FFCP PHASE1:Hg19::chr17:26800592..26800609,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10917 | |||
|TSSclassifier=strong | |||
|UniProt=E7ETH5,F5GZ33,F5GWV6,B4DPL1,Q13183 | |||
|association_with_transcript=-54bp_to_ENST00000444914,ENST00000541739,ENST00000545060,NM_001145975,NM_001145976,NM_003984,NR_027384,uc002hbh.2,uc002hbi.2,uc010wal.1,uc010wam.1,uc010wan.1,uc010wao.1_5end | |||
|coexpression_cluster_id=C791 | |||
|description=CAGE_peak_5_at_SLC13A2_5end | |||
|id=chr17:26800592..26800609,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.56e-19;1!UBERON:0005754;1.56e-19;1!UBERON:0008801;3.56e-19;1!UBERON:0007297;1.89e-10;2!UBERON:0008814;2.85e-10;2!UBERON:0010056;2.85e-10;2!UBERON:0006595;9.26e-10;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.12e-23!3;UBERON:0004054!2.12e-23!3;UBERON:0005904!1.05e-17!4;UBERON:0001829!1.73e-16!2;UBERON:0003127!3.18e-16!2;UBERON:0001630!5.83e-16!2;UBERON:0005090!5.83e-16!2;UBERON:0007023!1.22e-15!115;UBERON:0000341!1.23e-15!2;UBERON:0001044!2.89e-12!6;UBERON:0003293!2.89e-12!6;UBERON:0003294!2.89e-12!6;UBERON:0010047!2.89e-12!6;UBERON:0000167!2.89e-12!6;UBERON:0003135!4.63e-11!11;UBERON:0000078!2.03e-10!18;UBERON:0001000!3.31e-09!1;UBERON:0005352!3.31e-09!1;UBERON:0001736!3.58e-09!1;UBERON:0006298!3.58e-09!1;UBERON:0000998!3.87e-09!1;UBERON:0006868!3.87e-09!1;UBERON:0001831!4.89e-09!1;UBERON:0001567!4.89e-09!1;UBERON:0008801!4.89e-09!1;UBERON:0000166!6.71e-09!21;UBERON:0002426!7.18e-09!1;UBERON:0003831!7.18e-09!1;UBERON:0003898!7.18e-09!1;UBERON:0004830!7.18e-09!1;UBERON:0001774!7.18e-09!1;UBERON:0003830!7.18e-09!1;UBERON:0005175!7.18e-09!1;UBERON:0003897!7.18e-09!1;UBERON:0001103!7.18e-09!1;UBERON:0010084!7.18e-09!1;UBERON:0005418!8.36e-09!1;UBERON:0001389!8.36e-09!1;UBERON:0000026!8.36e-09!1;UBERON:0008784!8.36e-09!1;UBERON:0006058!8.36e-09!1;UBERON:0003663!8.36e-09!1;UBERON:0001383!8.36e-09!1;UBERON:0004256!8.36e-09!1;UBERON:0002529!8.36e-09!1;UBERON:0004708!8.36e-09!1;UBERON:0002101!8.36e-09!1;UBERON:0004709!8.36e-09!1;UBERON:0003661!8.36e-09!1;UBERON:0002471!8.36e-09!1;UBERON:0004357!8.36e-09!1;UBERON:0009872!8.36e-09!1;UBERON:0004347!8.36e-09!1;UBERON:0005420!8.36e-09!1;UBERON:0005732!8.36e-09!1;UBERON:0006057!8.36e-09!1;UBERON:0000978!8.36e-09!1;UBERON:0002103!8.36e-09!1;UBERON:0001665!8.36e-09!1;UBERON:0003823!8.36e-09!1;UBERON:0000154!8.36e-09!1;UBERON:0005733!8.36e-09!1;UBERON:0005730!8.36e-09!1;UBERON:0004921!1.07e-08!129;UBERON:0004185!1.07e-08!129;UBERON:0001301!1.53e-08!1;UBERON:0002372!1.65e-08!1;UBERON:0001961!1.65e-08!1;UBERON:0001744!1.65e-08!1;UBERON:0001735!1.65e-08!1;UBERON:0001155!3.94e-08!9;UBERON:0003408!1.53e-07!10;UBERON:0000161!2.90e-07!35;UBERON:0001007!8.07e-07!155;UBERON:0001555!8.07e-07!155;UBERON:0007026!8.07e-07!155;UBERON:0000059!9.90e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.48e-37;2!UBERON:0003127;1.70e-36;2!UBERON:0001044;8.14e-28;6!UBERON:0003293;8.14e-28;6!UBERON:0003294;8.14e-28;6!UBERON:0010047;8.14e-28;6!UBERON:0003408;8.14e-28;6!UBERON:0000167;8.14e-28;6!UBERON:0006947;2.64e-25;3!UBERON:0004054;2.64e-25;3!UBERON:0001000;1.08e-19;1!UBERON:0005352;1.08e-19;1!UBERON:0000998;1.56e-19;1!UBERON:0001736;1.56e-19;1!UBERON:0006868;1.56e-19;1!UBERON:0005904;2.97e-19;4!UBERON:0001831;3.56e-19;1!UBERON:0001567;3.56e-19;1!UBERON:0004921;3.52e-17;33!UBERON:0001041;2.48e-12;14!UBERON:0003126;3.48e-11;7!UBERON:0001005;3.48e-11;7!UBERON:0000165;1.09e-10;28!UBERON:0001555;1.32e-10;54!UBERON:0004089;2.85e-10;2!UBERON:0000160;1.25e-09;17!UBERON:0000161;3.02e-09;19!UBERON:0000166;3.02e-09;19!UBERON:0001155;6.61e-09;9!UBERON:0000058;2.82e-08;10!UBERON:0005409;1.16e-07;22!UBERON:0003135;1.33e-07;11!UBERON:0000059;1.90e-07;11!UBERON:0001723;2.88e-07;3!UBERON:0001033;2.88e-07;3!UBERON:0007023;7.05e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.73e-37,2;UBERON:0003127,2.04e-36,2;UBERON:0001044,6.48e-28,6;UBERON:0003293,6.48e-28,6;UBERON:0003294,6.48e-28,6;UBERON:0010047,6.48e-28,6;UBERON:0000167,6.48e-28,6;UBERON:0006947,2.64e-25,3;UBERON:0004054,2.64e-25,3;UBERON:0001000,1.08e-19,1;UBERON:0005352,1.08e-19,1;UBERON:0001736,1.30e-19,1;UBERON:0006298,1.30e-19,1;UBERON:0000998,1.56e-19,1;UBERON:0006868,1.56e-19,1;UBERON:0001831,2.71e-19,1;UBERON:0001567,2.71e-19,1;UBERON:0008801,2.71e-19,1;UBERON:0005904,2.98e-19,4;UBERON:0003408,4.72e-17,10;UBERON:0007023,3.28e-15,114;UBERON:0000166,1.64e-13,22;UBERON:0004921,1.11e-11,118;UBERON:0003126,3.66e-11,7;UBERON:0001005,3.66e-11,7;UBERON:0000165,2.47e-10,29;UBERON:0000930,2.47e-10,29;UBERON:0004089,2.49e-10,2;UBERON:0000160,1.21e-09,17;UBERON:0001007,2.11e-09,145;UBERON:0001555,2.11e-09,145;UBERON:0007026,2.11e-09,145;UBERON:0001155,6.11e-09,9;UBERON:0001004,1.28e-08,74;UBERON:0004119,1.83e-08,160;UBERON:0000925,1.83e-08,160;UBERON:0006595,1.83e-08,160;UBERON:0000161,2.21e-08,36;UBERON:0003135,1.33e-07,11;UBERON:0000059,1.78e-07,11;UBERON:0001041,2.66e-07,87;UBERON:0001723,3.35e-07,3;UBERON:0001033,3.35e-07,3;UBERON:0010056,3.35e-07,3;UBERON:0005409,7.56e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.32686346755009,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,5.12959723704208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31386509994472,0,0,2.54032230114557,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,2.2380505851304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75237570042724,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0,0,0,0,1.08858373948481,0,0.134704106029175,1.2192774916755,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SLC13A2 | |||
}} |
Revision as of 14:23, 20 January 2014
Short description: | p5@SLC13A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC13A2_5end |
Coexpression cluster: | C791_salivary_epididymis_submaxillary_ductus_seminal_parotid_colon |
Association with transcript: | -54bp_to_ENST00000444914, ENST00000541739, ENST00000545060, NM_001145975, NM_001145976, NM_003984, NR_027384, uc002hbh.2, uc002hbi.2, uc010wal.1, uc010wam.1, uc010wan.1, uc010wao.1_5end |
EntrezGene: | SLC13A2 |
HGNC: | 10917 |
UniProt: | E7ETH5F5GZ33F5GWV6B4DPL1Q13183 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data