FFCP PHASE1:Hg19::chr1:161494328..161494332,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=3310 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5239 | |||
|TSSclassifier=strong | |||
|UniProt=B4DHP5 | |||
|association_with_transcript=-2bp_to_ENST00000545155_5end | |||
|coexpression_cluster_id=C3798 | |||
|description=CAGE_peak_1_at_HSPA6_5end | |||
|id=chr1:161494328..161494332,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.08e-20!42;CL:0000860!3.63e-18!45;CL:0000766!1.03e-12!76;CL:0000839!2.96e-12!70;CL:0000557!4.14e-12!71;CL:0002009!2.95e-11!65;CL:0002194!4.60e-10!63;CL:0000576!4.60e-10!63;CL:0000040!4.60e-10!63;CL:0000559!4.60e-10!63;CL:0000763!8.56e-09!112;CL:0000049!8.56e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-34;33!CL:0002057;1.06e-34;33!CL:0000473;2.52e-24;39!CL:0000234;2.52e-24;39!CL:0000576;1.47e-14;48!CL:0000766;1.12e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.49e-28,42;CL:0002057,2.49e-28,42;CL:0000557,1.09e-24,67;CL:0000473,7.19e-24,48;CL:0000234,7.19e-24,48;CL:0000839,3.59e-23,66;CL:0000766,2.31e-22,72;CL:0002009,7.61e-22,61;CL:0002194,3.35e-19,59;CL:0000576,3.35e-19,59;CL:0000040,3.35e-19,59;CL:0000559,3.35e-19,59;CL:0000763,2.21e-15,108;CL:0000049,2.21e-15,108;CL:0002031,6.06e-12,120;CL:0000738,1.79e-10,136;CL:0002032,3.27e-08,161;CL:0000837,3.27e-08,161;CL:0000037,1.56e-07,168;CL:0002087,1.99e-07,115;CL:0000988,9.51e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.31e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-28!115;UBERON:0001049!3.53e-10!57;UBERON:0005068!3.53e-10!57;UBERON:0006241!3.53e-10!57;UBERON:0007135!3.53e-10!57;UBERON:0002371!2.54e-09!80;UBERON:0002390!6.79e-09!102;UBERON:0003061!6.79e-09!102;UBERON:0001017!2.07e-08!82;UBERON:0002405!2.32e-08!115;UBERON:0001474!2.46e-08!86;UBERON:0003080!4.54e-08!42;UBERON:0005743!4.90e-08!86;UBERON:0000955!6.95e-08!69;UBERON:0006238!6.95e-08!69;UBERON:0002616!7.47e-08!59;UBERON:0000062!1.28e-07!511;UBERON:0002193!1.79e-07!112;UBERON:0002420!2.08e-07!9;UBERON:0007245!2.08e-07!9;UBERON:0010009!2.08e-07!9;UBERON:0010011!2.08e-07!9;UBERON:0000454!2.08e-07!9;UBERON:0002780!2.09e-07!41;UBERON:0001890!2.09e-07!41;UBERON:0006240!2.09e-07!41;UBERON:0000073!2.16e-07!94;UBERON:0001016!2.16e-07!94;UBERON:0002308!3.08e-07!9;UBERON:0000125!3.08e-07!9;UBERON:0002298!3.27e-07!8;UBERON:0002346!5.90e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.29e-21,76;UBERON:0002405,1.67e-19,93;UBERON:0001474,1.27e-18,82;UBERON:0002390,5.16e-18,98;UBERON:0003061,5.16e-18,98;UBERON:0002193,1.32e-16,108;UBERON:0004765,3.15e-16,90;UBERON:0001434,8.70e-14,100;UBERON:0003081,8.56e-08,203;UBERON:0007023,2.57e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,2.64513160582167,4.12392904019288,2.32429036905685,1.6446715520873,17.0338503992307,5.46615545412086,1.0246428261164,14.4254160232037,6.55016793399575,19.3645405075148,28.4395621848118,1.12945403725563,0.545812300115692,22.0229014756183,1.53041946185451,2.88836124368484,31.9668562899521,1.31940520074686,0.997318288108159,9.37694451171927,0.580418477257168,1.70215567407342,21.7987787148451,3.26623264833766,7.82224377630302,6.95004303056373,0.605399502633369,1.47311054395026,6.96217252369946,0,0,0.209658645508376,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0.79504962946682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.77236972004421,0,0,0,0.878002283269004,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,75.2601059413003,2.59415916150531,11.2355765749478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0.215627574859517,0,0,0,0,0.167516265334349,0.637938751653163,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94065842880137,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0.657779629937804,1.3071772551245,0,0,0,82.6388913414733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.2312753794773,0,0,0,0,0,0,0,0,0.411362273086194,0,1.08006287447623,0,0,0,0,0.185803175125719,0,0.355709216742071,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.891547074219827,0,4.05865624054073,0.296964680832639,0,0.994147647766298,0.984685914873589,0.222617410045812,0.494411622680279,0,10.3608953890556,0.552567831062295,0,1.53403023753232,2.70786572014353,0,0.0898683511473268,0.179021174675609,0,1.479651084554,0,0,0.969332746095218,0,13.9729658600836,0,0.61221999997337,32.6249808945657,0,0,0.472775363535873,0.344743373241465,0,0.868124974666461,1.77148277162768,0.361789315876224,0,0.331737779793674,0,7.02033270892712,0.10893846351899,0,0.0769502585037971,0,0,0.0897576444097721,0,3.19001159731919,0.366390373607449,0,0,0,0,0.451191321234361,0,0,0,0,0,0,0,0,0,0.442287822516696,2.4441205797345,0,0,0.104421949505455,0.876214728748802,0,0.468528891450678,0,0,0,0.789168805698781,0,0,0.063186579628488,0.150323419414493,0.518440956986236,0,0,0.313932918407225,0,0,0,0,0,0.609414446062818,0,0,0,0,0,1.74580229679155,0,1.12990370390266,0.137041924646751,1.19228767021794,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.686379991447858,0.576219191952599,0.248505071130865,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,10.0541664458012,0,13.6395874669595,0.599037001496973,0,0.446342914883745,0.873385142327441,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,4.04953004792701,3.0952078182318,0.121499113316049,0,0,7.65836986770972,0,0.179287339332845,0,0,1.32418394073086,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0.439656701034247,68.9035822343551,0.387848869084652,1.71902382265497,0,0,7.36833146717093,0.471612915298998,1.24271716604159,0,0,0,0,0.544017803369474,0,0,0.983617892129413,0.314108192500469,0,0,0.1251909307065,2.29363678276028,4.6590201645478,0.620964029413834,1.24513771442608,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,1.31051565830417,0.169732529954025,0,0.867550349813015,2.79322458986622,0,3.86422550506141,11.2079904759966,0,0,0.449604575675217,0,0.638535436228605,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.376051641746286,0,3.12605604493237,0.261906694481422,0,0.147856086217045,0.202612753855184,0,0.413373593002368,0,0,0,0,5.62787981950786,0.127762427639595,2.67850917939143,0.336283722218824,0,0.227662191351298,0.266107110487916,0,0,0.0679697329768317,0,0.118193840883968,0.444925607568277,1.80534113556182,0.314231179832004,0.280272163313789,0.913158720509496,0.215927591218621,0,0.428859265059938,0,0.116241425368125,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,1.39265542612958,0,0,1.09940516745429,1.81155412280008,0.154348316215889,0,4.703172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| |||
|short_description=p1@HSPA6 | |||
}} |
Revision as of 21:56, 10 January 2014
Short description: | p1@HSPA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HSPA6_5end |
Coexpression cluster: | C3798_vagina_Mast_liver_breast_CD14_thymus_heart |
Association with transcript: | -2bp_to_ENST00000545155_5end |
EntrezGene: | HSPA6 |
HGNC: | 5239 |
UniProt: | B4DHP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.49e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.49e-28 | 42 |
granulocyte monocyte progenitor cell | 1.09e-24 | 67 |
defensive cell | 7.19e-24 | 48 |
phagocyte | 7.19e-24 | 48 |
myeloid lineage restricted progenitor cell | 3.59e-23 | 66 |
myeloid leukocyte | 2.31e-22 | 72 |
macrophage dendritic cell progenitor | 7.61e-22 | 61 |
monopoietic cell | 3.35e-19 | 59 |
monocyte | 3.35e-19 | 59 |
monoblast | 3.35e-19 | 59 |
promonocyte | 3.35e-19 | 59 |
myeloid cell | 2.21e-15 | 108 |
common myeloid progenitor | 2.21e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 6.06e-12 | 120 |
leukocyte | 1.79e-10 | 136 |
hematopoietic oligopotent progenitor cell | 3.27e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.27e-08 | 161 |
hematopoietic stem cell | 1.56e-07 | 168 |
nongranular leukocyte | 1.99e-07 | 115 |
hematopoietic cell | 9.51e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.29e-21 | 76 |
immune system | 1.67e-19 | 93 |
bone element | 1.27e-18 | 82 |
hematopoietic system | 5.16e-18 | 98 |
blood island | 5.16e-18 | 98 |
hemolymphoid system | 1.32e-16 | 108 |
skeletal element | 3.15e-16 | 90 |
skeletal system | 8.70e-14 | 100 |
lateral plate mesoderm | 8.56e-08 | 203 |
adult organism | 2.57e-07 | 114 |