FFCP PHASE1:Hg19::chr1:202172848..202172894,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19719 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T508 | |||
|association_with_transcript=0bp_to_ENST00000255432,ENST00000367277_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_2_at_LGR6_5end | |||
|id=chr1:202172848..202172894,+ | |||
|ontology_enrichment_celltype=CL:0000625!1.56e-25!11;CL:0000791!3.77e-20!18;CL:0000789!3.77e-20!18;CL:0002420!3.77e-20!18;CL:0002419!3.77e-20!18;CL:0000790!3.77e-20!18;CL:0000084!1.48e-15!25;CL:0000827!1.48e-15!25;CL:0000838!1.02e-12!52;CL:0000542!2.27e-12!53;CL:0000051!2.27e-12!53;CL:0000037!4.06e-12!172;CL:0000566!4.06e-12!172;CL:0000988!7.64e-11!182;CL:0000738!4.07e-10!140;CL:0002032!8.74e-10!165;CL:0000837!8.74e-10!165;CL:0002087!1.14e-09!119;CL:0000623!1.91e-08!3;CL:0000825!1.91e-08!3;CL:0000767!5.27e-08!3;CL:0000842!6.92e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.66e-52;11!CL:0000791;6.66e-43;18!CL:0000789;6.66e-43;18!CL:0002419;6.66e-43;18!CL:0000084;4.39e-30;25!CL:0000623;4.40e-16;3!CL:0000767;3.83e-15;3!CL:0000226;7.11e-15;3!CL:0000842;7.11e-15;3!CL:0000542;1.14e-10;53!CL:0002393;1.74e-07;6!CL:0002397;1.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.47e-52,11;CL:0000791,6.67e-43,18;CL:0000789,6.67e-43,18;CL:0002420,6.67e-43,18;CL:0002419,6.67e-43,18;CL:0000790,6.67e-43,18;CL:0000084,4.40e-30,25;CL:0000827,4.40e-30,25;CL:0000838,1.77e-20,52;CL:0000542,5.08e-20,53;CL:0000051,5.08e-20,53;CL:0000738,8.48e-18,136;CL:0000037,2.69e-17,168;CL:0002087,1.31e-16,115;CL:0000988,4.31e-16,177;CL:0000623,4.40e-16,3;CL:0000825,4.40e-16,3;CL:0000767,3.74e-15,3;CL:0000226,6.63e-15,3;CL:0000842,6.63e-15,3;CL:0002032,5.17e-14,161;CL:0000837,5.17e-14,161;CL:0002031,2.61e-11,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.66e-43;18!CL:0000051;1.14e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.23e-20!15;UBERON:0000179!2.23e-20!15;UBERON:0000463!2.23e-20!15;UBERON:0007023!1.15e-17!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.14e-42;15!UBERON:0000179;1.14e-42;15!UBERON:0000463;1.14e-42;15!UBERON:0002390;8.49e-18;32!UBERON:0002193;5.17e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.08e-42,15;UBERON:0000179,1.08e-42,15;UBERON:0000463,1.08e-42,15;UBERON:0002390,9.91e-10,98;UBERON:0003061,9.91e-10,98;UBERON:0002193,1.13e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,9.97956435052753,3.56077083626975,0,0,0,0,0,0.293600439334847,3.32397245119126,3.81034450193269,2.82114131930607,0,1.29557466407592,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0,1.57204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,2.29932296161153,1.37450978193052,2.53019692019503,4.77848121486145,11.0684187155591,7.60361635558699,6.17357988218868,5.50342427963999,9.99445812418767,6.86654030927649,4.10563998460523,13.1044383096076,8.29064606928873,10.2825326756787,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9743377753465,16.1720681144638,12.9626466642546,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75566460082641,2.80428461064202,6.40365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.55213326462519,5.35246044999663,3.41788312304498,4.52640373369799,2.87953591160336,2.59389324477087,3.24018862342869,3.96562588147135,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,1.82832850090172,0.225595660617181,0.392125068635479,0.335643173951685,0,2.38404868470568,0,0,0,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.427149650270779,0.471612915298998,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,1.27968900727716,0.215166616178029,0,0,0,0,0,0,0.488965776731466,0,0,0.603821380773079,0 | |||
|short_description=p2@LGR6 | |||
}} |
Revision as of 23:23, 10 January 2014
Short description: | p2@LGR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LGR6_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000255432, ENST00000367277_5end |
EntrezGene: | LGR6 |
HGNC: | 19719 |
UniProt: | Q5T508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.47e-52 | 11 |
mature alpha-beta T cell | 6.67e-43 | 18 |
alpha-beta T cell | 6.67e-43 | 18 |
immature T cell | 6.67e-43 | 18 |
mature T cell | 6.67e-43 | 18 |
immature alpha-beta T cell | 6.67e-43 | 18 |
T cell | 4.40e-30 | 25 |
pro-T cell | 4.40e-30 | 25 |
lymphoid lineage restricted progenitor cell | 1.77e-20 | 52 |
lymphocyte | 5.08e-20 | 53 |
common lymphoid progenitor | 5.08e-20 | 53 |
leukocyte | 8.48e-18 | 136 |
hematopoietic stem cell | 2.69e-17 | 168 |
nongranular leukocyte | 1.31e-16 | 115 |
hematopoietic cell | 4.31e-16 | 177 |
natural killer cell | 4.40e-16 | 3 |
pro-NK cell | 4.40e-16 | 3 |
basophil | 3.74e-15 | 3 |
single nucleate cell | 6.63e-15 | 3 |
mononuclear cell | 6.63e-15 | 3 |
hematopoietic oligopotent progenitor cell | 5.17e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.17e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 2.61e-11 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.08e-42 | 15 |
haemolymphatic fluid | 1.08e-42 | 15 |
organism substance | 1.08e-42 | 15 |
hematopoietic system | 9.91e-10 | 98 |
blood island | 9.91e-10 | 98 |
hemolymphoid system | 1.13e-09 | 108 |