FFCP PHASE1:Hg19::chr17:75872051..75872092,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr17:75872051..75872092,- | |||
|id=chr17:75872051..75872092,- | |||
|ontology_enrichment_celltype=CL:0002057!1.50e-68!42;CL:0000860!1.73e-63!45;CL:0000766!2.10e-56!76;CL:0002009!3.77e-44!65;CL:0000738!6.91e-43!140;CL:0002194!1.87e-42!63;CL:0000576!1.87e-42!63;CL:0000040!1.87e-42!63;CL:0000559!1.87e-42!63;CL:0000763!2.44e-40!112;CL:0000049!2.44e-40!112;CL:0000557!7.68e-40!71;CL:0000839!1.52e-37!70;CL:0000037!5.70e-35!172;CL:0000566!5.70e-35!172;CL:0000988!1.64e-32!182;CL:0002032!2.76e-31!165;CL:0000837!2.76e-31!165;CL:0002087!5.71e-30!119;CL:0002031!1.32e-26!124;CL:0000094!8.48e-25!8;CL:0000081!9.88e-18!11;CL:0000134!2.10e-13!358;CL:0000775!3.12e-13!3;CL:0002320!5.96e-13!365;CL:0000219!2.37e-11!390;CL:0000034!2.55e-10!444;CL:0000048!3.24e-10!430;CL:0000723!6.24e-10!436;CL:0000771!1.78e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.28e-59;8!CL:0000081;7.70e-43;11!CL:0000775;5.07e-30;3!CL:0000766;6.89e-25;69!CL:0000771;7.69e-21;2!CL:0000860;3.48e-17;33!CL:0002057;3.48e-17;33!CL:0002393;5.05e-15;6!CL:0002397;5.05e-15;6!CL:0000767;6.52e-14;3!CL:0000576;1.30e-13;48!CL:0000473;4.59e-11;39!CL:0000234;4.59e-11;39!CL:0000763;3.75e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.67e-59,8;CL:0000081,8.20e-43,11;CL:0000766,1.38e-39,72;CL:0000775,5.07e-30,3;CL:0000763,1.19e-25,108;CL:0000049,1.19e-25,108;CL:0000860,2.34e-25,42;CL:0002057,2.34e-25,42;CL:0000473,5.48e-22,48;CL:0000234,5.48e-22,48;CL:0000771,7.70e-21,2;CL:0000738,7.33e-20,136;CL:0002194,2.89e-17,59;CL:0000576,2.89e-17,59;CL:0000040,2.89e-17,59;CL:0000559,2.89e-17,59;CL:0002009,1.18e-16,61;CL:0002032,2.25e-16,161;CL:0000837,2.25e-16,161;CL:0000037,1.40e-15,168;CL:0000839,2.73e-15,66;CL:0000557,4.84e-15,67;CL:0000988,1.19e-14,177;CL:0000767,6.96e-14,3;CL:0002393,3.16e-10,9;CL:0002397,3.16e-10,9;CL:0002087,4.00e-08,115;CL:0002031,1.02e-07,120;CL:0000134,8.07e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;6.62e-18;42!CL:0000049;5.32e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.21e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,9.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.31e-40!80;UBERON:0001474!1.27e-36!86;UBERON:0002390!4.20e-34!102;UBERON:0003061!4.20e-34!102;UBERON:0002193!2.38e-30!112;UBERON:0004765!4.52e-30!101;UBERON:0001434!4.52e-30!101;UBERON:0002405!1.77e-27!115;UBERON:0002204!3.36e-15!167;UBERON:0002384!3.13e-13!375;UBERON:0003081!6.49e-12!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.21e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-15,76;UBERON:0001474,2.24e-14,82;UBERON:0004765,6.00e-13,90;UBERON:0002405,1.78e-12,93;UBERON:0002390,9.46e-12,98;UBERON:0003061,9.46e-12,98;UBERON:0001434,1.76e-11,100;UBERON:0002193,1.69e-10,108;UBERON:0007195,1.77e-10,1;UBERON:0002384,2.59e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29382842958246,0,3.09632246632152,0,0,0,0,0,0,3.32397245119126,2.80762226458198,3.68918480216948,0,0,0,0.436194716338694,1.13362783106643,0.727752183563449,0,1.23350366406548,1.23882548358041,0,0.512321413058201,0.236482229888585,0,0,2.70852973188684,0.376484679085209,0.545812300115692,0.449446968890169,1.22433556948361,1.28371610830437,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0.870627715885752,2.26954089876456,0,0,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,1.58231193720442,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.3477753231466,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,1.30139853857622,0,0,0,19.4741826226267,11.966458368161,17.4054515643135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37190407549935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:75872051..75872092,- | |||
}} |
Revision as of 17:36, 20 January 2014
Short description: | p@chr17:75872051..75872092, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:75872051..75872092, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.67e-59 | 8 |
blood cell | 8.20e-43 | 11 |
myeloid leukocyte | 1.38e-39 | 72 |
neutrophil | 5.07e-30 | 3 |
myeloid cell | 1.19e-25 | 108 |
common myeloid progenitor | 1.19e-25 | 108 |
classical monocyte | 2.34e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-25 | 42 |
defensive cell | 5.48e-22 | 48 |
phagocyte | 5.48e-22 | 48 |
eosinophil | 7.70e-21 | 2 |
leukocyte | 7.33e-20 | 136 |
monopoietic cell | 2.89e-17 | 59 |
monocyte | 2.89e-17 | 59 |
monoblast | 2.89e-17 | 59 |
promonocyte | 2.89e-17 | 59 |
macrophage dendritic cell progenitor | 1.18e-16 | 61 |
hematopoietic oligopotent progenitor cell | 2.25e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-16 | 161 |
hematopoietic stem cell | 1.40e-15 | 168 |
myeloid lineage restricted progenitor cell | 2.73e-15 | 66 |
granulocyte monocyte progenitor cell | 4.84e-15 | 67 |
hematopoietic cell | 1.19e-14 | 177 |
basophil | 6.96e-14 | 3 |
intermediate monocyte | 3.16e-10 | 9 |
CD14-positive, CD16-positive monocyte | 3.16e-10 | 9 |
nongranular leukocyte | 4.00e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.02e-07 | 120 |
mesenchymal cell | 8.07e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-15 | 76 |
bone element | 2.24e-14 | 82 |
skeletal element | 6.00e-13 | 90 |
immune system | 1.78e-12 | 93 |
hematopoietic system | 9.46e-12 | 98 |
blood island | 9.46e-12 | 98 |
skeletal system | 1.76e-11 | 100 |
hemolymphoid system | 1.69e-10 | 108 |
stroma of bone marrow | 1.77e-10 | 1 |
connective tissue | 2.59e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 9.05e-11 | 1 |