FFCP PHASE1:Hg19::chr17:79478248..79478292,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=71 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=144 | |||
|TSSclassifier=strong | |||
|UniProt=Q96DE1 | |||
|association_with_transcript=75bp_to_BC009544_5end | |||
|coexpression_cluster_id=C3698 | |||
|description=CAGE_peak_8_at_ACTG1_5end | |||
|id=chr17:79478248..79478292,- | |||
|ontology_enrichment_celltype=CL:0000222!4.92e-13!119;CL:0000055!7.90e-13!180;CL:0002321!3.74e-12!248;CL:0000548!5.11e-12!679;CL:0000004!5.11e-12!679;CL:0000255!5.11e-12!679;CL:0000144!5.62e-12!625;CL:0000220!9.60e-12!246;CL:0002371!1.81e-11!591;CL:0000012!2.11e-11!682;CL:0000183!5.85e-09!59;CL:0000393!1.04e-08!60;CL:0000211!1.04e-08!60;CL:0000680!5.64e-08!57;CL:0000056!5.64e-08!57;CL:0000355!5.64e-08!57;CL:0000003!2.19e-07!722;CL:0000187!2.63e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.07e-13,121;CL:0002321,6.48e-12,250;CL:0000393,1.77e-08,61;CL:0000211,1.77e-08,61;CL:0000680,6.99e-08,58;CL:0000056,6.99e-08,58;CL:0000355,6.99e-08,58;CL:0000187,3.58e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.70e-10!79;UBERON:0007798!4.70e-10!79;UBERON:0003914!5.40e-10!118;UBERON:0005256!1.55e-09!143;UBERON:0000914!1.08e-08!83;UBERON:0002329!1.08e-08!83;UBERON:0003077!1.08e-08!83;UBERON:0003059!1.08e-08!83;UBERON:0007282!1.08e-08!83;UBERON:0009618!1.08e-08!83;UBERON:0007285!1.08e-08!83;UBERON:0004872!1.31e-08!84;UBERON:0000486!2.24e-08!82;UBERON:0004535!2.60e-08!110;UBERON:0004290!5.03e-08!70;UBERON:0000055!5.09e-08!69;UBERON:0001981!5.28e-08!60;UBERON:0007500!5.28e-08!60;UBERON:0004537!5.28e-08!60;UBERON:0006965!5.28e-08!60;UBERON:0001009!1.55e-07!113;UBERON:0000490!2.64e-07!138;UBERON:0001637!3.25e-07!42;UBERON:0003509!3.25e-07!42;UBERON:0004572!3.25e-07!42;UBERON:0001134!3.59e-07!61;UBERON:0002036!3.59e-07!61;UBERON:0003082!3.59e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.54e-07;9!UBERON:0001557;3.54e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.13e-11,78;UBERON:0003914,1.62e-10,117;UBERON:0002049,6.93e-10,78;UBERON:0007798,6.93e-10,78;UBERON:0004872,6.31e-09,83;UBERON:0000486,1.35e-08,83;UBERON:0002329,2.14e-08,71;UBERON:0003059,2.14e-08,71;UBERON:0007282,2.14e-08,71;UBERON:0004290,2.14e-08,71;UBERON:0009618,2.14e-08,71;UBERON:0007524,2.35e-08,73;UBERON:0007500,3.17e-08,59;UBERON:0001981,3.17e-08,59;UBERON:0004537,3.17e-08,59;UBERON:0006965,3.17e-08,59;UBERON:0004535,3.60e-08,109;UBERON:0003077,5.16e-08,72;UBERON:0007285,5.16e-08,72;UBERON:0000490,6.32e-08,148;UBERON:0005256,7.32e-08,122;UBERON:0000055,7.98e-08,68;UBERON:0001637,9.41e-08,42;UBERON:0003509,9.41e-08,42;UBERON:0004572,9.41e-08,42;UBERON:0001009,1.16e-07,112;UBERON:0001134,2.83e-07,62;UBERON:0002036,2.83e-07,62;UBERON:0003082,2.83e-07,62;UBERON:0001737,4.30e-07,9;UBERON:0003104,9.20e-07,160;UBERON:0009142,9.20e-07,160 | |||
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| |||
|short_description=p8@ACTG1 | |||
}} |
Revision as of 17:58, 20 January 2014
Short description: | p8@ACTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ACTG1_5end |
Coexpression cluster: | C3698_Olfactory_Hair_Neurons_Fibroblast_Endothelial_Adipocyte_Smooth |
Association with transcript: | 75bp_to_BC009544_5end |
EntrezGene: | ACTG1 |
HGNC: | 144 |
UniProt: | Q96DE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.07e-13 | 121 |
embryonic cell | 6.48e-12 | 250 |
electrically responsive cell | 1.77e-08 | 61 |
electrically active cell | 1.77e-08 | 61 |
muscle precursor cell | 6.99e-08 | 58 |
myoblast | 6.99e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.99e-08 | 58 |
muscle cell | 3.58e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 7.13e-11 | 78 |
epithelial tube | 1.62e-10 | 117 |
vasculature | 6.93e-10 | 78 |
vascular system | 6.93e-10 | 78 |
splanchnic layer of lateral plate mesoderm | 6.31e-09 | 83 |
multilaminar epithelium | 1.35e-08 | 83 |
somite | 2.14e-08 | 71 |
presomitic mesoderm | 2.14e-08 | 71 |
presumptive segmental plate | 2.14e-08 | 71 |
dermomyotome | 2.14e-08 | 71 |
trunk paraxial mesoderm | 2.14e-08 | 71 |
dense mesenchyme tissue | 2.35e-08 | 73 |
epithelial tube open at both ends | 3.17e-08 | 59 |
blood vessel | 3.17e-08 | 59 |
blood vasculature | 3.17e-08 | 59 |
vascular cord | 3.17e-08 | 59 |
cardiovascular system | 3.60e-08 | 109 |
paraxial mesoderm | 5.16e-08 | 72 |
presumptive paraxial mesoderm | 5.16e-08 | 72 |
unilaminar epithelium | 6.32e-08 | 148 |
trunk mesenchyme | 7.32e-08 | 122 |
vessel | 7.98e-08 | 68 |
artery | 9.41e-08 | 42 |
arterial blood vessel | 9.41e-08 | 42 |
arterial system | 9.41e-08 | 42 |
circulatory system | 1.16e-07 | 112 |
skeletal muscle tissue | 2.83e-07 | 62 |
striated muscle tissue | 2.83e-07 | 62 |
myotome | 2.83e-07 | 62 |
larynx | 4.30e-07 | 9 |
mesenchyme | 9.20e-07 | 160 |
entire embryonic mesenchyme | 9.20e-07 | 160 |