FFCP PHASE1:Mm9::chr11:117093174..117093204,+: Difference between revisions
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{{FFCP|EntrezGene=53860|HGNC=|UniProt=A2A6U3|association_with_transcript=-394bp_to_ENSMUST00000106354_5end|description=CAGE_peak_25_at_Sept9_5end|id=chr11:117093174..117093204,+|ontology_enrichment_celltype=CL:0000333!1.03e-09!10;CL:0000095!1.03e-09!10;CL:0000243!1.03e-09!10;CL:0000123!1.03e-09!10;CL:0000125!1.03e-09!10;CL:0000030!1.03e-09!10;CL:0000339!1.03e-09!10;CL:0002453!1.14e-07!8;CL:0000680!8.42e-07!6;CL:0000183!8.42e-07!6;CL:0000187!8.42e-07!6;CL:0000056!8.42e-07!6|ontology_enrichment_celltype_v019_2=CL:0000217,3.36e-14,2;CL:0000328,3.36e-14,2;CL:0002573,3.36e-14,2;CL:0002376,3.36e-14,2;CL:0000218,3.36e-14,2;CL:0000692,3.36e-14,2;CL:0002377,3.36e-14,2;CL:0002375,3.36e-14,2;CL:0000708,3.90e-14,2;CL:0000333,1.98e-10,10;CL:0000095,1.98e-10,10;CL:0000243,1.98e-10,10;CL:0000123,1.98e-10,10;CL:0000125,1.98e-10,10;CL:0000030,1.98e-10,10;CL:0000339,1.98e-10,10;CL:0000680,6.30e-10,6;CL:0000187,6.30e-10,6;CL:0000056,6.30e-10,6;CL:0000215,9.04e-10,3;CL:0000151,9.97e-10,3;CL:0000499,9.97e-10,3;CL:0000327,9.97e-10,3;CL:0002494,2.17e-09,3;CL:0000737,2.17e-09,3;CL:0000746,2.17e-09,3;CL:0000513,2.17e-09,3;CL:0000222,1.38e-08,7;CL:0000355,8.66e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.21e-20,3;UBERON:0000478,6.21e-20,3;UBERON:0000158,6.21e-20,3;UBERON:0005795,6.36e-15,4;UBERON:0000995,6.36e-15,4;UBERON:0003210,3.90e-14,2;UBERON:0001987,7.05e-14,2;UBERON:0003124,7.05e-14,2;UBERON:0004340,7.05e-14,2;UBERON:0003975,4.65e-12,5;UBERON:0003134,9.77e-08,8;UBERON:0000305,9.86e-08,1;UBERON:0006834,1.78e-07,1;UBERON:0004175,6.25e-07,9;UBERON:0000474,6.25e-07,9;UBERON:0001134,8.66e-07,9;UBERON:0002036,8.66e-07,9;UBERON:0002385,8.66e-07,9;UBERON:0000486,8.66e-07,9;UBERON:0007503,8.66e-07,9;UBERON:0001015,8.66e-07,9;UBERON:0002329,8.66e-07,9;UBERON:0003082,8.66e-07,9;UBERON:0003059,8.66e-07,9;UBERON:0007282,8.66e-07,9;UBERON:0004290,8.66e-07,9;UBERON:0009618,8.66e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.506884656097573,1.28482726513177,0.782391344348039,0.436050312760893,0.659058548203415,0.777719596297134,1.81982348112971,1.43752564364972,0,0,0,3.8588915405392,0.573066879877513,3.09403255366465,0,0,0,5.42151251310611,5.33576877666684,0.899899717281399,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,8.32988126665025,4.91215140694106,0,0,0,0,0,0,0.140444420131752,1.02258193546835,0.519572009205738,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,4.44950941921873,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0.536546802799238,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.491804836130026,0.252470927204373,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.790575555893047,0,0.425820255624806,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,2.58138878870081,8.04961869282517,0.220528398054962,0.49465875882444,0.484393280087717,0.120625849856312,0,0.492422699235184,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,1.87682475451182,0.549454872801795,0.643105137237198,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.952587382566147,0,0,0.412085900803307,0,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0.463735671240843|short_description=p25@Sept9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53860 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2A6U3 | |||
|association_with_transcript=-394bp_to_ENSMUST00000106354_5end | |||
|cluster_id=chr11:117093174..117093204,+ | |||
|description=CAGE_peak_25_at_Sept9_5end | |||
|id=chr11:117093174..117093204,+ | |||
|ontology_enrichment_celltype=CL:0000333!1.03e-09!10;CL:0000095!1.03e-09!10;CL:0000243!1.03e-09!10;CL:0000123!1.03e-09!10;CL:0000125!1.03e-09!10;CL:0000030!1.03e-09!10;CL:0000339!1.03e-09!10;CL:0002453!1.14e-07!8;CL:0000680!8.42e-07!6;CL:0000183!8.42e-07!6;CL:0000187!8.42e-07!6;CL:0000056!8.42e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,3.36e-14,2;CL:0000328,3.36e-14,2;CL:0002573,3.36e-14,2;CL:0002376,3.36e-14,2;CL:0000218,3.36e-14,2;CL:0000692,3.36e-14,2;CL:0002377,3.36e-14,2;CL:0002375,3.36e-14,2;CL:0000708,3.90e-14,2;CL:0000333,1.98e-10,10;CL:0000095,1.98e-10,10;CL:0000243,1.98e-10,10;CL:0000123,1.98e-10,10;CL:0000125,1.98e-10,10;CL:0000030,1.98e-10,10;CL:0000339,1.98e-10,10;CL:0000680,6.30e-10,6;CL:0000187,6.30e-10,6;CL:0000056,6.30e-10,6;CL:0000215,9.04e-10,3;CL:0000151,9.97e-10,3;CL:0000499,9.97e-10,3;CL:0000327,9.97e-10,3;CL:0002494,2.17e-09,3;CL:0000737,2.17e-09,3;CL:0000746,2.17e-09,3;CL:0000513,2.17e-09,3;CL:0000222,1.38e-08,7;CL:0000355,8.66e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.21e-20,3;UBERON:0000478,6.21e-20,3;UBERON:0000158,6.21e-20,3;UBERON:0005795,6.36e-15,4;UBERON:0000995,6.36e-15,4;UBERON:0003210,3.90e-14,2;UBERON:0001987,7.05e-14,2;UBERON:0003124,7.05e-14,2;UBERON:0004340,7.05e-14,2;UBERON:0003975,4.65e-12,5;UBERON:0003134,9.77e-08,8;UBERON:0000305,9.86e-08,1;UBERON:0006834,1.78e-07,1;UBERON:0004175,6.25e-07,9;UBERON:0000474,6.25e-07,9;UBERON:0001134,8.66e-07,9;UBERON:0002036,8.66e-07,9;UBERON:0002385,8.66e-07,9;UBERON:0000486,8.66e-07,9;UBERON:0007503,8.66e-07,9;UBERON:0001015,8.66e-07,9;UBERON:0002329,8.66e-07,9;UBERON:0003082,8.66e-07,9;UBERON:0003059,8.66e-07,9;UBERON:0007282,8.66e-07,9;UBERON:0004290,8.66e-07,9;UBERON:0009618,8.66e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.506884656097573,1.28482726513177,0.782391344348039,0.436050312760893,0.659058548203415,0.777719596297134,1.81982348112971,1.43752564364972,0,0,0,3.8588915405392,0.573066879877513,3.09403255366465,0,0,0,5.42151251310611,5.33576877666684,0.899899717281399,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,8.32988126665025,4.91215140694106,0,0,0,0,0,0,0.140444420131752,1.02258193546835,0.519572009205738,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,4.44950941921873,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0.536546802799238,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.491804836130026,0.252470927204373,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.790575555893047,0,0.425820255624806,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,2.58138878870081,8.04961869282517,0.220528398054962,0.49465875882444,0.484393280087717,0.120625849856312,0,0.492422699235184,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,1.87682475451182,0.549454872801795,0.643105137237198,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.952587382566147,0,0,0.412085900803307,0,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0.463735671240843 | |||
|short_description=p25@Sept9 | |||
}} |
Revision as of 12:47, 5 August 2015
Short description: | p25@Sept9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_Sept9_5end |
Coexpression cluster: | NA |
Association with transcript: | -394bp_to_ENSMUST00000106354_5end |
EntrezGene: | 53860 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 3.36e-14 | 2 |
myelin accumulating cell | 3.36e-14 | 2 |
Schwann cell | 3.36e-14 | 2 |
non-myelinating Schwann cell | 3.36e-14 | 2 |
myelinating Schwann cell;;Schwann cell | 3.36e-14 | 2 |
terminal Schwann cell | 3.36e-14 | 2 |
immature Schwann cell | 3.36e-14 | 2 |
Schwann cell precursor | 3.36e-14 | 2 |
leptomeningeal cell | 3.90e-14 | 2 |
migratory neural crest cell | 1.98e-10 | 10 |
neuron associated cell | 1.98e-10 | 10 |
glial cell (sensu Vertebrata) | 1.98e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 1.98e-10 | 10 |
glial cell | 1.98e-10 | 10 |
glioblast | 1.98e-10 | 10 |
glioblast (sensu Vertebrata) | 1.98e-10 | 10 |
muscle precursor cell | 6.30e-10 | 6 |
muscle cell | 6.30e-10 | 6 |
myoblast | 6.30e-10 | 6 |
barrier cell | 9.04e-10 | 3 |
secretory cell | 9.97e-10 | 3 |
stromal cell | 9.97e-10 | 3 |
extracellular matrix secreting cell | 9.97e-10 | 3 |
cardiocyte | 2.17e-09 | 3 |
striated muscle cell | 2.17e-09 | 3 |
cardiac muscle cell | 2.17e-09 | 3 |
cardiac muscle myoblast | 2.17e-09 | 3 |
mesodermal cell | 1.38e-08 | 7 |
multi-potent skeletal muscle stem cell | 8.66e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.21e-20 | 3 |
extraembryonic structure | 6.21e-20 | 3 |
membranous layer | 6.21e-20 | 3 |
embryonic uterus | 6.36e-15 | 4 |
uterus | 6.36e-15 | 4 |
blood-cerebrospinal fluid barrier | 3.90e-14 | 2 |
placenta | 7.05e-14 | 2 |
chorion | 7.05e-14 | 2 |
allantois | 7.05e-14 | 2 |
internal female genitalia | 4.65e-12 | 5 |
female reproductive organ | 9.77e-08 | 8 |
amnion | 9.86e-08 | 1 |
uterus or analog | 1.78e-07 | 1 |
internal genitalia | 6.25e-07 | 9 |
female reproductive system | 6.25e-07 | 9 |
skeletal muscle tissue | 8.66e-07 | 9 |
striated muscle tissue | 8.66e-07 | 9 |
muscle tissue | 8.66e-07 | 9 |
multilaminar epithelium | 8.66e-07 | 9 |
epithelial vesicle | 8.66e-07 | 9 |
musculature | 8.66e-07 | 9 |
somite | 8.66e-07 | 9 |
myotome | 8.66e-07 | 9 |
presomitic mesoderm | 8.66e-07 | 9 |
presumptive segmental plate | 8.66e-07 | 9 |
dermomyotome | 8.66e-07 | 9 |
trunk paraxial mesoderm | 8.66e-07 | 9 |