FFCP PHASE1:Hg19::chr19:19051972..19051983,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17514 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NSC5 | |||
|association_with_transcript=15bp_to_ENST00000355887,ENST00000357832_5end | |||
|description=CAGE_peak_2_at_HOMER3_5end | |||
|id=chr19:19051972..19051983,- | |||
|ontology_enrichment_celltype=CL:0000220!1.04e-19!246;CL:0002321!3.60e-19!248;CL:0000222!6.21e-18!119;CL:0000115!9.32e-16!35;CL:0002078!2.37e-15!44;CL:0000213!7.94e-15!57;CL:0000215!7.94e-15!57;CL:0002139!3.75e-13!24;CL:0000071!1.34e-10!18;CL:0002546!1.34e-10!18;CL:0000055!4.77e-10!180;CL:0002371!2.46e-08!591;CL:0000076!3.10e-07!62;CL:0000066!4.14e-07!254;CL:0000144!6.45e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.27e-14;36!CL:0002139;3.77e-14;24!CL:0000071;1.59e-11;18!CL:0002078;1.96e-11;45!CL:0000213;5.74e-09;58!CL:0000215;5.74e-09;58!CL:1000413;5.03e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.18e-18,250;CL:0000115,1.30e-17,36;CL:0000222,2.51e-17,121;CL:0002078,1.06e-16,45;CL:0000213,2.29e-15,58;CL:0000215,2.29e-15,58;CL:0002139,1.29e-14,24;CL:0000071,9.63e-12,18;CL:0002546,9.63e-12,18;CL:0000076,3.45e-07,63;CL:1000413,4.88e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.59e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.99e-17!79;UBERON:0007798!2.99e-17!79;UBERON:0000468!5.52e-17!659;UBERON:0000467!6.39e-17!625;UBERON:0000483!9.16e-17!309;UBERON:0000119!1.10e-16!312;UBERON:0000480!1.40e-16!626;UBERON:0000055!1.79e-16!69;UBERON:0004872!1.03e-15!84;UBERON:0001981!3.54e-14!60;UBERON:0007500!3.54e-14!60;UBERON:0004537!3.54e-14!60;UBERON:0006965!3.54e-14!60;UBERON:0004535!3.76e-12!110;UBERON:0004111!2.57e-11!241;UBERON:0000477!2.78e-11!286;UBERON:0001009!2.89e-11!113;UBERON:0001637!3.38e-11!42;UBERON:0003509!3.38e-11!42;UBERON:0004572!3.38e-11!42;UBERON:0000923!1.00e-10!604;UBERON:0005291!1.00e-10!604;UBERON:0006598!1.00e-10!604;UBERON:0002532!1.00e-10!604;UBERON:0000922!1.05e-10!612;UBERON:0002050!1.32e-10!605;UBERON:0005423!1.32e-10!605;UBERON:0001986!1.34e-10!18;UBERON:0004638!1.34e-10!18;UBERON:0004852!1.34e-10!18;UBERON:0000475!2.42e-10!365;UBERON:0003914!3.79e-10!118;UBERON:0000025!6.40e-10!194;UBERON:0006914!4.24e-09!25;UBERON:0004573!5.23e-09!33;UBERON:0004571!5.23e-09!33;UBERON:0000487!6.84e-09!22;UBERON:0000486!2.95e-08!82;UBERON:0000490!4.66e-07!138;UBERON:0000914!5.64e-07!83;UBERON:0002329!5.64e-07!83;UBERON:0003077!5.64e-07!83;UBERON:0003059!5.64e-07!83;UBERON:0007282!5.64e-07!83;UBERON:0009618!5.64e-07!83;UBERON:0007285!5.64e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.59e-11;18!UBERON:0001986;1.59e-11;18!UBERON:0004852;1.59e-11;18!UBERON:0000487;1.19e-09;22!UBERON:0006914;1.62e-09;25!UBERON:0007500;4.78e-09;56!UBERON:0001981;4.78e-09;56!UBERON:0004537;4.78e-09;56!UBERON:0000055;7.29e-09;65!UBERON:0000490;1.71e-08;33!UBERON:0001637;2.47e-08;42!UBERON:0003509;2.47e-08;42!UBERON:0004572;2.47e-08;42!UBERON:0004573;2.60e-08;33!UBERON:0004571;2.60e-08;33!UBERON:0003914;1.43e-07;74!UBERON:0002049;3.62e-07;75!UBERON:0007798;3.62e-07;75!UBERON:0003915;5.03e-07;9!UBERON:0004700;5.03e-07;9!UBERON:0001917;5.03e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,4.31e-17,78;UBERON:0007798,4.31e-17,78;UBERON:0000055,4.35e-17,68;UBERON:0004872,6.01e-16,83;UBERON:0000483,1.07e-14,306;UBERON:0000119,2.70e-14,309;UBERON:0007500,2.83e-14,59;UBERON:0001981,2.83e-14,59;UBERON:0004537,2.83e-14,59;UBERON:0006965,2.83e-14,59;UBERON:0004535,5.09e-12,109;UBERON:0004638,9.63e-12,18;UBERON:0001986,9.63e-12,18;UBERON:0004852,9.63e-12,18;UBERON:0001637,3.01e-11,42;UBERON:0003509,3.01e-11,42;UBERON:0004572,3.01e-11,42;UBERON:0003914,5.54e-11,117;UBERON:0001009,5.91e-11,112;UBERON:0004111,3.20e-10,240;UBERON:0000487,6.49e-10,22;UBERON:0006914,9.21e-10,25;UBERON:0000025,3.57e-09,192;UBERON:0004573,4.46e-09,33;UBERON:0004571,4.46e-09,33;UBERON:0000490,5.52e-08,148;UBERON:0007503,1.89e-07,78;UBERON:0000486,4.45e-07,83;UBERON:0003915,4.88e-07,9;UBERON:0004700,4.88e-07,9;UBERON:0001917,4.88e-07,9 | |||
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| |||
|short_description=p2@HOMER3 | |||
}} |
Revision as of 22:18, 20 January 2014
Short description: | p2@HOMER3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOMER3_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000355887, ENST00000357832_5end |
EntrezGene: | HOMER3 |
HGNC: | 17514 |
UniProt: | Q9NSC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.18e-18 | 250 |
endothelial cell | 1.30e-17 | 36 |
mesodermal cell | 2.51e-17 | 121 |
meso-epithelial cell | 1.06e-16 | 45 |
lining cell | 2.29e-15 | 58 |
barrier cell | 2.29e-15 | 58 |
endothelial cell of vascular tree | 1.29e-14 | 24 |
blood vessel endothelial cell | 9.63e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.63e-12 | 18 |
squamous epithelial cell | 3.45e-07 | 63 |
endothelial cell of artery | 4.88e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vasculature | 4.31e-17 | 78 |
vascular system | 4.31e-17 | 78 |
vessel | 4.35e-17 | 68 |
splanchnic layer of lateral plate mesoderm | 6.01e-16 | 83 |
epithelium | 1.07e-14 | 306 |
cell layer | 2.70e-14 | 309 |
epithelial tube open at both ends | 2.83e-14 | 59 |
blood vessel | 2.83e-14 | 59 |
blood vasculature | 2.83e-14 | 59 |
vascular cord | 2.83e-14 | 59 |
cardiovascular system | 5.09e-12 | 109 |
blood vessel endothelium | 9.63e-12 | 18 |
endothelium | 9.63e-12 | 18 |
cardiovascular system endothelium | 9.63e-12 | 18 |
artery | 3.01e-11 | 42 |
arterial blood vessel | 3.01e-11 | 42 |
arterial system | 3.01e-11 | 42 |
epithelial tube | 5.54e-11 | 117 |
circulatory system | 5.91e-11 | 112 |
anatomical conduit | 3.20e-10 | 240 |
simple squamous epithelium | 6.49e-10 | 22 |
squamous epithelium | 9.21e-10 | 25 |
tube | 3.57e-09 | 192 |
systemic artery | 4.46e-09 | 33 |
systemic arterial system | 4.46e-09 | 33 |
unilaminar epithelium | 5.52e-08 | 148 |
epithelial vesicle | 1.89e-07 | 78 |
multilaminar epithelium | 4.45e-07 | 83 |
endothelial tube | 4.88e-07 | 9 |
arterial system endothelium | 4.88e-07 | 9 |
endothelium of artery | 4.88e-07 | 9 |