_celltype_v019=CL:0000625;7.68e-42;11!CL:0000791;2.38e-25;18!CL:0000789;2.38e-25;18!CL:0002419;2.38e-25;18!CL:0000084;4.48e-18;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.05e-42,11;CL:0000791,1.62e-25,18;CL:0000789,1.62e-25,18;CL:0002420,1.62e-25,18;CL:0002419,1.62e-25,18;CL:0000790,1.62e-25,18;CL:0000084,3.41e-18,25;CL:0000827,3.41e-18,25;CL:0000838,2.23e-08,52;CL:0000542,3.32e-08,53;CL:0000051,3.32e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.38e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.10e-14!15;UBERON:0000179!2.10e-14!15;UBERON:0000463!2.10e-14!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-10;15!UBERON:0000179;2.20e-10;15!UBERON:0000463;2.20e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.22e-10,15;UBERON:0000179,2.22e-10,15;UBERON:0000463,2.22e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.205601498999509,2.00623794468814,0.651844533267181,0,0,0.891283655081389,0,0,0,0.384273959177026,0.260118695119756,1.47994114143309,1.10540007114339,5.79606171470105,1.63115219478266,2.40786745280742,1.04535523804977,3.96582699441482,0,1.03088233644789,1.01207876807801,1.91139248594458,2.60433381542567,4.75226022224187,0.903450714466637,1.27986611154418,4.99722906209383,3.07810427657222,1.64225599384209,0.80642697289893,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,3.0585488285695,1.13929437434833,0.476463550915578,0,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.258355639344024,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p14@RBL2 | |||
}} |
Revision as of 03:35, 12 January 2014
Short description: | p14@RBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RBL2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -47bp_to_uc010vgw.1_5end |
EntrezGene: | RBL2 |
HGNC: | 9894 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.05e-42 | 11 |
mature alpha-beta T cell | 1.62e-25 | 18 |
alpha-beta T cell | 1.62e-25 | 18 |
immature T cell | 1.62e-25 | 18 |
mature T cell | 1.62e-25 | 18 |
immature alpha-beta T cell | 1.62e-25 | 18 |
T cell | 3.41e-18 | 25 |
pro-T cell | 3.41e-18 | 25 |
lymphoid lineage restricted progenitor cell | 2.23e-08 | 52 |
lymphocyte | 3.32e-08 | 53 |
common lymphoid progenitor | 3.32e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 2.22e-10 | 15 |
haemolymphatic fluid | 2.22e-10 | 15 |
organism substance | 2.22e-10 | 15 |