FFCP PHASE1:Hg19::chr16:810728..810749,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |||
|association_with_transcript=-15bp_to_ENST00000545450,NM_005823,uc002cjt.1,uc002cju.1_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_2_at_MSLN_5end | |||
|id=chr16:810728..810749,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.67e-38!254;CL:0002076!5.04e-14!43;CL:0000077!2.89e-13!19;CL:0000223!1.21e-11!59;CL:0002251!7.68e-09!21;CL:0000076!1.81e-08!62;CL:1000449!2.32e-08!16;CL:1000507!2.17e-07!12;CL:1000494!2.17e-07!12;CL:1000497!6.12e-07!18;CL:0002518!6.12e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.05e-20;19!CL:1000507;1.57e-11;10!CL:1000494;1.57e-11;10!CL:1000449;2.42e-10;15!CL:0002681;4.32e-09;12!CL:0002584;4.32e-09;12!CL:1000497;8.85e-09;17!CL:0002518;8.85e-09;17!CL:0000349;2.78e-08;19!CL:0000150;8.64e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.44e-34,253;CL:0000077,4.33e-20,19;CL:1000507,1.20e-11,10;CL:1000494,1.20e-11,10;CL:0000076,2.77e-11,63;CL:1000449,1.86e-10,15;CL:0002681,3.95e-09,12;CL:0002584,3.95e-09,12;CL:1000497,7.05e-09,17;CL:0002518,7.05e-09,17;CL:0000349,2.94e-08,19;CL:0000150,7.11e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.76e-11;29 | |||
|ontology_enrichment_disease=DOID:305!2.07e-16!106;DOID:0050687!3.85e-12!143;DOID:162!1.36e-08!235;DOID:14566!2.42e-08!239;DOID:299!3.31e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.90e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.59e-14,106;DOID:0050687,2.84e-09,143;DOID:162,1.61e-08,235;DOID:14566,1.73e-08,239;DOID:299,1.64e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.22e-17!169;UBERON:0000925!2.22e-17!169;UBERON:0006595!2.22e-17!169;UBERON:0000464!2.54e-15!104;UBERON:0001004!7.57e-15!72;UBERON:0000466!9.76e-14!126;UBERON:0001007!2.64e-12!155;UBERON:0001555!2.64e-12!155;UBERON:0007026!2.64e-12!155;UBERON:0008947!8.88e-12!38;UBERON:0003258!8.88e-12!38;UBERON:0000065!2.84e-11!53;UBERON:0005631!8.05e-11!14;UBERON:0000158!8.05e-11!14;UBERON:0000058!3.53e-10!26;UBERON:0000077!3.74e-10!130;UBERON:0005177!6.02e-10!107;UBERON:0004921!1.11e-09!129;UBERON:0004185!1.11e-09!129;UBERON:0000080!1.84e-09!18;UBERON:0002120!1.84e-09!18;UBERON:0004875!1.84e-09!18;UBERON:0005721!1.84e-09!18;UBERON:0005754!1.84e-09!18;UBERON:0007297!1.84e-09!18;UBERON:0001041!3.17e-09!98;UBERON:0004876!3.86e-09!20;UBERON:0006555!4.93e-09!17;UBERON:0005103!4.93e-09!17;UBERON:0000083!4.93e-09!17;UBERON:0009201!4.93e-09!17;UBERON:0004819!4.93e-09!17;UBERON:0006553!4.93e-09!17;UBERON:0003074!4.93e-09!17;UBERON:0003060!4.93e-09!17;UBERON:0002553!5.76e-09!70;UBERON:0003133!1.54e-08!48;UBERON:0000062!1.63e-08!511;UBERON:0000064!1.98e-08!219;UBERON:0004211!2.32e-08!16;UBERON:0001285!2.32e-08!16;UBERON:0007684!2.32e-08!16;UBERON:0003220!2.32e-08!16;UBERON:0004208!2.32e-08!16;UBERON:0003100!3.81e-08!41;UBERON:0000072!4.72e-08!46;UBERON:0005181!5.32e-08!35;UBERON:0001737!1.05e-07!9;UBERON:0003886!1.11e-07!63;UBERON:0005178!1.71e-07!34;UBERON:0002224!1.71e-07!34;UBERON:0005156!1.81e-07!59;UBERON:0000990!1.81e-07!59;UBERON:0001851!2.11e-07!16;UBERON:0009773!2.17e-07!12;UBERON:0001231!2.17e-07!12;UBERON:0004810!2.17e-07!12;UBERON:0003887!2.28e-07!21;UBERON:0001048!3.47e-07!168;UBERON:0003134!3.75e-07!37;UBERON:0000474!3.75e-07!37;UBERON:0004175!4.10e-07!25;UBERON:0003064!5.15e-07!37;UBERON:0003124!7.21e-07!7;UBERON:0005911!8.48e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.57e-11;10!UBERON:0009773;1.57e-11;10!UBERON:0001231;1.57e-11;10!UBERON:0004810;1.57e-11;10!UBERON:0001737;7.47e-11;9!UBERON:0001557;7.47e-11;9!UBERON:0001851;8.51e-11;15!UBERON:0006555;2.42e-10;15!UBERON:0004819;2.42e-10;15!UBERON:0001285;2.42e-10;15!UBERON:0007684;2.42e-10;15!UBERON:0001225;4.32e-09;12!UBERON:0008987;4.32e-09;12!UBERON:0000065;1.24e-08;44!UBERON:0000478;3.63e-08;24!UBERON:0002294;8.70e-08;7!UBERON:0001173;8.70e-08;7!UBERON:0000072;9.18e-08;37!UBERON:0005631;1.82e-07;10!UBERON:0000158;1.82e-07;10!UBERON:0006554;2.11e-07;30!UBERON:0001008;2.11e-07;30!UBERON:0001987;6.25e-07;4!UBERON:0000353;7.73e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,7.93e-13,38;UBERON:0003258,7.93e-13,38;UBERON:0005631,2.08e-12,14;UBERON:0000158,2.08e-12,14;UBERON:0004810,1.20e-11,10;UBERON:0006555,1.82e-11,16;UBERON:0004819,1.82e-11,16;UBERON:0001737,5.91e-11,9;UBERON:0001851,7.67e-11,15;UBERON:0004119,8.96e-11,160;UBERON:0000925,8.96e-11,160;UBERON:0006595,8.96e-11,160;UBERON:0004211,1.86e-10,15;UBERON:0009773,1.86e-10,15;UBERON:0001231,1.86e-10,15;UBERON:0001285,1.86e-10,15;UBERON:0007684,1.86e-10,15;UBERON:0004208,1.86e-10,15;UBERON:0001225,3.95e-09,12;UBERON:0008987,3.95e-09,12;UBERON:0006554,2.46e-08,47;UBERON:0005177,2.74e-08,101;UBERON:0001004,3.63e-08,74;UBERON:0000478,3.85e-08,24;UBERON:0001041,4.11e-08,87;UBERON:0001008,4.81e-08,48;UBERON:0003100,6.67e-08,41;UBERON:0001007,8.48e-08,145;UBERON:0001555,8.48e-08,145;UBERON:0007026,8.48e-08,145;UBERON:0003124,8.48e-08,7;UBERON:0000065,3.27e-07,54;UBERON:0001987,5.91e-07,4;UBERON:0004340,5.91e-07,4;UBERON:0000353,7.21e-07,15;UBERON:0002113,7.64e-07,26;UBERON:0003918,7.64e-07,26;UBERON:0011143,7.64e-07,26;UBERON:0005095,7.64e-07,26;UBERON:0007687,7.64e-07,26 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,1.47440361900905,11.1648186875588,6.55324116390517,15.0347177590219,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,1.23186982565596,0.251085279189606,0,0,0,0,0,0.619264493264304,0.919421224478927,1.204823675113,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.73815822752988,0,0.973269740605272,0.189069634328136,0,0,3.01251873644739,4.00724817121796,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.640672166455702,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0.184099797284599,0.323292113637624,0,0.10075209822764,0.169560592310488,6.76412986071539,0.818238361772504,2.86804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,1.65629520055781,2.86593973132773,3.37415441836875,4.08087699109858,2.61455332910887,2.60997681022206,2.29213223872279,3.13954344200554,2.30848294167834,0,0,2.057870056657,0,0,0,0,0,4.05861847192275,0.171567810298526,0.768251997860379,2.24803506515239,1.10581869652794,2.59247646443883,0,0,0,0.811512834825538,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,2.14940454486836,1.16253575405585,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,1.08524321078289,0,0,0,0,2.71295439353627,3.48613383440118,4.09889263846434,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,1.73472656537328,0,0,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0,0,0,15.156378572313,36.6157966923094,42.9394216528146,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,5.41439535488894,3.61972084390749,9.41219723012226,2.92278449306521,0.949964660035881,0,0,0.863663664408557,1.54227252690289,5.96082162596476,19.0642114064844,4.33289664176565,10.8039881160734,4.02974558499921,0,0,0.256450125116389,5.24823433119529,0.325378394664303,3.29731237272711,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0.768760269460425,0.255225424989168,0.6069466851333,0,0.31481234683064,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,1.34710957815717,0.670302275535787,2.17781969722645,2.35359501941948,2.58303223602738,0,3.99087138183008,2.06751060186264,0,0,0,0,0,0,0,0,0,0,11.7619303670895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,5.23993513143015,0,0,0,0,127.250810365189,23.7571744666111,127.471691371181,0,0,0.111308705022906,0,0,2.19172787076177,1.65770349318689,0,1.1249555075237,0,0,2.69605053441981,14.3216939740487,0,0.0986434056369336,0,0,0,0,0,0,0,0,3.18621655199399,0.254253650292766,1.18193840883968,0,0,0,0,0,0,0,0,0,11.220661742456,0.697118721393016,1.00035336054936,0,0.23056390438806,0,0.217294743844016,35.4091287302431,0.549585560411174,1.5991043280559,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,2.40773294189637,0,0,1.17398771359254,0,0.394584402849391,0,0,0,0,0,0,0,0,0,1.42304773014896,0.277349346026277,0.867798691675654,0.195984794828755,2.43765778425127,2.79562669187248,0,3.96700958285249,4.5315376593435,4.59846559497972,0.387956065953678,0,2.25980740780532,0.137041924646751,0,0,8.60426084033133,8.49683494666257,2.56143593687223,1.9980960958213,3.74635084600676,0,0,1.00838358591705,0.49701014226173,20.9767690808948,3.66941356398758,3.451893928307,0,0,0,0,0,0,0,0.279282401272254,0,0,2.59582700648688,0,0.223171457441873,0.0671834724867263,0,0,0.630265458457789,0.329663433524666,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.94081976099493,0.105600336519406,0.179287339332845,8.0604382874167,0,0,0,0,2.5926644736038,0,0,0,0,0.339936274560377,0,0,0,0,0.171086837884329,5.63852017853338,24.133955240299,11.6331185773753,13.6698888264575,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,3.05845565607623,0,0,0,0,0,0,0,0,0,0,0,0,0.955780602982214,0,1.24210365501008,0,0,2.60872530905867,0.751288044986092,3.80805212168795,0.406870733204662,0,1.50374779859484,0,1.19428766609585,0,0,0,0,28.3151150698736,15.8686777617445,3.91491437947817,10.6551784990768,6.71415175539119,11.7473618163104,2.32815493405934,5.86722749605847,15.1305994209308,21.3793866594516,2.31496845925098,4.39250345697989,0,6.90860683462397,2.43087964941906,0,0,0,0,0,0.983091635014877,3.59230609709666,0,0,0,0.567515953566836,0,3.35710818526667,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0.3062454773532,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0.115525666150338,0,0,0,1.27857558193737,0,0,0.785720083444267,4.25806985526251,27.64908812258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| |||
|short_description=p2@MSLN | |||
}} |
Revision as of 01:42, 12 January 2014
Short description: | p2@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -15bp_to_ENST00000545450, NM_005823, uc002cjt.1, uc002cju.1_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.44e-34 | 253 |
mesothelial cell | 4.33e-20 | 19 |
kidney tubule cell | 1.20e-11 | 10 |
nephron tubule epithelial cell | 1.20e-11 | 10 |
squamous epithelial cell | 2.77e-11 | 63 |
epithelial cell of nephron | 1.86e-10 | 15 |
kidney cortical cell | 3.95e-09 | 12 |
renal cortical epithelial cell | 3.95e-09 | 12 |
kidney cell | 7.05e-09 | 17 |
kidney epithelial cell | 7.05e-09 | 17 |
extraembryonic cell | 2.94e-08 | 19 |
glandular epithelial cell | 7.11e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.59e-14 | 106 |
cell type cancer | 2.84e-09 | 143 |
cancer | 1.61e-08 | 235 |
disease of cellular proliferation | 1.73e-08 | 239 |
adenocarcinoma | 1.64e-07 | 25 |