FFCP PHASE1:Hg19::chr2:161264430..161264439,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9907 | |||
|TSSclassifier=strong | |||
|UniProt=E7ETU5 | |||
|association_with_transcript=-30bp_to_ENST00000409972,uc002ubl.2_5end | |||
|description=CAGE_peak_7_at_RBMS1_5end | |||
|id=chr2:161264430..161264439,- | |||
|ontology_enrichment_celltype=CL:0000766!2.05e-11!76;CL:0000839!1.14e-10!70;CL:0000557!6.17e-10!71;CL:0002194!1.08e-09!63;CL:0000576!1.08e-09!63;CL:0000040!1.08e-09!63;CL:0000559!1.08e-09!63;CL:0002009!5.97e-09!65;CL:0002057!2.54e-08!42;CL:0000860!5.51e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-11;33!CL:0002057;1.09e-11;33!CL:0000473;3.15e-11;39!CL:0000234;3.15e-11;39!CL:0000576;8.85e-10;48!CL:0000766;5.95e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.07e-18,72;CL:0000839,1.05e-14,66;CL:0002194,1.92e-14,59;CL:0000576,1.92e-14,59;CL:0000040,1.92e-14,59;CL:0000559,1.92e-14,59;CL:0000557,2.32e-14,67;CL:0002009,1.01e-13,61;CL:0000473,4.40e-12,48;CL:0000234,4.40e-12,48;CL:0000860,1.24e-11,42;CL:0002057,1.24e-11,42;CL:0000763,7.99e-10,108;CL:0000049,7.99e-10,108;CL:0000738,3.64e-07,136;CL:0000775,7.40e-07,3;CL:0002619,8.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.34e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.61e-10!112;UBERON:0002390!2.41e-08!102;UBERON:0003061!2.41e-08!102;UBERON:0002405!5.08e-08!115;UBERON:0002371!1.28e-07!80;UBERON:0002204!2.52e-07!167;UBERON:0004765!3.64e-07!101;UBERON:0001434!3.64e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.47e-14,108;UBERON:0002405,8.85e-14,93;UBERON:0004765,2.29e-13,90;UBERON:0002371,6.85e-13,76;UBERON:0001434,7.94e-13,100;UBERON:0002390,1.82e-12,98;UBERON:0003061,1.82e-12,98;UBERON:0001474,1.97e-12,82;UBERON:0002204,3.35e-12,167;UBERON:0003081,1.24e-08,203 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.704772020479856,0,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0.263766978228454,1.11389717664042,1.98838425436749,0,0,0,0,0.123121058076788,0.204000691244253,0,0.85870796139317,0,0.87879847716362,0,0,0,0.393364276848904,0,1.70297735647684,0.919421224478927,0.6024118375565,0,0,0,0,1.10799081706375,2.00544447470142,0.651032612147555,2.91090116511902,1.6194683300949,2.57575567634187,1.59938062657521,1.13362783106643,2.42584061187816,0.697287110717054,0.411167888021826,0,2.8769239232215,2.30544635876191,0.47296445977717,1.03423704220986,0,1.35426486594342,0.941211697713023,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,3.95821560224059,1.19678194572979,1.27867425159808,2.61188314765726,1.13477044938228,1.86846674698672,2.76373531782418,1.0429658368404,0.65156653411535,1.21079900526674,0.368277635987565,1.58231193720442,0.422510572623884,0.637812899895131,0.628975936525128,1.46027220490444,0.901061357049038,0.48217676009124,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0.889509253863555,1.28019066769952,0.800791974072025,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0.382273228125229,1.32171328579026,0,0.790152254325231,0.196709770113833,0.393010762749165,0,0,0.651844533267181,0,0,0.111410456885174,0,0,0.270803863765016,0.384273959177026,0.130059347559878,0.328875809207352,0,0,0.444859689486181,0.267540828089713,1.04535523804977,0.113309342697566,0,0.68725489096526,0.506039384039006,0.318565414324097,0.651083453856419,0.950452044448374,0,0.255973222308837,0,0.473554504088034,0.821127996921047,0.604820229674197,0.802320587350522,0.289648807765598,0,0,0.12786256184353,0,0,0.579386075843295,0,0,0.0945348171640679,0.443458794925128,0.43917392846563,0.327447688744282,0,0.370784442784429,1.9472843619281,0.870648686496336,1.19662164466979,0.238490624305342,0,0.74291500265913,0.39752481473341,0.860234595106124,0.694281003215189,0,0,0.550236083880135,0,1.55050055501597,0.71153252537342,1.00416183829401,0.402829317109147,0.760272105718513,0.976248230192678,0.735326160691737,0,1.3394959242612,0.898117490504679,1.0135033243499,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0.496971951695318,0.759783069987479,0.132409180813219,0.860509862246441,0.709336764396714,0,1.06748995729705,0.24666754841716,1.55605517699883,0.67355336034844,1.47115712802113,0.302714855289863,1.15235184896,0.468642863667593,0.624320153660641,0,0.896692083310806,0.822041490506354,0.485618833104395,0.421352420106746,0.61246251376468,0.368502951935304,1.44656093646072,1.18800285728205,2.22540236350701,2.73048408581408,1.43723628363248,0.841680569770331,0.375355559615893,1.10825646193673,0.438977620880838,0,1.20190447125277,0.340296549480063,0.89694817844431,0.427114777637135,1.05965950579781,0.900273288253207,0.309157587715317,0.257640540045629,0,0.843881661206331,0.292311015483596,0.757301322732344,0.828449087780694,0.484938170456436,0.355009592516614,0.403008392910561,0.169560592310488,0.386521706326594,1.36373060295417,0.860413786167011,0,0.265059536642971,0,0.310983165046111,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0.591534000199219,0.168584690078102,0,0.330881918197182,0,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,1.4763109092493,1.40241773803446,0,1.47008711385542,0,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0.219500570817251,1.1240175325762,0.904760751704678,0.185176890317059,0.977424915930974,0,0,0.34779121492523,1.17408694235822,0.577465791044295,0.462985512576611,0.570762456703795,0,0.858486162094873,0.738651018262192,0.702012795417713,1.33768046059855,0.93733833986777,0,0.283550194484773,0.358234090811393,0,0.383382679165211,4.92663237895944,0.704387472105808,0.829312462163088,0.720599767084807,1.64115163454294,0.444485260045183,1.14596527667483,0,0,0.616964956219941,0,0,0.784917590417525,0,0.7333828582095,0.517086863031111,3.57656445851882,0.845302752556,0.531876233169741,0,0,0,0,0.857867961948885,0,0,0.325736184293735,0,0,0,0,1.79951384127703,4.86495122564762,0.502257091432126,0,0,0,0,0.868687840005475,0.205476322550383,0.895304816199478,0.448340575974109,0.591092280605782,0.431255149719035,0.77005821767849,0,0,0.773288812777695,0,0,1.49801404789436,5.9832291840805,2.90090859405225,1.10422342547226,0.500170521059677,0.271265023699736,1.45579603071565,1.42743191037729,0.315404830067869,0.819989904948992,0,0,0,0.664225598535437,0.184369168541703,1.30325421702124,0,0.343143423810856,0.413536052245775,1.2942852049117,0.960548020230999,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.841980283299221,0.512556597022804,0,0.482561763430822,0,1.54209693802656,0.532685175939381,0.657017248110473,0,0.697262270759755,0.241718899183244,0.40101294060657,0.184161977871793,0.459257792658427,0.546273504020151,0.524497659837696,0.451199612907412,0.385076685522074,0,0,0.211103257785751,0,0.850468526382578,0.431831832204279,0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| |||
|short_description=p7@RBMS1 | |||
}} |
Revision as of 06:15, 21 January 2014
Short description: | p7@RBMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RBMS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000409972, uc002ubl.2_5end |
EntrezGene: | RBMS1 |
HGNC: | 9907 |
UniProt: | E7ETU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.07e-18 | 72 |
myeloid lineage restricted progenitor cell | 1.05e-14 | 66 |
monopoietic cell | 1.92e-14 | 59 |
monocyte | 1.92e-14 | 59 |
monoblast | 1.92e-14 | 59 |
promonocyte | 1.92e-14 | 59 |
granulocyte monocyte progenitor cell | 2.32e-14 | 67 |
macrophage dendritic cell progenitor | 1.01e-13 | 61 |
defensive cell | 4.40e-12 | 48 |
phagocyte | 4.40e-12 | 48 |
classical monocyte | 1.24e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-11 | 42 |
myeloid cell | 7.99e-10 | 108 |
common myeloid progenitor | 7.99e-10 | 108 |
leukocyte | 3.64e-07 | 136 |
neutrophil | 7.40e-07 | 3 |
adult endothelial progenitor cell | 8.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.47e-14 | 108 |
immune system | 8.85e-14 | 93 |
skeletal element | 2.29e-13 | 90 |
bone marrow | 6.85e-13 | 76 |
skeletal system | 7.94e-13 | 100 |
hematopoietic system | 1.82e-12 | 98 |
blood island | 1.82e-12 | 98 |
bone element | 1.97e-12 | 82 |
musculoskeletal system | 3.35e-12 | 167 |
lateral plate mesoderm | 1.24e-08 | 203 |