FFCP PHASE1:Hg19::chr1:28785607..28785624,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:28785607..28785624,+ | |||
|id=chr1:28785607..28785624,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.44e-30!24;CL:0000071!6.82e-29!18;CL:0002546!6.82e-29!18;CL:0000115!3.47e-27!35;CL:0002078!4.26e-23!44;CL:0000213!1.24e-15!57;CL:0000215!1.24e-15!57;CL:1000413!3.25e-15!9;CL:0002544!8.98e-11!6;CL:0002543!9.27e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.65e-84;18!CL:0002139;2.57e-80;24!CL:0000115;7.00e-57;36!CL:0002078;8.31e-40;45!CL:1000413;1.33e-37;9!CL:0002544;1.81e-29;6!CL:0002543;3.16e-29;6!CL:0000213;1.64e-24;58!CL:0000215;1.64e-24;58!CL:0002618;2.13e-22;3!CL:0002144;3.69e-21;3!CL:0000076;1.29e-13;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.18e-84,18;CL:0002546,1.18e-84,18;CL:0002139,1.93e-80,24;CL:0000115,5.69e-73,36;CL:0002078,1.23e-57,45;CL:0000213,7.00e-44,58;CL:0000215,7.00e-44,58;CL:1000413,1.11e-37,9;CL:0002544,1.87e-29,6;CL:0002543,2.82e-29,6;CL:0002618,1.72e-22,3;CL:0000076,3.90e-22,63;CL:0002144,2.05e-21,3;CL:0000222,4.84e-19,121;CL:0002321,3.98e-07,250;CL:0000066,4.40e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;2.65e-84;18!UBERON:0004872;1.09e-09;7!CL:0000222;6.38e-09;121!UBERON:0004140;4.25e-08;1!UBERON:0005062;1.08e-07;4!UBERON:0007284;1.08e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.82e-29!18;UBERON:0004638!6.82e-29!18;UBERON:0004852!6.82e-29!18;UBERON:0000487!1.93e-22!22;UBERON:0006914!3.55e-21!25;UBERON:0003915!3.25e-15!9;UBERON:0004700!3.25e-15!9;UBERON:0001917!3.25e-15!9;UBERON:0007023!1.46e-14!115;UBERON:0000055!2.09e-11!69;UBERON:0004111!5.04e-11!241;UBERON:0000477!1.64e-10!286;UBERON:0001981!6.97e-10!60;UBERON:0007500!6.97e-10!60;UBERON:0004537!6.97e-10!60;UBERON:0006965!6.97e-10!60;UBERON:0004872!1.63e-09!84;UBERON:0001638!6.34e-09!9;UBERON:0003920!6.34e-09!9;UBERON:0004582!6.34e-09!9;UBERON:0002049!6.64e-09!79;UBERON:0007798!6.64e-09!79;UBERON:0000025!1.11e-08!194;UBERON:0003914!1.05e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.65e-84;18!UBERON:0001986;2.65e-84;18!UBERON:0004852;2.65e-84;18!UBERON:0000487;1.80e-68;22!UBERON:0006914;6.43e-60;25!UBERON:0000490;1.99e-39;33!UBERON:0003915;1.33e-37;9!UBERON:0004700;1.33e-37;9!UBERON:0001917;1.33e-37;9!UBERON:0010523;3.69e-21;3!UBERON:0001915;3.69e-21;3!UBERON:0001982;3.69e-21;3!UBERON:0001638;1.87e-19;9!UBERON:0003920;1.87e-19;9!UBERON:0004582;1.87e-19;9!UBERON:0000055;5.64e-19;65!UBERON:0007500;4.12e-18;56!UBERON:0001981;4.12e-18;56!UBERON:0004537;4.12e-18;56!UBERON:0002066;1.15e-13;5!UBERON:0003914;7.37e-13;74!UBERON:0000025;7.02e-12;93!UBERON:0002049;1.06e-10;75!UBERON:0007798;1.06e-10;75!UBERON:0002106;1.16e-10;3!UBERON:0004535;4.89e-10;109!UBERON:0003978;5.67e-10;3!UBERON:0000946;5.67e-10;3!UBERON:0001009;1.06e-09;112!UBERON:0000947;2.73e-08;21!UBERON:0010191;2.73e-08;21!UBERON:0002135;4.25e-08;1!UBERON:0002146;4.25e-08;1!UBERON:0005623;4.25e-08;1!UBERON:0010260;8.48e-08;9!UBERON:0001637;1.31e-07;42!UBERON:0003509;1.31e-07;42!UBERON:0004572;1.31e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.18e-84,18;UBERON:0001986,1.18e-84,18;UBERON:0004852,1.18e-84,18;UBERON:0000487,9.31e-69,22;UBERON:0006914,3.60e-60,25;UBERON:0003915,1.11e-37,9;UBERON:0004700,1.11e-37,9;UBERON:0001917,1.11e-37,9;UBERON:0000055,6.19e-37,68;UBERON:0007500,9.42e-35,59;UBERON:0001981,9.42e-35,59;UBERON:0004537,9.42e-35,59;UBERON:0006965,9.42e-35,59;UBERON:0004872,3.94e-33,83;UBERON:0002049,1.03e-31,78;UBERON:0007798,1.03e-31,78;UBERON:0003914,1.59e-24,117;UBERON:0004535,4.71e-24,109;UBERON:0001009,2.66e-23,112;UBERON:0010523,2.05e-21,3;UBERON:0001915,2.05e-21,3;UBERON:0001982,2.05e-21,3;UBERON:0001638,1.74e-19,9;UBERON:0003920,1.74e-19,9;UBERON:0004582,1.74e-19,9;UBERON:0004111,7.75e-15,240;UBERON:0000025,9.08e-15,192;UBERON:0003081,8.83e-14,203;UBERON:0002066,1.01e-13,5;UBERON:0002106,1.34e-10,3;UBERON:0004854,1.34e-10,3;UBERON:0009034,1.34e-10,3;UBERON:0002095,1.34e-10,3;UBERON:0004782,1.34e-10,3;UBERON:0003281,1.34e-10,3;UBERON:0009664,1.34e-10,3;UBERON:0002296,1.34e-10,3;UBERON:0005602,1.34e-10,3;UBERON:0001179,1.34e-10,3;UBERON:0006293,1.34e-10,3;UBERON:0000490,2.71e-10,148;UBERON:0003978,5.18e-10,3;UBERON:0009751,5.18e-10,3;UBERON:0000946,5.18e-10,3;UBERON:0002523,5.18e-10,3;UBERON:0005983,5.18e-10,3;UBERON:0002165,5.18e-10,3;UBERON:0002062,5.18e-10,3;UBERON:0007280,5.18e-10,3;UBERON:0003887,1.84e-09,12;UBERON:0002135,2.50e-08,1;UBERON:0000947,2.75e-08,21;UBERON:0010191,2.75e-08,21;UBERON:0002146,6.24e-08,1;UBERON:0005623,6.24e-08,1;UBERON:0010260,7.92e-08,9;UBERON:0000483,1.18e-07,306;UBERON:0000119,1.54e-07,309;UBERON:0001637,1.98e-07,42;UBERON:0003509,1.98e-07,42;UBERON:0004572,1.98e-07,42;UBERON:0000926,2.45e-07,315;UBERON:0004120,2.45e-07,315;UBERON:0006603,2.45e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0.132957960518865,0,0,0,2.78267370313387,3.4409383804245,3.12426451446835,2.26123176769604,0.838998872419812,3.02629846134074,1.8809546988313,0.258416759169329,0,0,2.81980521976403,1.52054421143703,1.95249646038536,2.57364156242108,0.81014194788176,3.57198913136319,3.14341121676638,5.96840846561608,1.53316637465883,0.949265659568129,1.46561395144326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44366447761074,1.38895653772983,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.432359860250884,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.863663664408557,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,1.95497680890578,1.3749625440701,0,0.199679000498991,0,0,1.74677028465488,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,4.55892484789031,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,3.00748537535531,4.06084694233536,0,0,0,0,0,0.458729283404541,0,0.315543124386369,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,1.66645102024618,0,0.124149428591716,0,0.0636471582781649,0.606351566874658,0.870866991587845,1.36893320434112,0.134704106029175,0.286888821570705,0.665320713092027,0,0,0,0.0898252021065869,0,0.611207220914332,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p@chr1:28785607..28785624,+ | |||
}} |
Revision as of 17:26, 10 January 2014
Short description: | p@chr1:28785607..28785624, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:28785607..28785624, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.18e-84 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.18e-84 | 18 |
endothelial cell of vascular tree | 1.93e-80 | 24 |
endothelial cell | 5.69e-73 | 36 |
meso-epithelial cell | 1.23e-57 | 45 |
lining cell | 7.00e-44 | 58 |
barrier cell | 7.00e-44 | 58 |
endothelial cell of artery | 1.11e-37 | 9 |
aortic endothelial cell | 1.87e-29 | 6 |
vein endothelial cell | 2.82e-29 | 6 |
endothelial cell of umbilical vein | 1.72e-22 | 3 |
squamous epithelial cell | 3.90e-22 | 63 |
capillary endothelial cell | 2.05e-21 | 3 |
mesodermal cell | 4.84e-19 | 121 |
embryonic cell | 3.98e-07 | 250 |
epithelial cell | 4.40e-07 | 253 |