FFCP PHASE1:Hg19::chr17:3642270..3642281,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr17:3642270..3642281,- | |||
|id=chr17:3642270..3642281,- | |||
|ontology_enrichment_celltype=CL:0002057!2.46e-07!42;CL:0000860!8.15e-07!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2531;1.39e-09;51!DOID:0060083;1.39e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.89e-11,51;DOID:0060083,6.89e-11,51;DOID:1240,2.54e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.70e-12!7;UBERON:0002370!1.81e-10!4;UBERON:0005058!1.81e-10!4;UBERON:0009113!1.81e-10!4;UBERON:0003295!1.81e-10!4;UBERON:0005562!1.81e-10!4;UBERON:0002336!3.61e-10!1;UBERON:0001018!3.61e-10!1;UBERON:0002473!3.61e-10!1;UBERON:0005340!3.61e-10!1;UBERON:0002316!3.61e-10!1;UBERON:0003544!3.61e-10!1;UBERON:0001020!3.61e-10!1;UBERON:0005970!3.61e-10!1;UBERON:0002437!3.61e-10!1;UBERON:0001882!4.75e-10!1;UBERON:0005403!4.75e-10!1;UBERON:0000974!4.96e-09!10;UBERON:0003351!2.95e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.41e-67;2!UBERON:0005058;7.41e-67;2!UBERON:0009113;7.41e-67;2!UBERON:0004177;1.59e-27;5!UBERON:0005057;1.59e-27;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.28e-34,4;UBERON:0005058,4.28e-34,4;UBERON:0009113,4.28e-34,4;UBERON:0003295,4.28e-34,4;UBERON:0005562,4.28e-34,4;UBERON:0003351,3.88e-23,6;UBERON:0004177,5.35e-20,7;UBERON:0005057,5.35e-20,7;UBERON:0000974,2.49e-14,10;UBERON:0003408,2.49e-14,10;UBERON:0001042,2.49e-14,10;UBERON:0009145,2.49e-14,10;UBERON:0006562,4.00e-13,11;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0008814,2.09e-08,18;UBERON:0001557,5.16e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41882267384608,0.159426272728822,0,2.10655907145603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,4.45663477868442,6.89029328684023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p@chr17:3642270..3642281,- | |||
}} |
Revision as of 13:09, 20 January 2014
Short description: | p@chr17:3642270..3642281, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:3642270..3642281, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.28e-34 | 4 |
hemolymphoid system gland | 4.28e-34 | 4 |
thymic region | 4.28e-34 | 4 |
pharyngeal gland | 4.28e-34 | 4 |
thymus primordium | 4.28e-34 | 4 |
pharyngeal epithelium | 3.88e-23 | 6 |
hemopoietic organ | 5.35e-20 | 7 |
immune organ | 5.35e-20 | 7 |
neck | 2.49e-14 | 10 |
gland of gut | 2.49e-14 | 10 |
chordate pharynx | 2.49e-14 | 10 |
pharyngeal region of foregut | 2.49e-14 | 10 |
pharynx | 4.00e-13 | 11 |
entire pharyngeal arch endoderm | 4.00e-13 | 11 |
early pharyngeal endoderm | 4.00e-13 | 11 |
pharyngeal arch system | 2.09e-08 | 18 |
upper respiratory tract | 5.16e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.89e-11 | 51 |
immune system cancer | 6.89e-11 | 51 |
leukemia | 2.54e-08 | 39 |