FFCP PHASE1:Hg19::chr19:6110474..6110551,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9983 | |||
|TSSclassifier=strong | |||
|UniProt=P48378 | |||
|association_with_transcript=112bp_to_ENST00000303657,ENST00000359161,NM_000635,NM_134433,uc002meb.2,uc002mec.2,uc010xiy.1_5end | |||
|description=CAGE_peak_1_at_RFX2_5end | |||
|id=chr19:6110474..6110551,- | |||
|ontology_enrichment_celltype=CL:0002057!1.09e-18!42;CL:0000860!1.85e-16!45;CL:0000763!8.07e-15!112;CL:0000049!8.07e-15!112;CL:0000766!4.19e-14!76;CL:0000557!1.19e-11!71;CL:0000839!9.63e-10!70;CL:0002009!1.76e-09!65;CL:0002194!1.49e-08!63;CL:0000576!1.49e-08!63;CL:0000040!1.49e-08!63;CL:0000559!1.49e-08!63;CL:0000081!7.39e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.23e-17;33!CL:0002057;3.23e-17;33!CL:0000473;1.37e-10;39!CL:0000234;1.37e-10;39!CL:0000576;5.75e-10;48!CL:0000766;8.14e-09;69!CL:0000081;7.19e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-18,42;CL:0002057,1.04e-18,42;CL:0000763,4.38e-16,108;CL:0000049,4.38e-16,108;CL:0000766,1.34e-15,72;CL:0000473,6.81e-14,48;CL:0000234,6.81e-14,48;CL:0000557,5.30e-13,67;CL:0000839,6.30e-11,66;CL:0002009,1.05e-10,61;CL:0002194,1.04e-09,59;CL:0000576,1.04e-09,59;CL:0000040,1.04e-09,59;CL:0000559,1.04e-09,59;CL:0000037,5.51e-07,168;CL:0000081,7.27e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.69e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.48e-15!115;UBERON:0002390!7.80e-13!102;UBERON:0003061!7.80e-13!102;UBERON:0002193!2.66e-10!112;UBERON:0001474!4.74e-10!86;UBERON:0002371!6.14e-10!80;UBERON:0004765!2.28e-07!101;UBERON:0001434!2.28e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.75e-15,114;UBERON:0002390,5.71e-14,98;UBERON:0003061,5.71e-14,98;UBERON:0002193,3.22e-11,108;UBERON:0001474,4.09e-11,82;UBERON:0002371,4.76e-11,76;UBERON:0004765,6.66e-08,90;UBERON:0002405,1.93e-07,93;UBERON:0001434,5.13e-07,100 | |||
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| |||
|short_description=p1@RFX2 | |||
}} |
Revision as of 20:48, 20 January 2014
Short description: | p1@RFX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RFX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 112bp_to_ENST00000303657, ENST00000359161, NM_000635, NM_134433, uc002meb.2, uc002mec.2, uc010xiy.1_5end |
EntrezGene: | RFX2 |
HGNC: | 9983 |
UniProt: | P48378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.04e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-18 | 42 |
myeloid cell | 4.38e-16 | 108 |
common myeloid progenitor | 4.38e-16 | 108 |
myeloid leukocyte | 1.34e-15 | 72 |
defensive cell | 6.81e-14 | 48 |
phagocyte | 6.81e-14 | 48 |
granulocyte monocyte progenitor cell | 5.30e-13 | 67 |
myeloid lineage restricted progenitor cell | 6.30e-11 | 66 |
macrophage dendritic cell progenitor | 1.05e-10 | 61 |
monopoietic cell | 1.04e-09 | 59 |
monocyte | 1.04e-09 | 59 |
monoblast | 1.04e-09 | 59 |
promonocyte | 1.04e-09 | 59 |
hematopoietic stem cell | 5.51e-07 | 168 |
blood cell | 7.27e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.75e-15 | 114 |
hematopoietic system | 5.71e-14 | 98 |
blood island | 5.71e-14 | 98 |
hemolymphoid system | 3.22e-11 | 108 |
bone element | 4.09e-11 | 82 |
bone marrow | 4.76e-11 | 76 |
skeletal element | 6.66e-08 | 90 |
immune system | 1.93e-07 | 93 |
skeletal system | 5.13e-07 | 100 |