FFCP PHASE1:Hg19::chr19:38397839..38397932,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23801 | |||
|TSSclassifier=strong | |||
|UniProt=O60292,Q8IUV1 | |||
|association_with_transcript=0bp_to_ENST00000222345,NM_015073,uc002ohk.2_5end | |||
|description=CAGE_peak_1_at_SIPA1L3_5end | |||
|id=chr19:38397839..38397932,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.79e-09!24;CL:0000826!2.79e-09!24;CL:0000222!5.58e-08!119;CL:0000236!7.38e-08!14;CL:0000115!1.72e-07!35;CL:1000449!1.88e-07!16;CL:0002078!3.42e-07!44;CL:1000497!3.77e-07!18;CL:0002518!3.77e-07!18;CL:0000213!4.28e-07!57;CL:0000215!4.28e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.84e-09;24!CL:1000449;1.31e-08;15!CL:1000497;3.34e-08;17!CL:0002518;3.34e-08;17!CL:0000236;4.33e-08;13!CL:1000507;2.83e-07;10!CL:1000494;2.83e-07;10!CL:0002681;5.75e-07;12!CL:0002584;5.75e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.79e-09,24;CL:0000826,2.79e-09,24;CL:1000449,1.30e-08,15;CL:1000497,3.51e-08,17;CL:0002518,3.51e-08,17;CL:0000236,7.38e-08,14;CL:0000222,7.58e-08,121;CL:0000115,9.62e-08,36;CL:0002078,1.96e-07,45;CL:0000213,2.53e-07,58;CL:0000215,2.53e-07,58;CL:1000507,2.91e-07,10;CL:1000494,2.91e-07,10;CL:0002681,5.61e-07,12;CL:0002584,5.61e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!9.94e-14!241;UBERON:0000119!4.75e-13!312;UBERON:0000025!1.29e-12!194;UBERON:0000483!2.10e-12!309;UBERON:0000477!6.97e-12!286;UBERON:0000055!2.22e-11!69;UBERON:0002049!4.75e-11!79;UBERON:0007798!4.75e-11!79;UBERON:0001981!6.23e-10!60;UBERON:0007500!6.23e-10!60;UBERON:0004537!6.23e-10!60;UBERON:0006965!6.23e-10!60;UBERON:0001637!1.23e-08!42;UBERON:0003509!1.23e-08!42;UBERON:0004572!1.23e-08!42;UBERON:0003887!3.15e-08!21;UBERON:0003914!4.11e-08!118;UBERON:0004535!1.11e-07!110;UBERON:0004573!1.49e-07!33;UBERON:0004571!1.49e-07!33;UBERON:0000475!1.70e-07!365;UBERON:0004211!1.88e-07!16;UBERON:0001285!1.88e-07!16;UBERON:0007684!1.88e-07!16;UBERON:0003220!1.88e-07!16;UBERON:0004208!1.88e-07!16;UBERON:0003056!2.51e-07!61;UBERON:0003075!3.01e-07!86;UBERON:0007284!3.01e-07!86;UBERON:0004876!3.51e-07!20;UBERON:0000080!4.05e-07!18;UBERON:0002120!4.05e-07!18;UBERON:0004875!4.05e-07!18;UBERON:0005721!4.05e-07!18;UBERON:0005754!4.05e-07!18;UBERON:0007297!4.05e-07!18;UBERON:0006555!4.27e-07!17;UBERON:0005103!4.27e-07!17;UBERON:0000083!4.27e-07!17;UBERON:0009201!4.27e-07!17;UBERON:0004819!4.27e-07!17;UBERON:0006553!4.27e-07!17;UBERON:0003074!4.27e-07!17;UBERON:0003060!4.27e-07!17;UBERON:0001009!5.93e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.31e-08;15!UBERON:0004819;1.31e-08;15!UBERON:0001285;1.31e-08;15!UBERON:0007684;1.31e-08;15!UBERON:0003914;1.49e-07;74!UBERON:0004211;2.83e-07;10!UBERON:0009773;2.83e-07;10!UBERON:0001231;2.83e-07;10!UBERON:0004810;2.83e-07;10!UBERON:0004573;4.49e-07;33!UBERON:0004571;4.49e-07;33!UBERON:0001225;5.75e-07;12!UBERON:0008987;5.75e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.28e-13,240;UBERON:0000025,6.23e-13,192;UBERON:0000119,8.17e-13,309;UBERON:0000483,3.56e-12,306;UBERON:0000055,4.31e-11,68;UBERON:0002049,9.01e-11,78;UBERON:0007798,9.01e-11,78;UBERON:0007500,1.20e-09,59;UBERON:0001981,1.20e-09,59;UBERON:0004537,1.20e-09,59;UBERON:0006965,1.20e-09,59;UBERON:0001637,1.23e-08,42;UBERON:0003509,1.23e-08,42;UBERON:0004572,1.23e-08,42;UBERON:0004211,1.30e-08,15;UBERON:0009773,1.30e-08,15;UBERON:0001231,1.30e-08,15;UBERON:0001285,1.30e-08,15;UBERON:0007684,1.30e-08,15;UBERON:0004208,1.30e-08,15;UBERON:0003914,1.85e-08,117;UBERON:0006555,3.65e-08,16;UBERON:0004819,3.65e-08,16;UBERON:0003075,1.32e-07,82;UBERON:0007284,1.32e-07,82;UBERON:0004573,1.49e-07,33;UBERON:0004571,1.49e-07,33;UBERON:0004535,1.86e-07,109;UBERON:0003056,1.94e-07,61;UBERON:0004810,2.91e-07,10;UBERON:0010314,5.02e-07,132;UBERON:0001225,5.61e-07,12;UBERON:0008987,5.61e-07,12;UBERON:0001009,9.61e-07,112 | |||
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| |||
|short_description=p1@SIPA1L3 | |||
}} |
Revision as of 23:04, 20 January 2014
Short description: | p1@SIPA1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIPA1L3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000222345, NM_015073, uc002ohk.2_5end |
EntrezGene: | SIPA1L3 |
HGNC: | 23801 |
UniProt: | O60292Q8IUV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.79e-09 | 24 |
pro-B cell | 2.79e-09 | 24 |
epithelial cell of nephron | 1.30e-08 | 15 |
kidney cell | 3.51e-08 | 17 |
kidney epithelial cell | 3.51e-08 | 17 |
B cell | 7.38e-08 | 14 |
mesodermal cell | 7.58e-08 | 121 |
endothelial cell | 9.62e-08 | 36 |
meso-epithelial cell | 1.96e-07 | 45 |
lining cell | 2.53e-07 | 58 |
barrier cell | 2.53e-07 | 58 |
kidney tubule cell | 2.91e-07 | 10 |
nephron tubule epithelial cell | 2.91e-07 | 10 |
kidney cortical cell | 5.61e-07 | 12 |
renal cortical epithelial cell | 5.61e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.28e-13 | 240 |
tube | 6.23e-13 | 192 |
cell layer | 8.17e-13 | 309 |
epithelium | 3.56e-12 | 306 |
vessel | 4.31e-11 | 68 |
vasculature | 9.01e-11 | 78 |
vascular system | 9.01e-11 | 78 |
epithelial tube open at both ends | 1.20e-09 | 59 |
blood vessel | 1.20e-09 | 59 |
blood vasculature | 1.20e-09 | 59 |
vascular cord | 1.20e-09 | 59 |
artery | 1.23e-08 | 42 |
arterial blood vessel | 1.23e-08 | 42 |
arterial system | 1.23e-08 | 42 |
nephron epithelium | 1.30e-08 | 15 |
renal tubule | 1.30e-08 | 15 |
nephron tubule | 1.30e-08 | 15 |
nephron | 1.30e-08 | 15 |
uriniferous tubule | 1.30e-08 | 15 |
nephrogenic mesenchyme | 1.30e-08 | 15 |
epithelial tube | 1.85e-08 | 117 |
excretory tube | 3.65e-08 | 16 |
kidney epithelium | 3.65e-08 | 16 |
neural plate | 1.32e-07 | 82 |
presumptive neural plate | 1.32e-07 | 82 |
systemic artery | 1.49e-07 | 33 |
systemic arterial system | 1.49e-07 | 33 |
cardiovascular system | 1.86e-07 | 109 |
pre-chordal neural plate | 1.94e-07 | 61 |
nephron tubule epithelium | 2.91e-07 | 10 |
structure with developmental contribution from neural crest | 5.02e-07 | 132 |
cortex of kidney | 5.61e-07 | 12 |
renal parenchyma | 5.61e-07 | 12 |
circulatory system | 9.61e-07 | 112 |